RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 MS4A6EQ96DS6 147 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 FAM120BQ96EK7 910 aaKnown RBP13.14□□□□□ -0.31
TPM1-215ENST00000558868 PHF12Q96QT6 1004 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 SPATA9Q9BWV2 254 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 ZNF717Q9BY31 904 aaPredicted RBP13.14□□□□□ -0.31
TPM1-215ENST00000558868 ZNF282Q9UDV7 671 aaPredicted RBP13.14□□□□□ -0.31
TPM1-215ENST00000558868 SUSD2Q9UGT4 822 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 EGFL7Q9UHF1 273 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 AP4S1Q9Y587 144 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 GMEB1Q9Y692 573 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 CSNK1G3Q9Y6M4 447 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 HEATR5BQ9P2D3 2071 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 A0A0A6YYD5 115 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 A0A1B0GTW7 788 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 ELOVL7A1L3X0 281 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 H3BNX3 289 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 ERI3O43414 337 aaKnown RBP13.13□□□□□ -0.31
TPM1-215ENST00000558868 KLHL18O94889 574 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 SCELO95171 688 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 HOXB6P17509 224 aaKnown RBP13.13□□□□□ -0.31
TPM1-215ENST00000558868 MAGP20916 626 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 ZNF10P21506 573 aaPredicted RBP13.13□□□□□ -0.31
TPM1-215ENST00000558868 IL10P22301 178 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 PSMA4P25789 261 aaKnown RBP13.13□□□□□ -0.31
TPM1-215ENST00000558868 PTPN6P29350 595 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 FNTBP49356 437 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 CSNK1EP49674 416 aaKnown RBP13.13□□□□□ -0.31
TPM1-215ENST00000558868 PLA2G16P53816 162 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 DMWDQ09019 674 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 SELPLGQ14242 412 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 MANEAQ5SRI9 462 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 GLYATQ6IB77 296 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 ANKRD26P1Q6NSI1 321 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 ERICH5Q6P6B1 374 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 ABHD17CQ6PCB6 329 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 OGFOD3Q6PK18 319 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 CYP2R1Q6VVX0 501 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 UBE3DQ7Z6J8 389 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 PQLC1Q8N2U9 271 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 ZCCHC7Q8N3Z6 543 aaKnown RBP13.13□□□□□ -0.31
TPM1-215ENST00000558868 ARL14Q8N4G2 192 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 FAM47BQ8NA70 645 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 OR4A15Q8NGL6 344 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 BAHD1Q8TBE0 780 aaPredicted RBP13.13□□□□□ -0.31
TPM1-215ENST00000558868 GAL3ST3Q96A11 431 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 RERGQ96A58 199 aaPredicted RBP13.13□□□□□ -0.31
TPM1-215ENST00000558868 MIEF2Q96C03 454 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 NSMCE2Q96MF7 247 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 ZNF583Q96ND8 569 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 C17orf62Q9BQA9 187 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 SORBS1Q9BX66 1292 aaKnown RBP13.13□□□□□ -0.31
TPM1-215ENST00000558868 SLC6A16Q9GZN6 736 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 ABCG4Q9H172 646 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 RAD21L1Q9H4I0 556 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 KAT8Q9H7Z6 458 aaKnown RBP13.13□□□□□ -0.31
TPM1-215ENST00000558868 COPS7BQ9H9Q2 264 aaPredicted RBP13.13□□□□□ -0.31
TPM1-215ENST00000558868 LYARQ9NX58 379 aaKnown RBP13.13□□□□□ -0.31
TPM1-215ENST00000558868 EHD3Q9NZN3 535 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 EXO1Q9UQ84 846 aaKnown RBP13.13□□□□□ -0.31
TPM1-215ENST00000558868 NEUROG3Q9Y4Z2 214 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 CEP192Q8TEP8 1941 aa13.13□□□□□ -0.31
TPM1-215ENST00000558868 A0A1W2PRB8 838 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 DHRS12A0PJE2 317 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 CLIC1O00299 241 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 RTCAO00442 366 aaKnown RBP13.12□□□□□ -0.31
TPM1-215ENST00000558868 PIAS2O75928 621 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 UBXN7O94888 489 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 GSNP06396 782 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 FAM58BPP0C7Q3 252 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 ENGP17813 658 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 GGT1P19440 569 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 ATP6V1B2P21281 511 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 HIST1H1TP22492 207 aaPredicted RBP13.12□□□□□ -0.31
TPM1-215ENST00000558868 CDKN2CP42773 168 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 MAZP56270 477 aaKnown RBP13.12□□□□□ -0.31
TPM1-215ENST00000558868 POLE2P56282 527 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 HYAL2Q12891 473 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 GTDC1Q4AE62 458 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 FCRL6Q6DN72 434 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 FBXO42Q6P3S6 717 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 SERPINA11Q86U17 422 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 TRIM73Q86UV7 250 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 C17orf82Q86X59 251 aaPredicted RBP13.12□□□□□ -0.31
TPM1-215ENST00000558868 CALHM3Q86XJ0 350 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 TICAM1Q8IUC6 712 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 SPPL2CQ8IUH8 684 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 MICU2Q8IYU8 434 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 CATSPER1Q8NEC5 780 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 OR52E4Q8NGH9 312 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 OR10A6Q8NH74 314 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 RSC1A1Q92681 617 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 TM4SF19Q96DZ7 209 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 REXO5Q96IC2 774 aaKnown RBP13.12□□□□□ -0.31
TPM1-215ENST00000558868 SLC38A3Q99624 504 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 ZFYVE21Q9BQ24 234 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 NLNQ9BYT8 704 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 TRIM8Q9BZR9 551 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 SEMA6CQ9H3T2 930 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 GORASP2Q9H8Y8 452 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 LHX9Q9NQ69 397 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms