RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, human

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-222	ENST00000543627	CA13	Q8N1Q1	262 aa		10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	AFAP1L2	Q8N4X5	818 aa		10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	FAM47B	Q8NA70	645 aa		10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	OR7G3	Q8NG95	312 aa		10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	TRPC4AP	Q8TEL6	797 aa		10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	UBTD2	Q8WUN7	234 aa		10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	TSLP	Q969D9	159 aa		10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	ISL2	Q96A47	359 aa		10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	CNDP1	Q96KN2	507 aa		10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	AGAP4	Q96P64	663 aa		10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	SORBS1	Q9BX66	1292 aa	Known RBP	10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	PARD6B	Q9BYG5	372 aa		10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	PITHD1	Q9GZP4	211 aa	Predicted RBP	10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	AICDA	Q9GZX7	198 aa		10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	LHPP	Q9H008	270 aa		10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	ZBTB20	Q9HC78	741 aa	Predicted RBP	10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	SLAMF7	Q9NQ25	335 aa		10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	C19orf25	Q9UFG5	118 aa	Predicted RBP	10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	DCDC2	Q9UHG0	476 aa		10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	TMCO1	Q9UM00	188 aa		10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	PCDHGA9	Q9Y5G4	932 aa	Known RBP	10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	KALRN	O60229	2985 aa		10.42	□□□□□ -0.74
DDB1-222	ENST00000543627	IGHV1-45	A0A0A0MS14	117 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	CCDC189	A1A4V9	331 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627		A8MT66	165 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	E2F3	O00716	465 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	OR7A17	O14581	309 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	SUV39H1	O43463	412 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	KLK8	O60259	260 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	DPM1	O60762	260 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	F10	P00742	488 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	SMIM10L1	P0DMW3	83 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	MAOA	P21397	527 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	GSTM2	P28161	218 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	DEK	P35659	375 aa	Known RBP	10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	SSR2	P43308	183 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	ST13	P50502	369 aa	Known RBP	10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	EFNA3	P52797	238 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	MTTP	P55157	894 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	MLLT10	P55197	1068 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	RPS13	P62277	151 aa	Known RBP	10.41	□□□□□ -0.74
DDB1-222	ENST00000543627		Q0VFX4	171 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	SLC13A2	Q13183	592 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	ZRSR2	Q15696	482 aa	Known RBP	10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	SFT2D3	Q587I9	215 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	VWA5B1	Q5TIE3	1220 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	LIPJ	Q5W064	366 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	ANKRD37	Q7Z713	158 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	CLNK	Q7Z7G1	428 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	C4orf33	Q8N1A6	199 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	ZADH2	Q8N4Q0	377 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	CCNYL1	Q8N7R7	359 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	OR2L5	Q8NG80	312 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	OR52B6	Q8NGF0	335 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	HUS1B	Q8NHY5	278 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	BRIX1	Q8TDN6	353 aa	Known RBP	10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	ZNF473	Q8WTR7	871 aa	Known RBP	10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	SREK1	Q8WXA9	508 aa	Known RBP	10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	NACC2	Q96BF6	587 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	REPS1	Q96D71	796 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	WDR34	Q96EX3	536 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	CMTM7	Q96FZ5	175 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	SMIM10	Q96HG1	83 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	CENPK	Q9BS16	269 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	ZNF552	Q9H707	407 aa	Predicted RBP	10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	PNO1	Q9NRX1	252 aa	Known RBP	10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	RIC8B	Q9NVN3	520 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	FBXW2	Q9UKT8	454 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	PCDHGA11	Q9Y5H2	935 aa		10.41	□□□□□ -0.74
DDB1-222	ENST00000543627	MAGEB17	A8MXT2	336 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	STX16-NPEPL1	H3BU86	382 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	PPP6C	O00743	305 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	COPE	O14579	308 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	STX16	O14662	325 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	DLX3	O60479	287 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	KLHL41	O60662	606 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	CEACAM4	O75871	244 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	SBK3	P0C264	359 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	ITGAM	P11215	1152 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	PLA2G2A	P14555	144 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	KRT4	P19013	534 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	IL10	P22301	178 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	CASP2	P42575	452 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	CCT5	P48643	541 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	RHAG	Q02094	409 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	TLE1	Q04724	770 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	IFT88	Q13099	833 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	SLAMF1	Q13291	335 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	PCOLCE	Q15113	449 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	IGFBP7	Q16270	282 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	FAM219B	Q5XKK7	198 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	B3GNTL1	Q67FW5	361 aa	Predicted RBP	10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	FCRLB	Q6BAA4	426 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	ABHD17C	Q6PCB6	329 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	PAPD4	Q6PIY7	484 aa	Known RBP	10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	TMEM205	Q6UW68	189 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	LAS2	Q8IYD9	372 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	EFCAB3	Q8N7B9	438 aa		10.4	□□□□□ -0.74
DDB1-222	ENST00000543627	PLPP5	Q8NEB5	264 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms