RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 FAM47BQ8NA70 645 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 OR4K2Q8NGD2 314 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 UTP15Q8TED0 518 aaKnown RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 ASB12Q8WXK4 309 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 SMARCD2Q92925 531 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 MYADMQ96S97 322 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 SPIN2AQ99865 258 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 SPIN2BQ9BPZ2 258 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 PARPBPQ9NWS1 579 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 KLF15Q9UIH9 416 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 A0A0G2JMP0 313 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 ZNF208O43345 1280 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 BRINP1O60477 761 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 NME6O75414 186 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 HEXAP06865 529 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 TFE3P19532 575 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 SPIBQ01892 262 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 RPL6Q02878 288 aaKnown RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 MTF1Q14872 753 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 PTCHD3Q3KNS1 767 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 MORN1Q5T089 497 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 SLC43A3Q8NBI5 491 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 OR4M2Q8NGB6 313 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 SAV1Q9H4B6 383 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 NSUN3Q9H649 340 aaKnown RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 SEC61A2Q9H9S3 476 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 PIH1D1Q9NWS0 290 aaKnown RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 HS3ST3A1Q9Y663 406 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 TRAPPC13A5PLN9 417 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 IFNA7P01567 189 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 GALTP07902 379 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 ANXA4P09525 319 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 CD53P19397 219 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 RAB28P51157 221 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 DAP3P51398 398 aaKnown RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 CLEC20AQ6ZU45 233 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 USP49Q70CQ1 688 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 ZNF367Q7RTV3 350 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 TAF8Q7Z7C8 310 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 SATL1Q86VE3 508 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 WDR92Q96MX6 357 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 TTYH2Q9BSA4 534 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 CCDC32Q9BV29 185 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 DUSP26Q9BV47 211 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 SMOXQ9NWM0 555 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 DLGAP2Q9P1A6 1054 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 A0A1W2PQH9 124 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 FOXO6A8MYZ6 492 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 CLDN25C9JDP6 229 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 E7ENX8 843 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 NEDD8-MDP1E9PL57 170 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 ZNF670-ZNF695F2Z2N8 137 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 PRAF2O60831 178 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 SYNGR4O95473 234 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 H1F0P07305 194 aaKnown RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 SAGP10523 405 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 CTSAP10619 480 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 GP1BBP13224 206 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 EPORP19235 508 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 CD82P27701 267 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 ABRAXAS2Q15018 415 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 IRF4Q15306 451 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 CD300LGQ6UXG3 332 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 IZUMO2Q6UXV1 221 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 ZNF704Q6ZNC4 412 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 DCDC5Q6ZRR9 648 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 TMPRSS11BQ86T26 416 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 CMTM8Q8IZV2 173 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 ZNF548Q8NEK5 533 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 CRYGNQ8WXF5 182 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 A0A0G2JPF8 293 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 FAM196BA6NMK8 535 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 HNRNPCL3B7ZW38 293 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 SNPHO15079 494 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 NDUFB5O43674 189 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 RNASEH2AO75792 299 aaKnown RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 SEC24AO95486 1093 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 DBIP07108 87 aaKnown RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 PDHA1P08559 390 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 HNRNPCL4P0DMR1 293 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 FPR1P21462 350 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 RPL4P36578 427 aaKnown RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 EPHA4P54764 986 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 BST1Q10588 318 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 OASLQ15646 514 aaKnown RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 ZNF181Q2M3W8 571 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 C22orf39Q6P5X5 142 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 LCTLQ6UWM7 567 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 ZNF595Q8IYB9 648 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 MAGEE2Q8TD90 523 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 S100A16Q96FQ6 103 aaKnown RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 KLHDC7BQ96G42 594 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 ZBED3Q96IU2 234 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 TPD52L3Q96J77 140 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 KREMEN1Q96MU8 473 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 NODALQ96S42 347 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 GPN2Q9H9Y4 310 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 MARCOQ9UEW3 520 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 ACOX3O15254 700 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 KHDRBS3O75525 346 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms