RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 CCNB2O95067 398 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 SOX14O95416 240 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 RECKO95980 971 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 RPLP2P05387 115 aaKnown RBP11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 CHRM5P08912 532 aaPredicted RBP11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 CYP2A7P20853 494 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 KRR1Q13601 381 aaKnown RBP11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 FAM214AQ32MH5 1076 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 CDKL4Q5MAI5 379 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 IER5LQ5T953 404 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 UBE2J2Q8N2K1 259 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 ASCC1Q8N9N2 400 aaKnown RBP11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 VPS35Q96QK1 796 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 SLC35A5Q9BS91 424 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 CCDC32Q9BV29 185 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 CDCA4Q9BXL8 241 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 ABCB8Q9NUT2 735 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 DNAJC27Q9NZQ0 273 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 FTSJ1Q9UET6 329 aa11.25□□□□□ -0.61
PDZRN3-203ENST00000462146 OBSL1O75147 1896 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 A0A1W2PQ09 198 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 MGAT4DA6NG13 374 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 ARHGEF33A8MVX0 844 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 PLK4O00444 970 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 CSO75390 466 aaKnown RBP11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 FHP07954 510 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 CD70P32970 193 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 BDKRB1P46663 353 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 DAB2P98082 770 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 NAE1Q13564 534 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 PRSS53Q2L4Q9 553 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 Q5BKY6 102 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 SNAP47Q5SQN1 464 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 ZNF783Q6ZMS7 281 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 GALNT12Q8IXK2 581 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 CBARPQ8N350 705 aaPredicted RBP11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 FYTTD1Q96QD9 318 aaKnown RBP11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 TMEM246Q9BRR3 403 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 BRD9Q9H8M2 597 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 ZNF556Q9HAH1 456 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 NMNAT1Q9HAN9 279 aaPredicted RBP11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 TMEM161AQ9NX61 479 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 PAQR5Q9NXK6 330 aaPredicted RBP11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 SERTM1A2A2V5 107 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 EFCAB10A6NFE3 127 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 LRRTM2O43300 516 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 GREM1O60565 184 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 GALTP07902 379 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 SRCP12931 536 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 ZNF8P17098 575 aaPredicted RBP11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 CBLP22681 906 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 CDC42P60953 191 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 RPS13P62277 151 aaKnown RBP11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 CDK10Q15131 360 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 TEAD4Q15561 434 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 MPEG1Q2M385 716 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 ARMC4Q5T2S8 1044 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 LIPJQ5W064 366 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 PLAG1Q6DJT9 500 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 RNF130Q86XS8 419 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 SLC44A2Q8IWA5 706 aaPredicted RBP11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 HS6ST3Q8IZP7 471 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 ARL14EPQ8N8R7 260 aaPredicted RBP11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 HJURPQ8NCD3 748 aaPredicted RBP11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 HUS1BQ8NHY5 278 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 SCAMP4Q969E2 229 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 PHOX2BQ99453 314 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 RERGLQ9H628 205 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 NPAP1Q9NZP6 1156 aa11.24□□□□□ -0.61
PDZRN3-203ENST00000462146 MEIOCA2RUB1 952 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 ZAR1LA6NP61 321 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 GADD45GO95257 159 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 IL7P13232 177 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 XCR1P46094 333 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 LIMS1P48059 325 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 LMAN2Q12907 356 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 GCNT6Q5T4J0 391 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 TPRG1Q6ZUI0 275 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 DEPDC7Q96QD5 511 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 PKP4Q99569 1192 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 SPATA9Q9BWV2 254 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 RANGRFQ9HD47 186 aaPredicted RBP11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 ZNF282Q9UDV7 671 aaPredicted RBP11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 TRAPPC4Q9Y296 219 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 CKAP5Q14008 2032 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 IGLV3-16A0A075B6K0 115 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 TRBV4-1A0A0J9YWV2 114 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 H7C4K7 107 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 SCO2O43819 266 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 SOCS5O75159 536 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 ATP1B2P14415 290 aaPredicted RBP11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 CD72P21854 359 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 SERPINA4P29622 427 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 OPRD1P41143 372 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 PREPP48147 710 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 C21orf58P58505 322 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 TAF12Q16514 161 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 TCTN1Q2MV58 587 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 RPS26P11Q5JNZ5 115 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms