RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 PFDN4Q9NQP4 134 aa17.73■□□□□ 0.43
TSSC4-201ENST00000333256 RIC8BQ9NVN3 520 aa17.73■□□□□ 0.43
TSSC4-201ENST00000333256 C1orf109Q9NX04 203 aa17.73■□□□□ 0.43
TSSC4-201ENST00000333256 WASF3Q9UPY6 502 aa17.73■□□□□ 0.43
TSSC4-201ENST00000333256 POLR3HQ9Y535 204 aaPredicted RBP17.73■□□□□ 0.43
TSSC4-201ENST00000333256 DSCR3O14972 297 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 STK17BO94768 372 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 SEMA3DO95025 777 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 TGDSO95455 350 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 KLK1P06870 262 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 TROVE2P10155 538 aaKnown RBP eCLIP17.72■□□□□ 0.43
TSSC4-201ENST00000333256 ALOX15P16050 662 aaPredicted RBP17.72■□□□□ 0.43
TSSC4-201ENST00000333256 SLC5A2P31639 672 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 IDH3AP50213 366 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 EMP3P54852 163 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 MAT1AQ00266 395 aaKnown RBP17.72■□□□□ 0.43
TSSC4-201ENST00000333256 TGM3Q08188 693 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 FAM53BQ14153 422 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 SYT16Q17RD7 645 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 C6orf136Q5SQH8 315 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 NXNQ6DKJ4 435 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 ACOT4Q8N9L9 421 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 SRFBP1Q8NEF9 429 aaKnown RBP17.72■□□□□ 0.43
TSSC4-201ENST00000333256 QRFPRQ96P65 431 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 ZPBPQ9BS86 351 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 TBCDQ9BTW9 1192 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 C1orf50Q9BV19 199 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 AKIRIN1Q9H9L7 192 aaPredicted RBP17.72■□□□□ 0.43
TSSC4-201ENST00000333256 KCNK13Q9HB14 408 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 PCDHGA3Q9Y5H0 932 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 AK5Q9Y6K8 562 aa17.72■□□□□ 0.43
TSSC4-201ENST00000333256 SCN3AQ9NY46 2000 aa17.71■□□□□ 0.43
TSSC4-201ENST00000333256 TRABD2BA6NFA1 517 aa17.71■□□□□ 0.43
TSSC4-201ENST00000333256 ITGAXP20702 1163 aa17.71■□□□□ 0.43
TSSC4-201ENST00000333256 DRD4P21917 467 aa17.71■□□□□ 0.43
TSSC4-201ENST00000333256 HIST1H1TP22492 207 aaPredicted RBP17.71■□□□□ 0.43
TSSC4-201ENST00000333256 ATP5A1P25705 553 aaKnown RBP17.71■□□□□ 0.43
TSSC4-201ENST00000333256 RBMS1P29558 406 aaKnown RBP17.71■□□□□ 0.43
TSSC4-201ENST00000333256 RAE1P78406 368 aaKnown RBP17.71■□□□□ 0.43
TSSC4-201ENST00000333256 KIAA0040Q15053 153 aa17.71■□□□□ 0.43
TSSC4-201ENST00000333256 HOMEZQ8IX15 550 aa17.71■□□□□ 0.43
TSSC4-201ENST00000333256 FNDC5Q8NAU1 212 aa17.71■□□□□ 0.43
TSSC4-201ENST00000333256 GALNT6Q8NCL4 622 aa17.71■□□□□ 0.43
TSSC4-201ENST00000333256 GBP5Q96PP8 586 aa17.71■□□□□ 0.43
TSSC4-201ENST00000333256 AHSPQ9NZD4 102 aa17.71■□□□□ 0.43
TSSC4-201ENST00000333256 HCN3Q9P1Z3 774 aa17.71■□□□□ 0.43
TSSC4-201ENST00000333256 DLGAP4Q9Y2H0 992 aa17.71■□□□□ 0.43
TSSC4-201ENST00000333256 NSA2O95478 260 aaKnown RBP17.71■□□□□ 0.42
TSSC4-201ENST00000333256 PRPH2P23942 346 aa17.71■□□□□ 0.42
TSSC4-201ENST00000333256 TPP2P29144 1249 aaPredicted RBP17.71■□□□□ 0.42
TSSC4-201ENST00000333256 AVPR1BP47901 424 aa17.71■□□□□ 0.42
TSSC4-201ENST00000333256 MTTPP55157 894 aa17.71■□□□□ 0.42
TSSC4-201ENST00000333256 SPIN4Q56A73 249 aa17.71■□□□□ 0.42
TSSC4-201ENST00000333256 YOD1Q5VVQ6 348 aaPredicted RBP17.71■□□□□ 0.42
TSSC4-201ENST00000333256 LCN10Q6JVE6 187 aa17.71■□□□□ 0.42
TSSC4-201ENST00000333256 FAM199XQ6PEV8 388 aaPredicted RBP17.71■□□□□ 0.42
TSSC4-201ENST00000333256 LARP4Q71RC2 724 aaKnown RBP eCLIP17.71■□□□□ 0.42
TSSC4-201ENST00000333256 MTERF4Q7Z6M4 381 aaKnown RBP17.71■□□□□ 0.42
TSSC4-201ENST00000333256 CPLX4Q7Z7G2 160 aa17.71■□□□□ 0.42
TSSC4-201ENST00000333256 NUDT13Q86X67 352 aa17.71■□□□□ 0.42
TSSC4-201ENST00000333256 ZFAND4Q86XD8 727 aa17.71■□□□□ 0.42
TSSC4-201ENST00000333256 MAELQ96JY0 434 aaKnown RBP17.71■□□□□ 0.42
TSSC4-201ENST00000333256 PPP3R2Q96LZ3 170 aa17.71■□□□□ 0.42
TSSC4-201ENST00000333256 ELAC2Q9BQ52 826 aaKnown RBP17.71■□□□□ 0.42
TSSC4-201ENST00000333256 NRSN2Q9GZP1 204 aa17.71■□□□□ 0.42
TSSC4-201ENST00000333256 ASCL3Q9NQ33 180 aa17.71■□□□□ 0.42
TSSC4-201ENST00000333256 ASPMQ8IZT6 3477 aa17.7■□□□□ 0.42
TSSC4-201ENST00000333256 MEN1O00255 615 aa17.7■□□□□ 0.42
TSSC4-201ENST00000333256 TMPRSS11DO60235 418 aa17.7■□□□□ 0.42
TSSC4-201ENST00000333256 PCDH7O60245 1069 aa17.7■□□□□ 0.42
TSSC4-201ENST00000333256 BRINP1O60477 761 aa17.7■□□□□ 0.42
TSSC4-201ENST00000333256 SHOX2O60902 331 aaPredicted RBP17.7■□□□□ 0.42
TSSC4-201ENST00000333256 HBQ1P09105 142 aa17.7■□□□□ 0.42
TSSC4-201ENST00000333256 RORAP35398 523 aa17.7■□□□□ 0.42
TSSC4-201ENST00000333256 ABHD18Q0P651 414 aa17.7■□□□□ 0.42
TSSC4-201ENST00000333256 SLAMF1Q13291 335 aa17.7■□□□□ 0.42
TSSC4-201ENST00000333256 RUNX2Q13950 521 aa17.7■□□□□ 0.42
TSSC4-201ENST00000333256 LSM12Q3MHD2 195 aaKnown RBP17.7■□□□□ 0.42
TSSC4-201ENST00000333256 CCNYL2Q5T2Q4 361 aa17.7■□□□□ 0.42
TSSC4-201ENST00000333256 TMEM198Q66K66 360 aa17.7■□□□□ 0.42
TSSC4-201ENST00000333256 TIPARPQ7Z3E1 657 aaKnown RBP17.7■□□□□ 0.42
TSSC4-201ENST00000333256 COL26A1Q96A83 441 aa17.7■□□□□ 0.42
TSSC4-201ENST00000333256 C11orf24Q96F05 449 aaPredicted RBP17.7■□□□□ 0.42
TSSC4-201ENST00000333256 TMEM120AQ9BXJ8 343 aa17.7■□□□□ 0.42
TSSC4-201ENST00000333256 DDX31Q9H8H2 851 aaKnown RBP17.7■□□□□ 0.42
TSSC4-201ENST00000333256 ZNF304Q9HCX3 659 aa17.7■□□□□ 0.42
TSSC4-201ENST00000333256 G3BP2Q9UN86 482 aaKnown RBP17.7■□□□□ 0.42
TSSC4-201ENST00000333256 A0A0A6YYD5 115 aa17.69■□□□□ 0.42
TSSC4-201ENST00000333256 GNG14A0A1W2PPG7 69 aa17.69■□□□□ 0.42
TSSC4-201ENST00000333256 NVLO15381 856 aaKnown RBP17.69■□□□□ 0.42
TSSC4-201ENST00000333256 B3GALT2O43825 422 aa17.69■□□□□ 0.42
TSSC4-201ENST00000333256 PRR35P0CG20 571 aa17.69■□□□□ 0.42
TSSC4-201ENST00000333256 TIA1P31483 386 aaKnown RBP eCLIP17.69■□□□□ 0.42
TSSC4-201ENST00000333256 ZNF385CQ66K41 422 aaPredicted RBP17.69■□□□□ 0.42
TSSC4-201ENST00000333256 NOXRED1Q6NXP6 359 aa17.69■□□□□ 0.42
TSSC4-201ENST00000333256 PAGE2Q7Z2X7 111 aa17.69■□□□□ 0.42
TSSC4-201ENST00000333256 CDC26Q8NHZ8 85 aa17.69■□□□□ 0.42
TSSC4-201ENST00000333256 MARK4Q96L34 752 aa17.69■□□□□ 0.42
TSSC4-201ENST00000333256 SERINC2Q96SA4 455 aa17.69■□□□□ 0.42
TSSC4-201ENST00000333256 MAPKAP1Q9BPZ7 522 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms