RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 MUM1Q2TAK8 710 aa17.28■□□□□ 0.36
VIM-201ENST00000224237 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.28■□□□□ 0.36
VIM-201ENST00000224237 FIGLAQ6QHK4 219 aa17.28■□□□□ 0.36
VIM-201ENST00000224237 ASPGQ86U10 573 aa17.28■□□□□ 0.36
VIM-201ENST00000224237 ZNF761Q86XN6 746 aaPredicted RBP17.28■□□□□ 0.36
VIM-201ENST00000224237 NATD1Q8N6N6 113 aa17.28■□□□□ 0.36
VIM-201ENST00000224237 THAP11Q96EK4 314 aa17.28■□□□□ 0.36
VIM-201ENST00000224237 TEFMQ96QE5 360 aaKnown RBP17.28■□□□□ 0.36
VIM-201ENST00000224237 EFHD1Q9BUP0 239 aa17.28■□□□□ 0.36
VIM-201ENST00000224237 SLC6A16Q9GZN6 736 aa17.28■□□□□ 0.36
VIM-201ENST00000224237 KLHL31Q9H511 634 aa17.28■□□□□ 0.36
VIM-201ENST00000224237 UCK1Q9HA47 277 aa17.28■□□□□ 0.36
VIM-201ENST00000224237 PRMT8Q9NR22 394 aaPredicted RBP17.28■□□□□ 0.36
VIM-201ENST00000224237 USP22Q9UPT9 525 aa17.28■□□□□ 0.36
VIM-201ENST00000224237 GOLGA4Q13439 2230 aaKnown RBP17.27■□□□□ 0.36
VIM-201ENST00000224237 FAM220BPB1ANY3 271 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 LMO7DNF2Z398 122 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 CLIC1O00299 241 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 GMNNO75496 209 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 SLC35G6P0C7Q6 338 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 TDGF1P13385 188 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 MAZP56270 477 aaKnown RBP17.27■□□□□ 0.36
VIM-201ENST00000224237 TGM3Q08188 693 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 ABHD18Q0P651 414 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 TOR1AIP1Q5JTV8 583 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 FCRL6Q6DN72 434 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 GLYATQ6IB77 296 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 ABHD17CQ6PCB6 329 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 VN1R4Q7Z5H5 301 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 TICAM1Q8IUC6 712 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 ARL14Q8N4G2 192 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 FAM120BQ96EK7 910 aaKnown RBP17.27■□□□□ 0.36
VIM-201ENST00000224237 ZNF764Q96H86 408 aaPredicted RBP17.27■□□□□ 0.36
VIM-201ENST00000224237 TBCDQ9BTW9 1192 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 SYNPO2LQ9H987 977 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 VPS4AQ9UN37 437 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 PCDHGB4Q9UN71 923 aa17.27■□□□□ 0.36
VIM-201ENST00000224237 TP53BP1Q12888 1972 aaPredicted RBP17.27■□□□□ 0.36
VIM-201ENST00000224237 DHRS12A0PJE2 317 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 ELOVL7A1L3X0 281 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 TMPRSS11DO60235 418 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 GPR37L1O60883 481 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 STATHP02808 62 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 RPSAP08865 295 aaKnown RBP17.27■□□□□ 0.35
VIM-201ENST00000224237 NCK1P16333 377 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 GGT1P19440 569 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 HIST1H1TP22492 207 aaPredicted RBP17.27■□□□□ 0.35
VIM-201ENST00000224237 PPIBP23284 216 aaKnown RBP17.27■□□□□ 0.35
VIM-201ENST00000224237 PSMA4P25789 261 aaKnown RBP17.27■□□□□ 0.35
VIM-201ENST00000224237 MAP7Q14244 749 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 TEAD4Q15561 434 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 CMPK2Q5EBM0 449 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 ARMC6Q6NXE6 501 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 FBXO42Q6P3S6 717 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 KLHL35Q6PF15 583 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 ZNF793Q6ZN11 406 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 WDR5BQ86VZ2 330 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 CALHM3Q86XJ0 350 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 TMEM126BQ8IUX1 230 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 DTWD1Q8N5C7 304 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 OR4A15Q8NGL6 344 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 GOT1L1Q8NHS2 421 aaPredicted RBP17.27■□□□□ 0.35
VIM-201ENST00000224237 NT5CQ8TCD5 201 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 NSMCE2Q96MF7 247 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 FCRL4Q96PJ5 515 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 OR2A5Q96R48 311 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 MACROD1Q9BQ69 325 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.27■□□□□ 0.35
VIM-201ENST00000224237 ERVK-11Q9UQG0 969 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 GMEB1Q9Y692 573 aa17.27■□□□□ 0.35
VIM-201ENST00000224237 A0A0G2JN53 185 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 CASQ2O14958 399 aaPredicted RBP17.26■□□□□ 0.35
VIM-201ENST00000224237 PPM1DO15297 605 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 NOBOXO60393 691 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 SDC3O75056 442 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 PIAS2O75928 621 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 GPIP06744 558 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 ANXA6P08133 673 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 EFNA1P20827 205 aaPredicted RBP17.26■□□□□ 0.35
VIM-201ENST00000224237 SOX11P35716 441 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 BIRC2Q13490 618 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 SIM2Q14190 667 aaPredicted RBP17.26■□□□□ 0.35
VIM-201ENST00000224237 SLC9A5Q14940 896 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 MPEG1Q2M385 716 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 MTX3Q5HYI7 312 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 SERPINA11Q86U17 422 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 MAML2Q8IZL2 1156 aaPredicted RBP17.26■□□□□ 0.35
VIM-201ENST00000224237 ZCCHC7Q8N3Z6 543 aaKnown RBP17.26■□□□□ 0.35
VIM-201ENST00000224237 FAM47BQ8NA70 645 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 BAHD1Q8TBE0 780 aaPredicted RBP17.26■□□□□ 0.35
VIM-201ENST00000224237 CANT1Q8WVQ1 401 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 RSC1A1Q92681 617 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 GAL3ST3Q96A11 431 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 CIDECQ96AQ7 238 aaPredicted RBP17.26■□□□□ 0.35
VIM-201ENST00000224237 REXO5Q96IC2 774 aaKnown RBP17.26■□□□□ 0.35
VIM-201ENST00000224237 ZFYVE21Q9BQ24 234 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 VCX3BQ9H321 246 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 RPF2Q9H7B2 306 aaKnown RBP17.26■□□□□ 0.35
VIM-201ENST00000224237 COPS7BQ9H9Q2 264 aaPredicted RBP17.26■□□□□ 0.35
VIM-201ENST00000224237 PRDM7Q9NQW5 492 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms