RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, human

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDRT1-208	ENST00000630868	FBXL5	Q9UKA1	691 aa		4.41	□□□□□ -1.7
CDRT1-208	ENST00000630868	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.41	□□□□□ -1.7
CDRT1-208	ENST00000630868	EXOC7	Q9UPT5	735 aa		4.41	□□□□□ -1.7
CDRT1-208	ENST00000630868	PADI2	Q9Y2J8	665 aa		4.41	□□□□□ -1.7
CDRT1-208	ENST00000630868	EML5	Q05BV3	1969 aa		4.41	□□□□□ -1.7
CDRT1-208	ENST00000630868	NUP205	Q92621	2012 aa		4.41	□□□□□ -1.7
CDRT1-208	ENST00000630868	TRBV5-3	A0A0A0MS03	114 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	SDR42E2	A6NKP2	422 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	SRRM3	A6NNA2	597 aa	Predicted RBP	4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	KCNU1	A8MYU2	1149 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	KPNA7	A9QM74	516 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	FAM90A26	D6RGX4	464 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	SPECC1L-ADORA2A	F8WAN1	911 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868		H0YIG0	161 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868		J3KR12	359 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	SLC16A5	O15375	505 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	TRAPPC3	O43617	180 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	B3GAT3	O94766	335 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	SLITRK3	O94933	977 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	SEC24A	O95486	1093 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	TGFA	P01135	160 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	OR2T7	P0C7T2	308 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	GCFC2	P16383	781 aa	Known RBP	4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	CSRP1	P21291	193 aa	Known RBP	4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	ACAA2	P42765	397 aa	Known RBP	4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	AVPR1B	P47901	424 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	RARRES1	P49788	294 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	ASCL1	P50553	236 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	HSF1	Q00613	529 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	AKAP17A	Q02040	695 aa	Known RBP	4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	GCNT1	Q02742	428 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	STIM1	Q13586	685 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	NR1D2	Q14995	579 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	EFNB3	Q15768	340 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	UPP1	Q16831	310 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	SMTNL2	Q2TAL5	461 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	XKR9	Q5GH70	373 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	XKR4	Q5GH76	650 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	CYP4A22	Q5TCH4	519 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	FNDC7	Q5VTL7	733 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	ZDHHC20	Q5W0Z9	365 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	PRR27	Q6MZM9	219 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	DUS1L	Q6P1R4	473 aa	Known RBP	4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	CYB5D1	Q6P9G0	228 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	ENPP7	Q6UWV6	458 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	TMPRSS11F	Q6ZWK6	438 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	TRAPPC11	Q7Z392	1133 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	ZER1	Q7Z7L7	766 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	ADCK1	Q86TW2	530 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	CDR2L	Q86X02	465 aa	Predicted RBP	4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	ELMOD2	Q8IZ81	293 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	BLID	Q8IZY5	108 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	PCDH20	Q8N6Y1	951 aa	Known RBP	4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	ACVR1C	Q8NER5	493 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	KIAA1524	Q8TCG1	905 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	ZNF606	Q8WXB4	792 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	MOB3A	Q96BX8	217 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	AP2M1	Q96CW1	435 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	UROC1	Q96N76	676 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	C8orf49	Q96NF6	230 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	FNDC11	Q9BVV2	318 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	MAP6D1	Q9H9H5	199 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	CLK4	Q9HAZ1	481 aa	Known RBP	4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	CPNE5	Q9HCH3	593 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	THSD1	Q9NS62	852 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	COMMD8	Q9NX08	183 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	OR6C3	Q9NZP0	311 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	TBC1D7	Q9P0N9	293 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	TINAG	Q9UJW2	476 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	AGO2	Q9UKV8	859 aa	Known RBP	4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	HBS1L	Q9Y450	684 aa	Known RBP	4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	TESMIN	Q9Y4I5	508 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	RNF114	Q9Y508	228 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	INSL5	Q9Y5Q6	135 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	PDCD11	Q14690	1871 aa	Known RBP	4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	KIF26A	Q9ULI4	1882 aa	Predicted RBP	4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	GOLGA4	Q13439	2230 aa	Known RBP	4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	CABIN1	Q9Y6J0	2220 aa		4.4	□□□□□ -1.71
CDRT1-208	ENST00000630868	BCLAF3	A2AJT9	711 aa	Known RBP	4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	DUXA	A6NLW8	204 aa		4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	PRRG1	O14668	218 aa		4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	EXTL3	O43909	919 aa		4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	GLCE	O94923	617 aa		4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	PLG	P00747	810 aa	Predicted RBP	4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	EDN1	P05305	212 aa		4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	CSN3	P07498	182 aa		4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	SPP1	P10451	314 aa		4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	CEACAM1	P13688	526 aa		4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	ETS1	P14921	441 aa		4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	PSMA5	P28066	241 aa		4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	HNRNPH1	P31943	449 aa	Known RBP	4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	LHX1	P48742	406 aa		4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	SERPINH1	P50454	418 aa	Known RBP	4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	NOVA1	P51513	510 aa	Known RBP	4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	ARFIP1	P53367	373 aa		4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	GMFB	P60983	142 aa		4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	KCNJ10	P78508	379 aa		4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	NUCB2	P80303	420 aa		4.39	□□□□□ -1.71
CDRT1-208	ENST00000630868	EGR4	Q05215	589 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms