RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CABIN1Q9Y6J0 2220 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 ADAMTS9Q9P2N4 1935 aa3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 MUC22E2RYF6 1773 aaPredicted RBP3.48□□□□□ -1.85
CKS1BP3-201ENST00000600888 NUMA1Q14980 2115 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 TPRP12270 2363 aaKnown RBP3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 DOCK9Q9BZ29 2069 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 GTPBP10A4D1E9 387 aaKnown RBP3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 LILRA5A6NI73 299 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 LIPT2A6NK58 231 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 F5H0A9 414 aaPredicted RBP3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 M0QZ24 198 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 O00370 1275 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 CACNG3O60359 315 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 KRT36O76013 467 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 APODP05090 189 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 CCDC192P0DO97 292 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 RALAP11233 206 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 RARGP13631 454 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 HLA-DOBP13765 273 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 ADORA2BP29275 332 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 TNFRSF4P43489 277 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 PGFP49763 221 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 FUT6P51993 359 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 DLX5P56178 289 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 SLC8A3P57103 927 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 COG7P83436 770 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 RELQ04864 619 aaPredicted RBP3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 BST2Q10589 180 aaKnown RBP3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 E2F5Q15329 346 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 SOWAHCQ53LP3 525 aaPredicted RBP3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 FAM76BQ5HYJ3 339 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 DCST1Q5T197 706 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 TRNP1Q6NT89 227 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 FAM180BQ6P0A1 224 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 LCLAT1Q6UWP7 414 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 ZNF771Q7L3S4 317 aaPredicted RBP3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 ENOSF1Q7L5Y1 443 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 PIGZQ86VD9 579 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 NRROSQ86YC3 692 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 BBS7Q8IWZ6 715 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 MLKLQ8NB16 471 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 RPLP0P6Q8NHW5 317 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 OLIG1Q8TAK6 271 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 HMGCLL1Q8TB92 370 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 NELFBQ8WX92 580 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 IRGQQ8WZA9 623 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 SECISBP2LQ93073 1101 aaKnown RBP3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 TAAR8Q969N4 342 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 AZIN2Q96A70 460 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 EEF2KMTQ96G04 330 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 CNOT6LQ96LI5 555 aaKnown RBP3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 HSFY1Q96LI6 401 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 CSTL1Q9H114 145 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 MUC13Q9H3R2 512 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 NMUR1Q9HB89 426 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 C2orf42Q9NWW7 574 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 OSER1Q9NX31 292 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 WDR35Q9P2L0 1181 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 OR14J1Q9UGF5 321 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 RWDD2AQ9UIY3 292 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 STOML2Q9UJZ1 356 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 LSM7Q9UK45 103 aaKnown RBP3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 GMEB2Q9UKD1 530 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 POU2F3Q9UKI9 436 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 TSPAN16Q9UKR8 245 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 RAB23Q9ULC3 237 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 MMP17Q9ULZ9 603 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 AMDHD2Q9Y303 409 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 HBS1LQ9Y450 684 aaKnown RBP3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 PCDHGA5Q9Y5G8 931 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 DNAH14Q0VDD8 3507 aa3.47□□□□□ -1.85
CKS1BP3-201ENST00000600888 NCOR2Q9Y618 2525 aa3.46□□□□□ -1.85
CKS1BP3-201ENST00000600888 ACACBO00763 2458 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 TMEM131Q92545 1883 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 PCDH15Q96QU1 1955 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 PGPEP1LA6NFU8 196 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 HCRTR2O43614 444 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 NDUFS3O75489 264 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 APBB3O95704 486 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 PENKP01210 267 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 IGLV3-27P01718 113 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 CISD3P0C7P0 127 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZNF806P0C7X5 589 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 CDH1P12830 882 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 MYOD1P15172 320 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 CDH2P19022 906 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 CD53P19397 219 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 DGKAP23743 735 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 USP8P40818 1118 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 APOBEC1P41238 236 aaKnown RBP3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 TKTL1P51854 596 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 LIMK1P53667 647 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 DAOAP59103 153 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 TAS2R38P59533 333 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 YWHAGP61981 247 aaKnown RBP eCLIP3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZBED6P86452 979 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 MAD2L1Q13257 205 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 MAMLD1Q13495 774 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 ENPP2Q13822 863 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 SIM2Q14190 667 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms