RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 CLEC3AO75596 197 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 KLHL2O95198 593 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 FHP07954 510 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 ITGAMP11215 1152 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 TYK2P29597 1187 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 SERPINB8P50452 374 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 SKP1P63208 163 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 XKR6Q5GH73 641 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 LINC00696Q6ZRV3 163 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 RIPOR1Q6ZS17 1223 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 PLD6Q8N2A8 252 aaKnown RBP21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 TTLQ8NG68 377 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 ISL2Q96A47 359 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 MS4A6EQ96DS6 147 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 C19orf60Q96EN9 201 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 SEC16BQ96JE7 1060 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 PAFAH2Q99487 392 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 PTGFRNQ9P2B2 879 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 NFU1Q9UMS0 254 aa21.02■□□□□ 0.96
GTF2F1-204ENST00000594965 RELNP78509 3460 aa21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 WFS1O76024 890 aa21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 SEC24DO94855 1032 aaPredicted RBP21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 GSTM2P28161 218 aa21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 CASP2P42575 452 aa21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 CHIT1Q13231 466 aa21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 ACAP2Q15057 778 aa21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 TBCCQ15814 346 aa21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 FAM83EQ2M2I3 478 aa21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 ADPRMQ3LIE5 342 aa21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 CA13Q8N1Q1 262 aa21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 SIRT6Q8N6T7 355 aa21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 EFCAB3Q8N7B9 438 aa21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 LRRN4CLQ8ND94 238 aa21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 UHMK1Q8TAS1 419 aaKnown RBP21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 GAL3ST3Q96A11 431 aa21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 SNRNP40Q96DI7 357 aaKnown RBP21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 RHBGQ9H310 441 aa21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 CLK4Q9HAZ1 481 aaKnown RBP21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 C19orf25Q9UFG5 118 aaPredicted RBP21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 PCDHGA10Q9Y5H3 936 aa21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 CNTRLQ7Z7A1 2325 aa21.01■□□□□ 0.95
GTF2F1-204ENST00000594965 A0A0G2JN53 185 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 CCDC189A1A4V9 331 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 MAGEB17A8MXT2 336 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 K7EPI3 171 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 KLK8O60259 260 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 INHBAP08476 426 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 UQCRFS1P47985 274 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 STXBP1P61764 594 aaKnown RBP21■□□□□ 0.95
GTF2F1-204ENST00000594965 IRF8Q02556 426 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 SRSF1Q07955 248 aaKnown RBP eCLIP21■□□□□ 0.957e-7■■■□□ 14.9
GTF2F1-204ENST00000594965 PCDH1Q08174 1060 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 ABRAXAS2Q15018 415 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 B3GNTL1Q67FW5 361 aaPredicted RBP21■□□□□ 0.95
GTF2F1-204ENST00000594965 ATCAYQ86WG3 371 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 IQCKQ8N0W5 287 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 CISD2Q8N5K1 135 aaKnown RBP21■□□□□ 0.95
GTF2F1-204ENST00000594965 CATSPER1Q8NEC5 780 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 DNAJB14Q8TBM8 379 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 DCAKDQ8WVC6 231 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 CCT6BQ92526 530 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 QRFPRQ96P65 431 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 EFCAB11Q9BUY7 163 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 ILKAPQ9H0C8 392 aaPredicted RBP21■□□□□ 0.95
GTF2F1-204ENST00000594965 EPS8L2Q9H6S3 715 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 ZNF358Q9NW07 568 aa21■□□□□ 0.95
GTF2F1-204ENST00000594965 CLEC18AA5D8T8 446 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 ANKDD1BA6NHY2 528 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 FAM227AF5H4B4 570 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 ERI3O43414 337 aaKnown RBP20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 B4GALT2O60909 372 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 ICAM2P13598 275 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 BTN3A2P78410 334 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 BTG2P78543 158 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 LAPTM5Q13571 262 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 RUNX2Q13950 521 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 NSDHLQ15738 373 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 SFT2D3Q587I9 215 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 TECRLQ5HYJ1 363 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 PLAG1Q6DJT9 500 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 CLEC18BQ6UXF7 455 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 CLEC18CQ8NCF0 446 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 GALNT11Q8NCW6 608 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 VPS11Q9H270 941 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 OPTCQ9UBM4 332 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 NTNG1Q9Y2I2 539 aa20.99■□□□□ 0.95
GTF2F1-204ENST00000594965 A0A087WUV0 522 aaPredicted RBP20.98■□□□□ 0.95
GTF2F1-204ENST00000594965 SYCE1LA8MT33 242 aa20.98■□□□□ 0.95
GTF2F1-204ENST00000594965 POC1B-GALNT4F8VUJ3 575 aa20.98■□□□□ 0.95
GTF2F1-204ENST00000594965 RHOXF2BP0C7M4 288 aa20.98■□□□□ 0.95
GTF2F1-204ENST00000594965 RNH1P13489 461 aaKnown RBP20.98■□□□□ 0.95
GTF2F1-204ENST00000594965 JAK1P23458 1154 aa20.98■□□□□ 0.95
GTF2F1-204ENST00000594965 SERPINB9P50453 376 aa20.98■□□□□ 0.95
GTF2F1-204ENST00000594965 SETDB1Q15047 1291 aa20.98■□□□□ 0.95
GTF2F1-204ENST00000594965 QSOX2Q6ZRP7 698 aa20.98■□□□□ 0.95
GTF2F1-204ENST00000594965 IFT20Q8IY31 132 aa20.98■□□□□ 0.95
GTF2F1-204ENST00000594965 OR2L5Q8NG80 312 aa20.98■□□□□ 0.95
GTF2F1-204ENST00000594965 RHOXF2Q9BQY4 288 aa20.98■□□□□ 0.95
GTF2F1-204ENST00000594965 ASF1BQ9NVP2 202 aa20.98■□□□□ 0.95
GTF2F1-204ENST00000594965 PLA2G3Q9NZ20 509 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms