RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 MPZP25189 248 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 MAGEA9P43362 315 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 SLC1A6P48664 564 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 BTG1P62324 171 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 CREB5Q02930 508 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 CUL3Q13618 768 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 MPPED2Q15777 294 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 IL17AQ16552 155 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 TSTQ16762 297 aaKnown RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 IGSF11Q5DX21 431 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 TEX35Q5T0J7 233 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 ZNF658Q5TYW1 1059 aaPredicted RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 SNX30Q5VWJ9 437 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 FAAH2Q6GMR7 532 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 KRTAP5-10Q6L8G5 202 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 PRR27Q6MZM9 219 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 ZSCAN25Q6NSZ9 544 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 C2orf66Q6UXQ4 117 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 IL17RELQ6ZVW7 336 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 Q71RC1 249 aaPredicted RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 NUFIP2Q7Z417 695 aaKnown RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 TBC1D10CQ8IV04 446 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 ERI1Q8IV48 349 aaKnown RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 CCDC60Q8IWA6 550 aaPredicted RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 DND1Q8IYX4 353 aaKnown RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 RYBPQ8N488 228 aaPredicted RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 ZNF433Q8N7K0 673 aaPredicted RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 ZNF491Q8N8L2 437 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 RASGEF1AQ8N9B8 481 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 MCUQ8NE86 351 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 ATL1Q8WXF7 558 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 NSUN4Q96CB9 384 aaKnown RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 SPACA9Q96E40 222 aaPredicted RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 SPDL1Q96EA4 605 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 RBM18Q96H35 190 aaKnown RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 LURAP1Q96LR2 239 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 CASD1Q96PB1 797 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 CDX2Q99626 313 aaPredicted RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 MUC13Q9H3R2 512 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 CUEDC2Q9H467 287 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 SMARCAD1Q9H4L7 1026 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 ACTL8Q9H568 366 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 RNF121Q9H920 327 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 PPCSQ9HAB8 311 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 C3orf14Q9HBI5 128 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 PSD3Q9NYI0 1048 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 TXNDC16Q9P2K2 825 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 SEC63Q9UGP8 760 aaKnown RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 KLHL21Q9UJP4 597 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 FBXO7Q9Y3I1 522 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 ZNFX1Q9P2E3 1918 aaKnown RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 TRAV24A0A0B4J272 114 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 A0A0G2JLM5 398 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 A0A1W2PPK0 400 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 LOC390937A0A1W2PQ73 354 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 LOC105371045A0A1W2PR82 267 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 A8MU76 341 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 ANKRD63C9JTQ0 380 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 TOMM70O94826 608 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 RTN3O95197 1032 aaPredicted RBP0.37□□□□□ -2.35
COPB1-212ENST00000534771 LDHAP00338 332 aaKnown RBP0.37□□□□□ -2.35
COPB1-212ENST00000534771 HSPB1P04792 205 aaKnown RBP0.37□□□□□ -2.35
COPB1-212ENST00000534771 PFKFB1P16118 471 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 CHMP24386 653 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 DNASE1P24855 282 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 HMGCLP35914 325 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 ARL3P36405 182 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 TRPC1P48995 793 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 PPM1FP49593 454 aaPredicted RBP0.37□□□□□ -2.35
COPB1-212ENST00000534771 SLC12A3P55017 1021 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 CDH13P55290 713 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 PEX3P56589 373 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 RIPPLY3P57055 190 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 RBBP4Q09028 425 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 HSPB3Q12988 150 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 AIMP2Q13155 320 aaKnown RBP0.37□□□□□ -2.35
COPB1-212ENST00000534771 BIRC3Q13489 604 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 MAMLD1Q13495 774 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 NONOQ15233 471 aaKnown RBP eCLIP0.37□□□□□ -2.35
COPB1-212ENST00000534771 TGIF1Q15583 401 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 SGCBQ16585 318 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 C17orf58Q2M2W7 97 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 CNPY1Q3B7I2 92 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 ARMCX4Q5H9R4 360 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 KRT79Q5XKE5 535 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 SCARA5Q6ZMJ2 495 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 MACC1Q6ZN28 852 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 Q6ZVQ6 151 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 PXKQ7Z7A4 578 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 TGIF2LYQ8IUE0 185 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 CCDC71Q8IV32 467 aaPredicted RBP0.37□□□□□ -2.35
COPB1-212ENST00000534771 ZNF595Q8IYB9 648 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 TMEM61Q8N0U2 210 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 GPR137CQ8N3F9 429 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 WDTC1Q8N5D0 677 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 ZNF781Q8N8C0 355 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 XXYLT1Q8NBI6 393 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 ZNRF1Q8ND25 227 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 ZNF397Q8NF99 534 aaPredicted RBP0.37□□□□□ -2.35
COPB1-212ENST00000534771 VN1R17PQ8TDU5 208 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms