RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 ENPP7Q6UWV6 458 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZNF782Q6ZMW2 699 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 Q71RC1 249 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZNF534Q76KX8 674 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 ERC1Q8IUD2 1116 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 GPR65Q8IYL9 337 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 SYCP3Q8IZU3 236 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 ALLCQ8N6M5 410 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 ARFGAP1Q8N6T3 406 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 NHLRC2Q8NBF2 726 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 LEMD2Q8NC56 503 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 OR7G3Q8NG95 312 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 NDRG1Q92597 394 aaKnown RBP4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 EEF2KMTQ96G04 330 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 CABS1Q96KC9 395 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 INPP4AQ96PE3 977 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 SLC22A12Q96S37 553 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 POLR3CQ9BUI4 534 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 FAM129AQ9BZQ8 928 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 PRSS22Q9GZN4 317 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 CPVLQ9H3G5 476 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 TMEM206Q9H813 350 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 PCDH9Q9HC56 1237 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 TUFT1Q9NNX1 390 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 TMEM184CQ9NVA4 438 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 TBC1D7Q9P0N9 293 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 SATB2Q9UPW6 733 aa4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 TP53BP1Q12888 1972 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZBED9Q6R2W3 1325 aa4.46□□□□□ -1.69
HMGB1P23-201ENST00000518743 CNTNAP2Q9UHC6 1331 aa4.46□□□□□ -1.69
HMGB1P23-201ENST00000518743 ARID2Q68CP9 1835 aa4.46□□□□□ -1.69
HMGB1P23-201ENST00000518743 KIF26BQ2KJY2 2108 aa4.46□□□□□ -1.69
HMGB1P23-201ENST00000518743 MYH9P35579 1960 aaKnown RBP4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 SDR42E2A6NKP2 422 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 ANKRD66B4E2M5 251 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 J3QR06 171 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 SGK1O00141 431 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 KERAO60938 352 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 CSO75390 466 aaKnown RBP4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 STAM2O75886 525 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 SYF2O95926 243 aaKnown RBP4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 FAM58BPP0C7Q3 252 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 GOLGA8HP0CJ92 632 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 SAGP10523 405 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 DARSP14868 501 aaKnown RBP4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 IL10P22301 178 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 ACAT1P24752 427 aaKnown RBP4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 TMOD1P28289 359 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 RBMXP38159 391 aaKnown RBP4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 PRKCIP41743 596 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 KHKP50053 298 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 DUSP3P51452 185 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 NUDT6P53370 316 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 P2RX3P56373 397 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 MZT1Q08AG7 82 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 KLRB1Q12918 225 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 SRSF6Q13247 344 aaKnown RBP4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 KIF19Q2TAC6 998 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 KBTBD12Q3ZCT8 623 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 AMZ1Q400G9 498 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 SBK1Q52WX2 424 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 CEP78Q5JTW2 689 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 EOGTQ5NDL2 527 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 WASHC2DQ5SRD0 308 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 RNASEH2BQ5TBB1 312 aaKnown RBP4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 C18orf63Q68DL7 685 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 IGFL4Q6B9Z1 124 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 PRR27Q6MZM9 219 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 CASC4Q6P4E1 433 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 NOTUMQ6P988 496 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 FIGLAQ6QHK4 219 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 ZNF66Q6ZN08 573 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 GBP6Q6ZN66 633 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 STOX1Q6ZVD7 989 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 PRIMA1Q86XR5 153 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 LDLRAD3Q86YD5 345 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 ZNF595Q8IYB9 648 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 NAGSQ8N159 534 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 RYBPQ8N488 228 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 EID2Q8N6I1 236 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 SLC4A11Q8NBS3 891 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 LNX1Q8TBB1 728 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 SPDL1Q96EA4 605 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 GRAMD2BQ96HH9 432 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 INTS14Q96SY0 518 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 POLDIP3Q9BY77 421 aaKnown RBP4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 LRRCC1Q9C099 1032 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 VAT1LQ9HCJ6 419 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 HPS4Q9NQG7 708 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 COMMD8Q9NX08 183 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 CHCHD3Q9NX63 227 aaKnown RBP4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 ZNHIT2Q9UHR6 403 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 INSL5Q9Y5Q6 135 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 HS3ST3B1Q9Y662 390 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 NFS1Q9Y697 457 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 NFASCO94856 1347 aa4.46□□□□□ -1.7
HMGB1P23-201ENST00000518743 DCHS2Q6V1P9 2916 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 MXRA5Q9NR99 2828 aa4.45□□□□□ -1.7
HMGB1P23-201ENST00000518743 COL1A2P08123 1366 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms