RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 GORABQ5T7V8 394 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 JAKMIP3Q5VZ66 844 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 LIPJQ5W064 366 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 Q6ZVQ6 151 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 BEST4Q8NFU0 473 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 NSUN4Q96CB9 384 aaKnown RBP1.52□□□□□ -2.17
CCDC93-209ENST00000488908 FAF2Q96CS3 445 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 IMMP1LQ96LU5 166 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 ZNF184Q99676 751 aaPredicted RBP1.52□□□□□ -2.17
CCDC93-209ENST00000488908 MXD3Q9BW11 206 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 ISG20L2Q9H9L3 353 aaKnown RBP1.52□□□□□ -2.17
CCDC93-209ENST00000488908 PATZ1Q9HBE1 687 aaKnown RBP1.52□□□□□ -2.17
CCDC93-209ENST00000488908 OLA1Q9NTK5 396 aaKnown RBP1.52□□□□□ -2.17
CCDC93-209ENST00000488908 PRMT7Q9NVM4 692 aaPredicted RBP1.52□□□□□ -2.17
CCDC93-209ENST00000488908 AASSQ9UDR5 926 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 COLEC10Q9Y6Z7 277 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 A0A087X0M5 115 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 A0A1B0GX30 115 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 FRG2CA6NGY1 282 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 B4E171 279 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 FBP2O00757 339 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 ATP6AP2O75787 350 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 DNTTP04053 509 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 LINGO3P0C6S8 592 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 VDRP11473 427 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 TSPAN7P41732 249 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 ASCL1P50553 236 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 BTG1P62324 171 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 FASTKQ14296 549 aaKnown RBP1.51□□□□□ -2.17
CCDC93-209ENST00000488908 ABRAXAS2Q15018 415 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 AGBL2Q5U5Z8 902 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 AGAP6Q5VW22 663 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 MACC1Q6ZN28 852 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 GANCQ8TET4 914 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 RCHY1Q96PM5 261 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 TBX15Q96SF7 602 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 EXOC1Q9NV70 894 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 SLC24A2Q9UI40 661 aa1.51□□□□□ -2.17
CCDC93-209ENST00000488908 PTRH2Q9Y3E5 179 aaKnown RBP1.51□□□□□ -2.17
CCDC93-209ENST00000488908 IGLV3-16A0A075B6K0 115 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 LOC390937A0A1W2PQ73 354 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 FSD2A1L4K1 749 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 J3KRW8 73 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 CSN3P07498 182 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 SKILP12757 684 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 CD59P13987 128 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 CD22P20273 847 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 HNRNPA2B1P22626 353 aaKnown RBP1.5□□□□□ -2.17
CCDC93-209ENST00000488908 NRIP1P48552 1158 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 ARF3P61204 181 aaPredicted RBP1.5□□□□□ -2.17
CCDC93-209ENST00000488908 ARF1P84077 181 aaKnown RBP1.5□□□□□ -2.17
CCDC93-209ENST00000488908 MPP1Q00013 466 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 ILF2Q12905 390 aaKnown RBP1.5□□□□□ -2.17
CCDC93-209ENST00000488908 RALGDSQ12967 914 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 PSG7Q13046 419 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 PLEKHS1Q5SXH7 462 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 CCDC70Q6NSX1 233 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 NUFIP2Q7Z417 695 aaKnown RBP1.5□□□□□ -2.17
CCDC93-209ENST00000488908 CFAP61Q8NHU2 1237 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 ZNF622Q969S3 477 aaKnown RBP eCLIP1.5□□□□□ -2.17
CCDC93-209ENST00000488908 EXOC4Q96A65 974 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 PGM2Q96G03 612 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 NDNQ99608 321 aa1.5□□□□□ -2.17
CCDC93-209ENST00000488908 NIP7Q9Y221 180 aaKnown RBP eCLIP1.5□□□□□ -2.17
CCDC93-209ENST00000488908 TNRQ92752 1358 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 PI4KAP2A4QPH2 592 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 CCT8L1PA6NM43 557 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 C17orf105B2RV13 164 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 CA11O75493 328 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 MBD4O95243 580 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 GSRP00390 522 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 SERPING1P05155 500 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 SLC1A6P48664 564 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 STAT2P52630 851 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 PEX3P56589 373 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 CLDN17P56750 224 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 CXCL6P80162 114 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 OVGP1Q12889 678 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 ZNF776Q68DI1 518 aaPredicted RBP1.49□□□□□ -2.17
CCDC93-209ENST00000488908 FAAH2Q6GMR7 532 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 Q71RC1 249 aaPredicted RBP1.49□□□□□ -2.17
CCDC93-209ENST00000488908 EXOC8Q8IYI6 725 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 SLC22A18ASQ8N1D0 253 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 LYPD1Q8N2G4 141 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 TEX26Q8N6G2 289 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 PCNPQ8WW12 178 aaKnown RBP1.49□□□□□ -2.17
CCDC93-209ENST00000488908 HDAC2Q92769 488 aaKnown RBP1.49□□□□□ -2.17
CCDC93-209ENST00000488908 RBM18Q96H35 190 aaKnown RBP1.49□□□□□ -2.17
CCDC93-209ENST00000488908 CCT8L2Q96SF2 557 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 CHRDL1Q9BU40 450 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 PINK1Q9BXM7 581 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 KRTAP4-1Q9BYQ7 146 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 LIME1Q9H400 295 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 RIMS4Q9H426 269 aaPredicted RBP1.49□□□□□ -2.17
CCDC93-209ENST00000488908 FZD8Q9H461 694 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 FNDC4Q9H6D8 234 aaPredicted RBP1.49□□□□□ -2.17
CCDC93-209ENST00000488908 MYH16Q9H6N6 1097 aa1.49□□□□□ -2.17
CCDC93-209ENST00000488908 DDX25Q9UHL0 483 aaKnown RBP1.49□□□□□ -2.17
CCDC93-209ENST00000488908 FAM231BA6NCW3 169 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 PGPEP1LA6NFU8 196 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms