RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 STIP1P31948 543 aaKnown RBP15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 CUL1Q13616 776 aa15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 HERC3Q15034 1050 aa15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 MEI1Q5TIA1 1274 aa15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 C16orf47Q6ZP98 133 aaPredicted RBP15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 CENPUQ71F23 418 aa15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 OTUD6BQ8N6M0 293 aa15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 PRELID2Q8N945 189 aa15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 TC2NQ8N9U0 490 aa15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 MFSD9Q8NBP5 474 aa15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 PSD4Q8NDX1 1056 aa15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 OR2M7Q8NG81 312 aa15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 NANOS1Q8WY41 292 aaKnown RBP15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 SMC6Q96SB8 1091 aa15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 CCDC177Q9NQR7 707 aaPredicted RBP15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 KCMF1Q9P0J7 381 aa15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 PACSIN2Q9UNF0 486 aaPredicted RBP15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 ATRQ13535 2644 aa15.99■□□□□ 0.15
UBE2D4-209ENST00000454428 A0A1B0GVC2 190 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 OR14I1A6ND48 311 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 BCKDKO14874 412 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 LIASO43766 372 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 IFNB1P01574 187 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 TUBB4AP04350 444 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 HEXAP06865 529 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 JAK1P23458 1154 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 DEFB134Q4QY38 66 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 RNF187Q5TA31 235 aaPredicted RBP15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 MRNIPQ6NTE8 343 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 PAOXQ6QHF9 649 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 TMEM156Q8N614 296 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 ACRBPQ8NEB7 543 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 GOT1L1Q8NHS2 421 aaPredicted RBP15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 CREB3L4Q8TEY5 395 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 PANX2Q96RD6 677 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 TCF12Q99081 682 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 KIFC1Q9BW19 673 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 TTTY12Q9BZ98 90 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 LACRTQ9GZZ8 138 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 TIMMDC1Q9NPL8 285 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 CUBNO60494 3623 aa15.98■□□□□ 0.15
UBE2D4-209ENST00000454428 FIGNL2A6NMB9 653 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 SYT5O00445 386 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 RAF1P04049 648 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 PTMAP06454 111 aaKnown RBP15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 CELA3AP09093 270 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 SLC35G6P0C7Q6 338 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 ZSCAN5DPP0CG00 497 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 MPC1LP0DKB6 136 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 CDH1P12830 882 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 ALOX12P18054 663 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 ADSLP30566 484 aaPredicted RBP15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 GPR143P51810 404 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 HYAL2Q12891 473 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 FLYWCH1Q4VC44 716 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 XKR6Q5GH73 641 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 TRILQ7L0X0 811 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 WDR53Q7Z5U6 358 aaPredicted RBP15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 SDCCAG8Q86SQ7 713 aaPredicted RBP15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 RELL2Q8NC24 303 aaPredicted RBP15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 B3GNT7Q8NFL0 401 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 SH3GL2Q99962 352 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 CNPPD1Q9BV87 410 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 FAM129AQ9BZQ8 928 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 IL22Q9GZX6 179 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 EDARQ9UNE0 448 aa15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 PPIEQ9UNP9 301 aaKnown RBP15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 REXO2Q9Y3B8 237 aaKnown RBP15.97■□□□□ 0.15
UBE2D4-209ENST00000454428 CTAGE15A4D2H0 777 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 E5RI56 91 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 G3V3Y1 287 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 NDUFS4O43181 175 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 ZBTB14O43829 449 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 OGNP20774 298 aaKnown RBP15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 SSR4P51571 173 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 CLCN2P51788 898 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 MEF2AQ02078 507 aaPredicted RBP15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 DAZAP2Q15038 168 aaPredicted RBP15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 SPA17Q15506 151 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 ZNF549Q6P9A3 640 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 MBOAT1Q6ZNC8 495 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 SEM1Q6ZVN7 128 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 CHSY3Q70JA7 882 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 PIWIL4Q7Z3Z4 852 aaKnown RBP15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 CTAGE6Q86UF2 777 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 CILP2Q8IUL8 1156 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 CCDC170Q8IYT3 715 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 TMEM251Q8N6I4 163 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 SARGQ9BW04 601 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 REPIN1Q9BWE0 567 aaKnown RBP15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 PLEKHF2Q9H8W4 249 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 LIN28AQ9H9Z2 209 aaKnown RBP15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 PRDM9Q9NQV7 894 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 SYBUQ9NX95 663 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 ZFATQ9P243 1243 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 FBXW2Q9UKT8 454 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 CLDN16Q9Y5I7 305 aa15.96■□□□□ 0.15
UBE2D4-209ENST00000454428 BTNL10A8MVZ5 291 aa15.95■□□□□ 0.14
UBE2D4-209ENST00000454428 TGFBR3LH3BV60 316 aa15.95■□□□□ 0.14
UBE2D4-209ENST00000454428 AQP7O14520 342 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms