RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 ZNF696Q9H7X3 374 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 CTPS2Q9NRF8 586 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 TREX1Q9NSU2 369 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 MAN2C1Q9NTJ4 1040 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 BARHL2Q9NY43 387 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 SPHK1Q9NYA1 384 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 CNIH4Q9P003 139 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 USP36Q9P275 1121 aaKnown RBP4.8□□□□□ -1.64
EPHA3-202ENST00000452448 DNMT3BQ9UBC3 853 aaKnown RBP4.8□□□□□ -1.64
EPHA3-202ENST00000452448 B4GALT6Q9UBX8 382 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 CNOT8Q9UFF9 292 aaKnown RBP4.8□□□□□ -1.64
EPHA3-202ENST00000452448 PCDHA4Q9UN74 947 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 MGAT4BQ9UQ53 548 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 DRG1Q9Y295 367 aaKnown RBP4.8□□□□□ -1.64
EPHA3-202ENST00000452448 GRIP1Q9Y3R0 1128 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 PTGDR2Q9Y5Y4 395 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 MRPS18BQ9Y676 258 aaKnown RBP4.8□□□□□ -1.64
EPHA3-202ENST00000452448 PALLDQ8WX93 1383 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 CAMTA1Q9Y6Y1 1673 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 TEX13DA0A0J9YY54 714 aaPredicted RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 A0A1W2PPC4 97 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 A0A1W2PQ09 198 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 PLSCR5A0PG75 271 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 DRGXA6NNA5 263 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 WASH4PA8MWX3 477 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 CAPN5O15484 640 aaPredicted RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 HBP1O60381 514 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 OR10H2O60403 315 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 ADAP1O75689 374 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 H6PDO95479 791 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 ANGPTL1O95841 491 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 F11P03951 625 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 RAF1P04049 648 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 CSF1RP07333 972 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 JUNBP17275 347 aaPredicted RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 BMP6P22004 513 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 MGAT1P26572 445 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 DCKP27707 260 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 FMO3P31513 532 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 GNPDA1P46926 289 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 FMO5P49326 533 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 CCR6P51684 374 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 FGF8P55075 233 aaPredicted RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 ABCE1P61221 599 aaKnown RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 PPP2CBP62714 309 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 PPP2CAP67775 309 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 SEMG2Q02383 582 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 TNFRSF9Q07011 255 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 HYAL2Q12891 473 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 ORC2Q13416 577 aaPredicted RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 PAN2Q504Q3 1202 aaKnown RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 HSD17B12Q53GQ0 312 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 EFHC2Q5JST6 749 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 ARMC12Q5T9G4 340 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 MRNIPQ6NTE8 343 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 ACSM5Q6NUN0 579 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 TSSK4Q6SA08 328 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 MOXD1Q6UVY6 613 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 ADGRF4Q8IZF3 695 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 FITM2Q8N6M3 262 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 AOPEPQ8N6M6 819 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 OR7G3Q8NG95 312 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 OR4D6Q8NGJ1 314 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 GCDHQ92947 438 aaPredicted RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 SLITRK1Q96PX8 696 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 HBEGFQ99075 208 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 EBNA1BP2Q99848 306 aaKnown RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 PKP2Q99959 881 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 ZNF577Q9BSK1 485 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 TRMOQ9BU70 441 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 HIPK2Q9H2X6 1198 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 SOX17Q9H6I2 414 aaPredicted RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 CCNB1IP1Q9NPC3 277 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 SLC22A11Q9NSA0 550 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 PRMT7Q9NVM4 692 aaPredicted RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 TMEM216Q9P0N5 145 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 MKLN1Q9UL63 735 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 BAIAP2Q9UQB8 552 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 RHBDD3Q9Y3P4 386 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 SLIT3O75094 1523 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 MAST3O60307 1309 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 NEDD4P46934 1319 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 TAF1LQ8IZX4 1826 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 KDM6AO15550 1401 aaPredicted RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 TNS3Q68CZ2 1445 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 TGFBR3LH3BV60 316 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 ZNF701M0R085 212 aaPredicted RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 SURF4O15260 269 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 DLEU1O43261 78 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 SIGLEC6O43699 453 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 LCMT2O60294 686 aaKnown RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 CXCL14O95715 111 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 CYB5R3P00387 301 aaPredicted RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 YES1P07947 543 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 SNRPB2P08579 225 aaKnown RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 CD48P09326 243 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 ACSM4P0C7M7 580 aa4.79□□□□□ -1.64
EPHA3-202ENST00000452448 HSPD1P10809 573 aaKnown RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 ZNF25P17030 456 aaPredicted RBP4.79□□□□□ -1.64
EPHA3-202ENST00000452448 AGXTP21549 392 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms