RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 EMX1Q04741 257 aaPredicted RBP17.32■□□□□ 0.36
CD40-201ENST00000372276 PPP1R8Q12972 351 aaKnown RBP17.32■□□□□ 0.36
CD40-201ENST00000372276 GAB1Q13480 694 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 SCARB2Q14108 478 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 SIM2Q14190 667 aaPredicted RBP17.32■□□□□ 0.36
CD40-201ENST00000372276 TMEM240Q5SV17 173 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.32■□□□□ 0.36
CD40-201ENST00000372276 ARMCX6Q7L4S7 300 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 B3GNT8Q7Z7M8 397 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 GALNT5Q7Z7M9 940 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 AMZ2Q86W34 360 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 ARMC8Q8IUR7 673 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.32■□□□□ 0.36
CD40-201ENST00000372276 DEPDC4Q8N2C3 294 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 GEMIN6Q8WXD5 167 aaKnown RBP17.32■□□□□ 0.36
CD40-201ENST00000372276 SMG7Q92540 1137 aaKnown RBP17.32■□□□□ 0.36
CD40-201ENST00000372276 COX14Q96I36 57 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 SAMD11Q96NU1 681 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 FAM129BQ96TA1 746 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 AIF1LQ9BQI0 150 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 OR52A5Q9H2C5 316 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 TMEM245Q9H330 911 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 ASF1AQ9Y294 204 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 POFUT2Q9Y2G5 429 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 TNRC18O15417 2968 aaPredicted RBP17.32■□□□□ 0.36
CD40-201ENST00000372276 PRRT4C9JH25 899 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 CACNB4O00305 520 aaPredicted RBP17.32■□□□□ 0.36
CD40-201ENST00000372276 MMP20O60882 483 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 PFDN1O60925 122 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 GABARAPO95166 117 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 ERGP11308 486 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 CHI3L1P36222 383 aaPredicted RBP17.32■□□□□ 0.36
CD40-201ENST00000372276 HBA1P69905 142 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 RPP38P78345 283 aaKnown RBP17.32■□□□□ 0.36
CD40-201ENST00000372276 IL1RL1Q01638 556 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 KLHL35Q6PF15 583 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 FAM92BQ6ZTR7 304 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 C17orf64Q86WR6 236 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 ZNF540Q8NDQ6 660 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 OR10Q1Q8NGQ4 319 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 SPPL2AQ8TCT8 520 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 FAR1Q8WVX9 515 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 NLNQ9BYT8 704 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 NAA50Q9GZZ1 169 aaKnown RBP17.32■□□□□ 0.36
CD40-201ENST00000372276 ANKHQ9HCJ1 492 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 MIEF1Q9NQG6 463 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 C1GALT1Q9NS00 363 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 EXO1Q9UQ84 846 aaKnown RBP17.32■□□□□ 0.36
CD40-201ENST00000372276 ZNF451Q9Y4E5 1061 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 HCFC2Q9Y5Z7 792 aa17.32■□□□□ 0.36
CD40-201ENST00000372276 NUP214P35658 2090 aaPredicted RBP17.31■□□□□ 0.36
CD40-201ENST00000372276 LINC01553A4QN01 128 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 ARRDC5A6NEK1 342 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 ANKDD1BA6NHY2 528 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 FAM20BO75063 409 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 C6orf47O95873 294 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 TGFB1P01137 390 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 NTRK1P04629 796 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 GRK3P35626 688 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 MAGEA8P43361 318 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 MVDP53602 400 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 TAS2R50P59544 299 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 CDK6Q00534 326 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 TSTA3Q13630 321 aaPredicted RBP17.31■□□□□ 0.36
CD40-201ENST00000372276 ANKRD34AQ69YU3 496 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 ANGPTL8Q6UXH0 198 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 NUDT18Q6ZVK8 323 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 LRRTM4Q86VH4 590 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 C12orf40Q86WS4 652 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 FAM129CQ86XR2 697 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 P3H2Q8IVL5 708 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 ZNF547Q8IVP9 402 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 CNIH3Q8TBE1 160 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 S100ZQ8WXG8 99 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 OR5P2Q8WZ92 322 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 SMARCD2Q92925 531 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 MYDGFQ969H8 173 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 NXPE3Q969Y0 559 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 LRRC3BQ96PB8 259 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 ZNF556Q9HAH1 456 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 COQ6Q9Y2Z9 468 aa17.31■□□□□ 0.36
CD40-201ENST00000372276 FAM32AQ9Y421 112 aaKnown RBP17.31■□□□□ 0.36
CD40-201ENST00000372276 CBFA2T3O75081 653 aa17.3■□□□□ 0.36
CD40-201ENST00000372276 BCAS1O75363 584 aaPredicted RBP17.3■□□□□ 0.36
CD40-201ENST00000372276 ARAFP10398 606 aa17.3■□□□□ 0.36
CD40-201ENST00000372276 ZNF182P17025 639 aaPredicted RBP17.3■□□□□ 0.36
CD40-201ENST00000372276 ACVR2AP27037 513 aa17.3■□□□□ 0.36
CD40-201ENST00000372276 RRM2P31350 389 aa17.3■□□□□ 0.36
CD40-201ENST00000372276 GALK1P51570 392 aa17.3■□□□□ 0.36
CD40-201ENST00000372276 ZNF234Q14588 700 aa17.3■□□□□ 0.36
CD40-201ENST00000372276 HEPACAMQ14CZ8 416 aa17.3■□□□□ 0.36
CD40-201ENST00000372276 ZNF385BQ569K4 471 aa17.3■□□□□ 0.36
CD40-201ENST00000372276 Q6ZNX1 250 aa17.3■□□□□ 0.36
CD40-201ENST00000372276 SLC9B2Q86UD5 537 aa17.3■□□□□ 0.36
CD40-201ENST00000372276 ZNF366Q8N895 744 aa17.3■□□□□ 0.36
CD40-201ENST00000372276 SMPDL3AQ92484 453 aa17.3■□□□□ 0.36
CD40-201ENST00000372276 FOXJ1Q92949 421 aa17.3■□□□□ 0.36
CD40-201ENST00000372276 ZNF300Q96RE9 604 aaPredicted RBP17.3■□□□□ 0.36
CD40-201ENST00000372276 DGCR6LQ9BY27 220 aa17.3■□□□□ 0.36
CD40-201ENST00000372276 TRPV4Q9HBA0 871 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms