RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 TCRBV21S2A2A0A5A6 115 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 MTMR11A4FU01 709 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 ZSCAN5CA6NGD5 496 aaPredicted RBP0.76□□□□□ -2.29
CEP290-208ENST00000604024 FOXI3A8MTJ6 420 aaPredicted RBP0.76□□□□□ -2.29
CEP290-208ENST00000604024 ERVV-1B6SEH8 477 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 ECE2O60344 883 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 SAP30O75446 220 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 ATP1A3P13637 1013 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 JAK1P23458 1154 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 FASP25445 335 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 PRKAR2BP31323 418 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 SFTPDP35247 375 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 OR3A3P47888 321 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 LHX1P48742 406 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 PPM1FP49593 454 aaPredicted RBP0.76□□□□□ -2.29
CEP290-208ENST00000604024 TGIF1Q15583 401 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 ZNF658BQ4V348 819 aaPredicted RBP0.76□□□□□ -2.29
CEP290-208ENST00000604024 SNX30Q5VWJ9 437 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 NUP54Q7Z3B4 507 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 CPEB2Q7Z5Q1 589 aaKnown RBP0.76□□□□□ -2.29
CEP290-208ENST00000604024 PRUNE1Q86TP1 453 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 APOBEC3FQ8IUX4 373 aaKnown RBP0.76□□□□□ -2.29
CEP290-208ENST00000604024 MKXQ8IYA7 352 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 CARNMT1Q8N4J0 409 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 KIAA1524Q8TCG1 905 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 NSUN4Q96CB9 384 aaKnown RBP0.76□□□□□ -2.29
CEP290-208ENST00000604024 ITPAQ9BY32 194 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 SYNCQ9H7C4 482 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 ANKZF1Q9H8Y5 726 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 NMUR1Q9HB89 426 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 TMEM9Q9P0T7 183 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 KLK12Q9UKR0 248 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 SMARCA2P51531 1590 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 IFT140Q96RY7 1462 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 CEP164Q9UPV0 1460 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 SMARCA4P51532 1647 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 DCAF1Q9Y4B6 1507 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 LOC102723996A0A087X1L8 192 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 B4E171 279 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 ZNF253O75346 499 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 SIX3O95343 332 aaPredicted RBP0.76□□□□□ -2.29
CEP290-208ENST00000604024 MYL6BP14649 208 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 HNRNPA2B1P22626 353 aaKnown RBP0.76□□□□□ -2.29
CEP290-208ENST00000604024 TSPAN7P41732 249 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 SETQ01105 290 aaPredicted RBP0.76□□□□□ -2.29
CEP290-208ENST00000604024 CACNG1Q06432 222 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 TEFQ10587 303 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 ILF2Q12905 390 aaKnown RBP0.76□□□□□ -2.29
CEP290-208ENST00000604024 GRB14Q14449 540 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 PTPRCAPQ14761 206 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 PCK2Q16822 640 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 IRGCQ6NXR0 463 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 C2orf66Q6UXQ4 117 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 IKBIPQ70UQ0 350 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 ZBED6CLQ96FA7 236 aaPredicted RBP0.76□□□□□ -2.29
CEP290-208ENST00000604024 CFAP57Q96MR6 1250 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 ANKRD27Q96NW4 1050 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 BARD1Q99728 777 aaKnown RBP0.76□□□□□ -2.29
CEP290-208ENST00000604024 HSD17B14Q9BPX1 270 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 MAPKAP1Q9BPZ7 522 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 SRSF8Q9BRL6 282 aaKnown RBP0.76□□□□□ -2.29
CEP290-208ENST00000604024 PINK1Q9BXM7 581 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 SAGE1Q9NXZ1 904 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 PILRBQ9UKJ0 227 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 ABCC8Q09428 1581 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 UNC13AQ9UPW8 1703 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 ABCC10Q5T3U5 1492 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 TEX14Q8IWB6 1497 aa0.76□□□□□ -2.29
CEP290-208ENST00000604024 KIAA0586Q9BVV6 1533 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 ZNF608Q9ULD9 1512 aaPredicted RBP0.75□□□□□ -2.29
CEP290-208ENST00000604024 PCF11O94913 1555 aaKnown RBP0.75□□□□□ -2.29
CEP290-208ENST00000604024 CCT8L1PA6NM43 557 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 A8MVM7 634 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 RPS6KA5O75582 802 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 TOMM70O94826 608 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 VENTXO95231 258 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 MAPK12P53778 367 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 MFAP4P55083 255 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 OVGP1Q12889 678 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 NTRK2Q16620 822 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 C17orf58Q2M2W7 97 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 TMEM44Q2T9K0 475 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 MINDY1Q8N5J2 469 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 TSACCQ96A04 125 aaPredicted RBP0.75□□□□□ -2.29
CEP290-208ENST00000604024 PGM2Q96G03 612 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 RUNDC3BQ96NL0 473 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 KLHL5Q96PQ7 755 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 CCT8L2Q96SF2 557 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 CDRT15Q96T59 188 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 TBC1D22BQ9NU19 505 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 IRAK4Q9NWZ3 460 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 CLIC5Q9NZA1 410 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 MAPKBP1O60336 1514 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 SYNJ1O43426 1573 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 B4DLN1 442 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 MAGEB4O15481 346 aaPredicted RBP0.75□□□□□ -2.29
CEP290-208ENST00000604024 SERF1AO75920 110 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 FGF19O95750 216 aa0.75□□□□□ -2.29
CEP290-208ENST00000604024 SNRPCP09234 159 aaKnown RBP0.75□□□□□ -2.29
CEP290-208ENST00000604024 PFKFB1P16118 471 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms