RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 ARMC2Q8NEN0 867 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 TRPV3Q8NET8 790 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 ZCCHC10Q8TBK6 192 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 NT5CQ8TCD5 201 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 TMEM125Q96AQ2 219 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 MTFMTQ96DP5 389 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 KLHL1Q9NR64 748 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 ARL15Q9NXU5 204 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 ZFP69BQ9UJL9 534 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 ADAMTS6Q9UKP5 1117 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 TACC2O95359 2948 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 CPAMD8Q8IZJ3 1885 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 GOLGA6L10A0A0M3HER8 536 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 NPIPA5E9PKD4 350 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 E9PLN8 166 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 FAM227AF5H4B4 570 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 PRRG2O14669 202 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 NDUFS4O43181 175 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 OR1F1O43749 312 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 PRMT3O60678 531 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 NEURL1O76050 574 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 TRHRP34981 398 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 PMP22Q01453 160 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 BBS9Q3SYG4 887 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 SPANXN3Q5MJ09 141 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 FCRLBQ6BAA4 426 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 QSOX2Q6ZRP7 698 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 GALNTL5Q7Z4T8 443 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 CNTN4Q8IWV2 1026 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 ARMC10Q8N2F6 343 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 ANKRD7Q92527 254 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 ALKBH8Q96BT7 664 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 PDLIM5Q96HC4 596 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 FRMD6Q96NE9 622 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 SPOCK3Q9BQ16 436 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 MACROD1Q9BQ69 325 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 VKORC1Q9BQB6 163 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 CDCP1Q9H5V8 836 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 NPIPA1Q9UND3 350 aa16.73■□□□□ 0.27
SHKBP1-227ENST00000602011 SETD2Q9BYW2 2564 aaPredicted RBP16.72■□□□□ 0.27
SHKBP1-227ENST00000602011 FCHO1O14526 889 aa16.72■□□□□ 0.27
SHKBP1-227ENST00000602011 CHST10O43529 356 aa16.72■□□□□ 0.27
SHKBP1-227ENST00000602011 TSPAN12O95859 305 aa16.72■□□□□ 0.27
SHKBP1-227ENST00000602011 STATHP02808 62 aa16.72■□□□□ 0.27
SHKBP1-227ENST00000602011 ABOP16442 354 aa16.72■□□□□ 0.27
SHKBP1-227ENST00000602011 ADORA2A-AS1P86434 159 aa16.72■□□□□ 0.27
SHKBP1-227ENST00000602011 TIAL1Q01085 375 aaKnown RBP eCLIP16.72■□□□□ 0.27
SHKBP1-227ENST00000602011 CRYMQ14894 314 aa16.72■□□□□ 0.27
SHKBP1-227ENST00000602011 MAPKAPK3Q16644 382 aa16.72■□□□□ 0.27
SHKBP1-227ENST00000602011 SIAH3Q8IW03 269 aa16.72■□□□□ 0.27
SHKBP1-227ENST00000602011 ZNF740Q8NDX6 193 aa16.72■□□□□ 0.27
SHKBP1-227ENST00000602011 FBXL8Q96CD0 374 aa16.72■□□□□ 0.27
SHKBP1-227ENST00000602011 C14orf79Q96F83 325 aa16.72■□□□□ 0.27
SHKBP1-227ENST00000602011 LINGO1Q96FE5 620 aa16.72■□□□□ 0.27
SHKBP1-227ENST00000602011 PTCHD1Q96NR3 888 aa16.72■□□□□ 0.27
SHKBP1-227ENST00000602011 NPAS2Q99743 824 aa16.72■□□□□ 0.27
SHKBP1-227ENST00000602011 OR2W5A6NFC9 320 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 KLRC4-KLRK1H3BQV0 150 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 PSMD12O00232 456 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 PGRMC1O00264 195 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 NME2P1O60361 137 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 SLC25A12O75746 678 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 AHSGP02765 367 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 ZNF24P17028 368 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 NME2P22392 152 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 SCTRP47872 440 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 ST13P50502 369 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 HLCSP50747 726 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 SNRPNP63162 240 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 ILF2Q12905 390 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 PDAP1Q13442 181 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 CDSNQ15517 529 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 TERF2Q15554 542 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 DEFB134Q4QY38 66 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 LRRC8AQ8IWT6 810 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 SLC5A11Q8WWX8 675 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 AIF1LQ9BQI0 150 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 TRIM51Q9BSJ1 452 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 PELI2Q9HAT8 420 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 PRDM9Q9NQV7 894 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 ANKRD10Q9NXR5 420 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 TINAGQ9UJW2 476 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 KLF13Q9Y2Y9 288 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 VWA7Q9Y334 891 aa16.71■□□□□ 0.27
SHKBP1-227ENST00000602011 C19orf84I3L1E1 186 aa16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 CDC123O75794 336 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 RNH1P13489 461 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 HPDP32754 393 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 MLF1P58340 268 aa16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 PHKG1Q16816 387 aa16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 ZNF295-AS1Q8N0V1 137 aa16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 AGGF1Q8N302 714 aaeCLIP16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 ACTRT1Q8TDG2 376 aa16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 TSLPQ969D9 159 aa16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 SEC16BQ96JE7 1060 aa16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 NDNQ99608 321 aa16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 DEFB126Q9BYW3 111 aa16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 TRIM8Q9BZR9 551 aa16.7■□□□□ 0.26
SHKBP1-227ENST00000602011 COQ3Q9NZJ6 369 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms