RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 PGAM1P18669 254 aa16.26■□□□□ 0.19
RETREG3-210ENST00000590541 CLCN7P51798 805 aa16.26■□□□□ 0.19
RETREG3-210ENST00000590541 PPP2R2AP63151 447 aa16.26■□□□□ 0.19
RETREG3-210ENST00000590541 TSTA3Q13630 321 aaPredicted RBP16.26■□□□□ 0.19
RETREG3-210ENST00000590541 KLHL38Q2WGJ6 581 aa16.26■□□□□ 0.19
RETREG3-210ENST00000590541 SFT2D3Q587I9 215 aa16.26■□□□□ 0.19
RETREG3-210ENST00000590541 TMEM211Q6ICI0 200 aa16.26■□□□□ 0.19
RETREG3-210ENST00000590541 FBXO15Q8NCQ5 510 aaPredicted RBP16.26■□□□□ 0.19
RETREG3-210ENST00000590541 KCNJ16Q9NPI9 418 aa16.26■□□□□ 0.19
RETREG3-210ENST00000590541 UTP6Q9NYH9 597 aaKnown RBP16.26■□□□□ 0.19
RETREG3-210ENST00000590541 FBXO5Q9UKT4 447 aa16.26■□□□□ 0.19
RETREG3-210ENST00000590541 ACANP16112 2415 aa16.26■□□□□ 0.19
RETREG3-210ENST00000590541 CDK2AP1O14519 115 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 CCNDBP1O95273 360 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 MPC1LP0DKB6 136 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 IL1RNP18510 177 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 TPP2P29144 1249 aaPredicted RBP16.25■□□□□ 0.19
RETREG3-210ENST00000590541 BCL6P41182 706 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 SLC26A5P58743 744 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 RHAGQ02094 409 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 FOLH1Q04609 750 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 FOXD4Q12950 439 aaPredicted RBP16.25■□□□□ 0.19
RETREG3-210ENST00000590541 CTBP1Q13363 440 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 USP10Q14694 798 aaKnown RBP16.25■□□□□ 0.19
RETREG3-210ENST00000590541 ACSBG2Q5FVE4 666 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 LRRC8EQ6NSJ5 796 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 UGT3A1Q6NUS8 523 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 VN1R4Q7Z5H5 301 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 ADCK2Q7Z695 626 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 RPS19BP1Q86WX3 136 aaKnown RBP16.25■□□□□ 0.19
RETREG3-210ENST00000590541 CCDC71Q8IV32 467 aaPredicted RBP16.25■□□□□ 0.19
RETREG3-210ENST00000590541 PPFIBP2Q8ND30 876 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 ELP5Q8TE02 316 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 RND1Q92730 232 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 PDLIM2Q96JY6 352 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 PKP4Q99569 1192 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 LPAR4Q99677 370 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 DDX47Q9H0S4 455 aaKnown RBP16.25■□□□□ 0.19
RETREG3-210ENST00000590541 LIME1Q9H400 295 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 TRIM45Q9H8W5 580 aaPredicted RBP16.25■□□□□ 0.19
RETREG3-210ENST00000590541 RNF14Q9UBS8 474 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 RPH3AQ9Y2J0 694 aaPredicted RBP16.25■□□□□ 0.19
RETREG3-210ENST00000590541 DHRS7Q9Y394 339 aa16.25■□□□□ 0.19
RETREG3-210ENST00000590541 FBN3Q75N90 2809 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 TMEM200CA6NKL6 621 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 SGK494L7N484 410 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 NDC80O14777 642 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 ZWINTO95229 277 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 TFEBP19484 476 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 SKIV2L2P42285 1042 aaKnown RBP16.24■□□□□ 0.19
RETREG3-210ENST00000590541 SLC1A2P43004 574 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 PNLIPRP1P54315 467 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 TAS2R50P59544 299 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 GNG11P61952 73 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 MYBPHQ13203 477 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 KCTD19Q17RG1 926 aaPredicted RBP16.24■□□□□ 0.19
RETREG3-210ENST00000590541 DENND6AQ8IWF6 608 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 KIF2BQ8N4N8 673 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 POGLUT1Q8NBL1 392 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 PLPP5Q8NEB5 264 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 MCOLN3Q8TDD5 553 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 LRRC39Q96DD0 335 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 EBNA1BP2Q99848 306 aaKnown RBP16.24■□□□□ 0.19
RETREG3-210ENST00000590541 MACROD1Q9BQ69 325 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 TP63Q9H3D4 680 aaPredicted RBP16.24■□□□□ 0.19
RETREG3-210ENST00000590541 FBXO6Q9NRD1 293 aaPredicted RBP16.24■□□□□ 0.19
RETREG3-210ENST00000590541 SAR1BQ9Y6B6 198 aa16.24■□□□□ 0.19
RETREG3-210ENST00000590541 E7ENX8 843 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 CCDC188H7C350 402 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 TFECO14948 347 aaPredicted RBP16.23■□□□□ 0.19
RETREG3-210ENST00000590541 ZBTB14O43829 449 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 HS6ST1O60243 411 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 KLK8O60259 260 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 SLC16A8O95907 504 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 RFC3P40938 356 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 PAFAH1B1P43034 410 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 CYB561P49447 251 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 MEOX1P50221 254 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 ITGA8P53708 1063 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 ABATP80404 500 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 TAP2Q03519 686 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 ACTN3Q08043 901 aaPredicted RBP16.23■□□□□ 0.19
RETREG3-210ENST00000590541 CRYMQ14894 314 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 MORF4L2Q15014 288 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 ABRAXAS2Q15018 415 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 NSDHLQ15738 373 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 CEBPEQ15744 281 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 HSP90AA5PQ58FG0 334 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 CMPK2Q5EBM0 449 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 EMC4Q5J8M3 183 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 SPANXN3Q5MJ09 141 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 TMEM214Q6NUQ4 689 aaKnown RBP16.23■□□□□ 0.19
RETREG3-210ENST00000590541 KIAA0408Q6ZU52 694 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 GALNT7Q86SF2 657 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 PDSS2Q86YH6 399 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 PDIK1LQ8N165 341 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 AGGF1Q8N302 714 aaeCLIP16.23■□□□□ 0.19
RETREG3-210ENST00000590541 ZNF480Q8WV37 535 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 ASB11Q8WXH4 323 aa16.23■□□□□ 0.19
RETREG3-210ENST00000590541 TSLPQ969D9 159 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms