RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 ZNF639Q9UID6 485 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 FZD4Q9ULV1 537 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 ADAMTS5Q9UNA0 930 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 HCN4Q9Y3Q4 1203 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 SPO11Q9Y5K1 396 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 H3BNC9 293 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 M0R2N6 131 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 OR1I1O60431 355 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 UGDHO60701 494 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 SLITRK5O94991 958 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 ECHS1P30084 290 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 MECP2P51608 486 aaKnown RBP11.57□□□□□ -0.56
NEK9-210ENST00000557026 E2F1Q01094 437 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 PLCXD2Q0VAA5 305 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 QPCTQ16769 361 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 USP30Q70CQ3 517 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 CILP2Q8IUL8 1156 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 OR10G2Q8NGC3 310 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 SLC25A36Q96CQ1 311 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 PTCHD1Q96NR3 888 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 MTERF1Q99551 399 aaKnown RBP11.57□□□□□ -0.56
NEK9-210ENST00000557026 SLC24A3Q9HC58 644 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 AKAP12Q02952 1782 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 A8MUI8 341 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 UGT1A9O60656 530 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 NIPSNAP2O75323 286 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 UGT1A6P19224 532 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 RPS3P23396 243 aaKnown RBP eCLIP11.56□□□□□ -0.56
NEK9-210ENST00000557026 ACVRL1P37023 503 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 KCNJ11Q14654 390 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 CSNK1A1LQ8N752 337 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.56□□□□□ -0.564e-6■■■□□ 16
NEK9-210ENST00000557026 ADAD1Q96M93 576 aaKnown RBP11.56□□□□□ -0.56
NEK9-210ENST00000557026 CGREF1Q99674 301 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 EBPLQ9BY08 206 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 UGT1A7Q9HAW7 530 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 UGT1A10Q9HAW8 530 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 UGT1A8Q9HAW9 530 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 EXOSC1Q9Y3B2 195 aaKnown RBP11.56□□□□□ -0.56
NEK9-210ENST00000557026 TRIM64A6NGJ6 449 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 PCDHGA12O60330 932 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 DLX3O60479 287 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 PGM3O95394 542 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 RLN1P04808 185 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 RPLP0P05388 317 aaKnown RBP11.56□□□□□ -0.56
NEK9-210ENST00000557026 MLLT1Q03111 559 aaPredicted RBP11.56□□□□□ -0.56
NEK9-210ENST00000557026 PLEKHN1Q494U1 663 aaPredicted RBP11.56□□□□□ -0.56
NEK9-210ENST00000557026 GXYLT1Q4G148 440 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 SLC39A4Q6P5W5 647 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 LIX1LQ8IVB5 337 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 GALNT12Q8IXK2 581 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 ZNF548Q8NEK5 533 aaPredicted RBP11.56□□□□□ -0.56
NEK9-210ENST00000557026 OR10A6Q8NH74 314 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 ZNF516Q92618 1163 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 ZNF570Q96NI8 536 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 EGFL7Q9UHF1 273 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 NXT1Q9UKK6 140 aaKnown RBP11.56□□□□□ -0.56
NEK9-210ENST00000557026 FAM240BA0A1B0GVZ2 78 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 EFCAB9A8MZ26 197 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 GPR32O75388 356 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 KLK1P06870 262 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 SLC6A9P48067 706 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 FOLH1Q04609 750 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 MLC1Q15049 377 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 GRHL2Q6ISB3 625 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 ZNF100Q8IYN0 542 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 KAT8Q9H7Z6 458 aaKnown RBP11.56□□□□□ -0.56
NEK9-210ENST00000557026 KCPQ6ZWJ8 1503 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 E7EQ34 232 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 SCGNO76038 276 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 MT-ND2P03891 347 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 PROS1P07225 676 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 THEGLP0DJG4 465 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 FPR1P21462 350 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 ITGB7P26010 798 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 ACRV1P26436 265 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 AQP1P29972 269 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 PTCHD3Q3KNS1 767 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 UBAP2Q5T6F2 1119 aaKnown RBP11.56□□□□□ -0.56
NEK9-210ENST00000557026 TP53INP1Q96A56 240 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 NODALQ96S42 347 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 UCK2Q9BZX2 261 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 ABCG8Q9H221 673 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 WDR55Q9H6Y2 383 aaPredicted RBP11.56□□□□□ -0.56
NEK9-210ENST00000557026 TNFRSF10DQ9UBN6 386 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 AFDNP55196 1824 aaKnown RBP11.56□□□□□ -0.56
NEK9-210ENST00000557026 CIB4A0PJX0 185 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 IQCF5A8MTL0 148 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 B4GALT2O60909 372 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 STC2O76061 302 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 TGFB1P01137 390 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 C9P02748 559 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 EPCAMP16422 314 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 CLRN1P58418 232 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 E2F2Q14209 437 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 GPR68Q15743 365 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 PKDCCQ504Y2 493 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 BAIAP2L2Q6UXY1 529 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 ZNF765Q7L2R6 523 aa11.56□□□□□ -0.56
NEK9-210ENST00000557026 ZNF565Q8N9K5 539 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 640.2 ms