RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 IQCGQ9H095 443 aaKnown RBP12.17□□□□□ -0.46
VEGFA-224ENST00000523873 ANKHQ9HCJ1 492 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 MKS1Q9NXB0 559 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 KCND3Q9UK17 655 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 TCFL5Q9UL49 500 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 PLLPQ9Y342 182 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 NAALAD2Q9Y3Q0 740 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 PCDHGA6Q9Y5G7 932 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 CLEC3AO75596 197 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 KLF7O75840 302 aaPredicted RBP12.16□□□□□ -0.46
VEGFA-224ENST00000523873 OR4F21O95013 312 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 CLDN9O95484 217 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 ONECUT2O95948 504 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 SERPINA6P08185 405 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 CPA3P15088 417 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 IMPDH1P20839 514 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 FOLR3P41439 243 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 AVPR1BP47901 424 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 NEK2P51955 445 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 CLCQ05315 142 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 PCDH1Q08174 1060 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 FAM53BQ14153 422 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 ZRSR2Q15696 482 aaKnown RBP12.16□□□□□ -0.46
VEGFA-224ENST00000523873 NKG7Q16617 165 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 TNFAIP8L3Q5GJ75 292 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 LIPJQ5W064 366 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 GPR155Q7Z3F1 870 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 SLC22A9Q8IVM8 553 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 C10orf107Q8IVU9 208 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 LAS2Q8IYD9 372 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 AFAP1L2Q8N4X5 818 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 CCNYL1Q8N7R7 359 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 ZSCAN1Q8NBB4 408 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 OR7G3Q8NG95 312 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 OR5T3Q8NGG3 340 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 ZNF473Q8WTR7 871 aaKnown RBP12.16□□□□□ -0.46
VEGFA-224ENST00000523873 MTFMTQ96DP5 389 aaKnown RBP12.16□□□□□ -0.46
VEGFA-224ENST00000523873 L3HYPDHQ96EM0 354 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 F2RL3Q96RI0 385 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 MECRQ9BV79 373 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 GPR87Q9BY21 358 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 RBCK1Q9BYM8 510 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 RHBGQ9H310 441 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 GSTO2Q9H4Y5 243 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 TRPC4Q9UBN4 977 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 ZNF225Q9UK10 706 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 CDC14AQ9UNH5 594 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 SLC22A7Q9Y694 548 aa12.16□□□□□ -0.46
VEGFA-224ENST00000523873 ANKRD11Q6UB99 2663 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-224ENST00000523873 CROCCQ5TZA2 2017 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 LRIT2A6NDA9 550 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 SAP18O00422 153 aaKnown RBP12.15□□□□□ -0.46
VEGFA-224ENST00000523873 ERI3O43414 337 aaKnown RBP12.15□□□□□ -0.46
VEGFA-224ENST00000523873 TYROBPO43914 113 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 GALR3O60755 368 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-224ENST00000523873 JRKO75564 520 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 NSA2O95478 260 aaKnown RBP12.15□□□□□ -0.46
VEGFA-224ENST00000523873 TGFB1P01137 390 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 UMODP07911 640 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 SMIM10L1P0DMW3 83 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 PIM1P11309 404 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-224ENST00000523873 H2AFXP16104 143 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-224ENST00000523873 ALOX12P18054 663 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 ALDH3A1P30838 453 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 OTX2P32243 289 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 DSG2Q14126 1118 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 TCHHL1Q5QJ38 904 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-224ENST00000523873 LETMD1Q6P1Q0 360 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 METTL2BQ6P1Q9 378 aaKnown RBP12.15□□□□□ -0.46
VEGFA-224ENST00000523873 MILR1Q7Z6M3 343 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 SYVN1Q86TM6 617 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 ZC3H7AQ8IWR0 971 aaKnown RBP12.15□□□□□ -0.46
VEGFA-224ENST00000523873 L3MBTL4Q8NA19 623 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 TTLQ8NG68 377 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 HUS1BQ8NHY5 278 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 STT3BQ8TCJ2 826 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 FKBP10Q96AY3 582 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 MS4A6EQ96DS6 147 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 MVB12AQ96EY5 273 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 SMIM10Q96HG1 83 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 MTERF1Q99551 399 aaKnown RBP12.15□□□□□ -0.46
VEGFA-224ENST00000523873 SPSB2Q99619 263 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 MESP1Q9BRJ9 268 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 NTMT1Q9BV86 223 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 MS4A8Q9BY19 250 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 PITHD1Q9GZP4 211 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-224ENST00000523873 LHX6Q9UPM6 363 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 PADI2Q9Y2J8 665 aa12.15□□□□□ -0.46
VEGFA-224ENST00000523873 OR2W5A6NFC9 320 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 VSTM2BA6NLU5 285 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 MAGEB17A8MXT2 336 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 H0YIG0 161 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 AGPSO00116 658 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 MASP2O00187 686 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 RTCAO00442 366 aaKnown RBP12.14□□□□□ -0.47
VEGFA-224ENST00000523873 UGDHO60701 494 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 ETHE1O95571 254 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 ZGLP1P0C6A0 271 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 EFNA3P52797 238 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 PLA2G16P53816 162 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms