RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 MAZP56270 477 aaKnown RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 SLC8A3P57103 927 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 GSDMDP57764 484 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 POLR2FP61218 127 aaKnown RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 IRX1P78414 480 aaPredicted RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 MYL7Q01449 175 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 AKAP17AQ02040 695 aaKnown RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 GFPT1Q06210 699 aaPredicted RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 SULT2A1Q06520 285 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 ILF2Q12905 390 aaKnown RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 HNRNPDQ14103 355 aaKnown RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 SLC1A5Q15758 541 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 MAPK11Q15759 364 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 CA9Q16790 459 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 HLA-BQ31612 363 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 ITPRIPL2Q3MIP1 535 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 MCMDC2Q4G0Z9 681 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 HSP90AA5PQ58FG0 334 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 SLC35D3Q5M8T2 416 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 FFAR4Q5NUL3 377 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 SUSD4Q5VX71 490 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 GALNT17Q6IS24 598 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 PSRC1Q6PGN9 363 aaPredicted RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 PRSS55Q6UWB4 352 aaPredicted RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 BTNL8Q6UX41 500 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 MFSD7Q6UXD7 560 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 TOM1L2Q6ZVM7 507 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 ARHGAP22Q7Z5H3 698 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 ANKRD46Q86W74 232 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 TMEM139Q8IV31 216 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 SERPINA12Q8IW75 414 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 BATF2Q8N1L9 274 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 THAP8Q8NA92 274 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 ZNF540Q8NDQ6 660 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 CCDC110Q8TBZ0 833 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 RNASE8Q8TDE3 154 aaKnown RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 PRCCQ92733 491 aaPredicted RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 PROX1Q92786 737 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 AP2M1Q96CW1 435 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 MRPL38Q96DV4 380 aaKnown RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 TRIM44Q96DX7 344 aaPredicted RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 THOC1Q96FV9 657 aaKnown RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 EPSTI1Q96J88 318 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 RASL10BQ96S79 203 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 LITAFQ99732 161 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 NKX3-1Q99801 234 aaPredicted RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 C17orf62Q9BQA9 187 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 FAM213AQ9BRX8 229 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 FUCA2Q9BTY2 467 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 CDK19Q9BWU1 502 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 TEX13AQ9BXU3 409 aaPredicted RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 LAT2Q9GZY6 243 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 NAPBQ9H115 298 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 UBQLN3Q9H347 655 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 SNX25Q9H3E2 840 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 CPVLQ9H3G5 476 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 SDR39U1Q9NRG7 319 aaPredicted RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 FAM207AQ9NSI2 230 aaPredicted RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 BARHL2Q9NY43 387 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 KLHL8Q9P2G9 620 aaPredicted RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 KCNN3Q9UGI6 736 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 DAPK2Q9UIK4 370 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 AURKCQ9UQB9 309 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 MRPS28Q9Y2Q9 187 aaKnown RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 STRAPQ9Y3F4 350 aaKnown RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 RIPK3Q9Y572 518 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 SELENOKQ9Y6D0 94 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 CLCA3PQ9Y6N3 262 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 AP1M2Q9Y6Q5 423 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 RNF215Q9Y6U7 377 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 WDR81Q562E7 1941 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 A0A087X0K7 114 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 ARHGAP42A6NI28 874 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 TMEM150CB9EJG8 249 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 K7EPI3 171 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 ZNF197O14709 1029 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 ANGPT2O15123 496 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 ARPC2O15144 300 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 SCO2O43819 266 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 SSX5O60225 188 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 SNX3O60493 162 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 GLRA3O75311 464 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 RPS6KA5O75582 802 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 CXCL14O95715 111 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 GSRP00390 522 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 CXCL10P02778 98 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 MMP10P09238 476 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 SBK2P0C263 348 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 ANKRD34CP0C6C1 535 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 FRMD6-AS1P0C7T7 363 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 CFC1BP0CG36 223 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 CFC1P0CG37 223 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 SMIM18P0DKX4 95 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 CEACAM1P13688 526 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 ETS1P14921 441 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 CEBPBP17676 345 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 CYP2A7P20853 494 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 JAK1P23458 1154 aa2.11□□□□□ -2.07
LMNB1-207ENST00000494185 ADSSP30520 456 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms