RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 FAM110DQ8TAY7 271 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-206ENST00000471968 ZCCHC10Q8TBK6 192 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 TAF15Q92804 592 aaKnown RBP eCLIP5.98□□□□□ -1.45
HDAC3-206ENST00000471968 UCN3Q969E3 161 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 ALKBH8Q96BT7 664 aaKnown RBP5.98□□□□□ -1.45
HDAC3-206ENST00000471968 LINC00615Q96LM1 132 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-206ENST00000471968 ZFP3Q96NJ6 502 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 SRPK1Q96SB4 655 aaKnown RBP5.98□□□□□ -1.45
HDAC3-206ENST00000471968 TM9SF2Q99805 663 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 SLC39A3Q9BRY0 314 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 SUCNR1Q9BXA5 334 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 RBCK1Q9BYM8 510 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 XPO4Q9C0E2 1151 aaKnown RBP5.98□□□□□ -1.45
HDAC3-206ENST00000471968 OPN3Q9H1Y3 402 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-206ENST00000471968 ACBD3Q9H3P7 528 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 C12orf49Q9H741 205 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 ACKR4Q9NPB9 350 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 IL26Q9NPH9 171 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 LUC7LQ9NQ29 371 aaKnown RBP5.98□□□□□ -1.45
HDAC3-206ENST00000471968 ELOVL5Q9NYP7 299 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 DMGDHQ9UI17 866 aaKnown RBP5.98□□□□□ -1.45
HDAC3-206ENST00000471968 DNAJC12Q9UKB3 198 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 RNF112Q9ULX5 631 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 MAPRE3Q9UPY8 281 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 PLCE1Q9P212 2302 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 A0A1W2PNV4 684 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 LRP5LA4QPB2 252 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 CFAP99D6REC4 459 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 H0YGG7 62 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 TIMM23O14925 209 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 AURKAO14965 403 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 SGTAO43765 313 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 OR2J2O76002 312 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 PPP1R3DO95685 299 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 CD48P09326 243 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 ZNF23P17027 643 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 MDKP21741 143 aaPredicted RBP5.97□□□□□ -1.45
HDAC3-206ENST00000471968 PCMT1P22061 227 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 PCK1P35558 622 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 SOX3P41225 446 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 AVPR1BP47901 424 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 EMP3P54852 163 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 CDH6P55285 790 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 ARF3P61204 181 aaPredicted RBP5.97□□□□□ -1.45
HDAC3-206ENST00000471968 KRT85P78386 507 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 MPP1Q00013 466 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 RHAGQ02094 409 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 NIPAL4Q0D2K0 466 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 GAB1Q13480 694 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 PPP1R15BQ5SWA1 713 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 FAM173BQ6P4H8 233 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 GJB7Q6PEY0 223 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 RNF44Q7L0R7 432 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 ADGRE4PQ86SQ3 457 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 DTX2Q86UW9 622 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 GALNT12Q8IXK2 581 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 GPALPP1Q8IXQ4 340 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 CSNK1A1LQ8N752 337 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 CNEP1R1Q8N9A8 125 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 OR9A4Q8NGU2 314 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 OR51Q1Q8NH59 317 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 KCTD4Q8WVF5 259 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 ZUFSPQ96AP4 578 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 SLC22A18Q96BI1 424 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 ZSCAN31Q96LW9 406 aaPredicted RBP5.97□□□□□ -1.45
HDAC3-206ENST00000471968 SLC6A7Q99884 636 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 PIMREGQ9BSJ6 248 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 AARSD1Q9BTE6 412 aaKnown RBP5.97□□□□□ -1.45
HDAC3-206ENST00000471968 ADGRE3Q9BY15 652 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 GRIP2Q9C0E4 1043 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 LIN28AQ9H9Z2 209 aaKnown RBP5.97□□□□□ -1.45
HDAC3-206ENST00000471968 SACM1LQ9NTJ5 587 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 ZNHIT6Q9NWK9 470 aaKnown RBP5.97□□□□□ -1.45
HDAC3-206ENST00000471968 UBP1Q9NZI7 540 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 CIDEBQ9UHD4 219 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 POLG2Q9UHN1 485 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 SH2B3Q9UQQ2 575 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 YARS2Q9Y2Z4 477 aaKnown RBP5.97□□□□□ -1.45
HDAC3-206ENST00000471968 ATG4BQ9Y4P1 393 aa5.97□□□□□ -1.45
HDAC3-206ENST00000471968 ESYT3A0FGR9 886 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 TARM1B6A8C7 271 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 PMM2O15305 246 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 FRS3O43559 492 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 PRPSAP2O60256 369 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 TSPAN15O95858 294 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 P04436 131 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 CD3EP07766 207 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 CCL3P10147 92 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 CYP4B1P13584 511 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 IL1R2P27930 398 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 CDH5P33151 784 aaPredicted RBP5.96□□□□□ -1.46
HDAC3-206ENST00000471968 PIGAP37287 484 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 BCL6P41182 706 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 AIF1P55008 147 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 SNRPNP63162 240 aaKnown RBP5.96□□□□□ -1.46
HDAC3-206ENST00000471968 EEF1A1P68104 462 aaKnown RBP5.96□□□□□ -1.46
HDAC3-206ENST00000471968 HYAL2Q12891 473 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 MAMLD1Q13495 774 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 XKR6Q5GH73 641 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 DCST1Q5T197 706 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms