RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SIDT2Q8NBJ9 832 aaKnown RBP4.68□□□□□ -1.66
GABPB1-204ENST00000396464 B3GALNT2Q8NCR0 500 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 C7orf57Q8NEG2 295 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 SPATA4Q8NEY3 305 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 U2AF1L4Q8WU68 220 aaKnown RBP4.68□□□□□ -1.66
GABPB1-204ENST00000396464 PIBF1Q8WXW3 757 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 RNF183Q96D59 192 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 ZBED3Q96IU2 234 aaPredicted RBP4.68□□□□□ -1.66
GABPB1-204ENST00000396464 GFI1Q99684 422 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 RTP3Q9BQQ7 232 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 UQCC2Q9BRT2 126 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 ROPN1BQ9BZX4 212 aaPredicted RBP4.68□□□□□ -1.66
GABPB1-204ENST00000396464 NSRP1Q9H0G5 558 aaKnown RBP4.68□□□□□ -1.66
GABPB1-204ENST00000396464 DNTTIP1Q9H147 329 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 SLC26A1Q9H2B4 701 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 ZNF768Q9H5H4 540 aaKnown RBP4.68□□□□□ -1.66
GABPB1-204ENST00000396464 DCLRE1BQ9H816 532 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 MEAF6Q9HAF1 191 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 HINT3Q9NQE9 182 aaKnown RBP4.68□□□□□ -1.66
GABPB1-204ENST00000396464 PDGFCQ9NRA1 345 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 ACSS1Q9NUB1 689 aaPredicted RBP4.68□□□□□ -1.66
GABPB1-204ENST00000396464 EHD3Q9NZN3 535 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 VPS54Q9P1Q0 977 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 NARFQ9UHQ1 456 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 GRIP1Q9Y3R0 1128 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 SIRT4Q9Y6E7 314 aaPredicted RBP4.68□□□□□ -1.66
GABPB1-204ENST00000396464 SLCO1B1Q9Y6L6 691 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 PCSK5Q92824 1860 aa4.68□□□□□ -1.66
GABPB1-204ENST00000396464 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.67□□□□□ -1.66
GABPB1-204ENST00000396464 ERICH2A1L162 156 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 NEMP2A6NFY4 417 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 OR6C75A6NL08 312 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 EIF4E1BA6NMX2 242 aaKnown RBP4.67□□□□□ -1.66
GABPB1-204ENST00000396464 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.67□□□□□ -1.66
GABPB1-204ENST00000396464 UBE2Q2LH0YL09 131 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 GOLGA8TH3BQL2 631 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 PSMD11O00231 422 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 ABCD4O14678 606 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 MSI1O43347 362 aaKnown RBP4.67□□□□□ -1.66
GABPB1-204ENST00000396464 KRT36O76013 467 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 CLPXO76031 633 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 TGM6O95932 706 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 MOCS2O96007 188 aaPredicted RBP4.67□□□□□ -1.66
GABPB1-204ENST00000396464 LDLRP01130 860 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 UMPSP11172 480 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 GNSP15586 552 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 EPCAMP16422 314 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 CYP2B6P20813 491 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 UQCRC2P22695 453 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 FPR3P25089 353 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 DPP4P27487 766 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 FDFT1P37268 417 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 TNFRSF4P43489 277 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 RPS5P46782 204 aaKnown RBP4.67□□□□□ -1.66
GABPB1-204ENST00000396464 PPT1P50897 306 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 MYL6P60660 151 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 RPS15P62841 145 aaKnown RBP4.67□□□□□ -1.66
GABPB1-204ENST00000396464 OTUD4Q01804 1114 aaKnown RBP4.67□□□□□ -1.66
GABPB1-204ENST00000396464 CFHR3Q02985 330 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 CSTF1Q05048 431 aaKnown RBP4.67□□□□□ -1.66
GABPB1-204ENST00000396464 CACNG1Q06432 222 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 RASGEF1BQ0VAM2 473 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 ZNF177Q13360 481 aaPredicted RBP4.67□□□□□ -1.66
GABPB1-204ENST00000396464 ENPP2Q13822 863 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 MFSD13AQ14CX5 517 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 TRIP10Q15642 601 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 HNRNPA1L2Q32P51 320 aaKnown RBP4.67□□□□□ -1.66
GABPB1-204ENST00000396464 CMPK2Q5EBM0 449 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 PCID2Q5JVF3 399 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 WLSQ5T9L3 541 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 TEDDM1Q5T9Z0 273 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 CAPRIN2Q6IMN6 1127 aaKnown RBP4.67□□□□□ -1.66
GABPB1-204ENST00000396464 FAM166AQ6J272 317 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 PYHIN1Q6K0P9 492 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 ZSCAN25Q6NSZ9 544 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 BLOC1S2Q6QNY1 142 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 TPRG1Q6ZUI0 275 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 Q6ZWC4 215 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 TMPRSS11FQ6ZWK6 438 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 ANO5Q75V66 913 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 TMPRSS11BQ86T26 416 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 ANKFN1Q8N957 763 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 PAPD5Q8NDF8 572 aaKnown RBP4.67□□□□□ -1.66
GABPB1-204ENST00000396464 OR5D13Q8NGL4 314 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 TRMT10AQ8TBZ6 339 aaKnown RBP4.67□□□□□ -1.66
GABPB1-204ENST00000396464 LKAAEAR1Q8TD35 194 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 SAP25Q8TEE9 199 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 MITD1Q8WV92 249 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 ASZ1Q8WWH4 475 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 ANKRD7Q92527 254 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 CELF1Q92879 486 aaKnown RBP4.67□□□□□ -1.66
GABPB1-204ENST00000396464 P2RX5Q93086 422 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 FKBP10Q96AY3 582 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 LRRC45Q96CN5 670 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 HAVCR1Q96D42 359 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 MYEOVQ96EZ4 313 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 PGBD1Q96JS3 809 aa4.67□□□□□ -1.66
GABPB1-204ENST00000396464 CCNL2Q96S94 520 aaPredicted RBP4.67□□□□□ -1.66
GABPB1-204ENST00000396464 MTERF1Q99551 399 aaKnown RBP4.67□□□□□ -1.66
GABPB1-204ENST00000396464 CHRDL1Q9BU40 450 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms