RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 KREMEN1Q96MU8 473 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 HAPLN3Q96S86 360 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 CLDND1Q9NY35 253 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 B3GNT2Q9NY97 397 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 RPH3ALQ9UNE2 315 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 ARHGEF17Q96PE2 2063 aaPredicted RBP11.72□□□□□ -0.53
PCF11-201ENST00000298281 A0A0A6YYH2 397 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 A6NJ64 397 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 DISC1C4P0D8 188 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 ZNF670-ZNF695F2Z2N8 137 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 IRAK2O43187 625 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 NDUFA6P56556 154 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 ERVK-16P61578 105 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 REP15Q6BDI9 236 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 OGFOD2Q6N063 350 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 FTMTQ8N4E7 242 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 OR1F2PQ96R84 312 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 GNB4Q9HAV0 340 aa11.72□□□□□ -0.53
PCF11-201ENST00000298281 NDUFS4O43181 175 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 LCMT2O60294 686 aaKnown RBP11.71□□□□□ -0.53
PCF11-201ENST00000298281 RPLP0P05388 317 aaKnown RBP11.71□□□□□ -0.53
PCF11-201ENST00000298281 PEPDP12955 493 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 GBE1Q04446 702 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 ZC3HC1Q86WB0 502 aaKnown RBP11.71□□□□□ -0.53
PCF11-201ENST00000298281 ZDHHC21Q8IVQ6 265 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 PCDHB18PQ96TA0 734 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 STXBP5LQ9Y2K9 1186 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 TIMM22Q9Y584 194 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 GABRDO14764 452 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 B4GALT2O60909 372 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 RPS14P62263 151 aaKnown RBP11.71□□□□□ -0.53
PCF11-201ENST00000298281 TLE1Q04724 770 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 SGCAQ16586 387 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 LRIF1Q5T3J3 769 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 TMEM220Q6QAJ8 160 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 SNX29P2Q8IUI4 249 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 PEX13Q92968 403 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 SDCBP2Q9H190 292 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 MOV10Q9HCE1 1003 aaKnown RBP11.71□□□□□ -0.53
PCF11-201ENST00000298281 CD320Q9NPF0 282 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 TVP23BQ9NYZ1 205 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 E7ESA3 106 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 SNAPC5O75971 98 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 RBM20Q5T481 1227 aaKnown RBP11.71□□□□□ -0.53
PCF11-201ENST00000298281 MBOAT1Q6ZNC8 495 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 IQCF1Q8N6M8 205 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 LRRN4CLQ8ND94 238 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 OR4D6Q8NGJ1 314 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 TCTEX1D2Q8WW35 142 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 GTF2IRD1Q9UHL9 959 aa11.71□□□□□ -0.53
PCF11-201ENST00000298281 SOX1O00570 391 aaPredicted RBP11.71□□□□□ -0.54
PCF11-201ENST00000298281 TNFSF4P23510 183 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 PAX6P26367 422 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 NPBWR1P48145 328 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 CCR8P51685 355 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 ADAM15Q13444 863 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 KANK2Q63ZY3 851 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 IL31RAQ8NI17 732 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 KCTD13Q8WZ19 329 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 BPIFA2Q96DR5 249 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 SLC6A7Q99884 636 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 GINS3Q9BRX5 216 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 ADAP2Q9NPF8 381 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 GRHPRQ9UBQ7 328 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 TP53TG5Q9Y2B4 290 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 MDC1Q14676 2089 aaKnown RBP11.71□□□□□ -0.54
PCF11-201ENST00000298281 OR6C70A6NIJ9 312 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 B4GAT1O43505 415 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 RAB36O95755 333 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 RAP2AP10114 183 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 CDH12P55289 794 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 HTD2P86397 168 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 DSC2Q02487 901 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 LRRC32Q14392 662 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 SWT1Q5T5J6 900 aaKnown RBP11.71□□□□□ -0.54
PCF11-201ENST00000298281 KIAA0930Q6ICG6 404 aaPredicted RBP11.71□□□□□ -0.54
PCF11-201ENST00000298281 ELP5Q8TE02 316 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 KLRG1Q96E93 195 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 EFCAB11Q9BUY7 163 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 OPA3Q9H6K4 179 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 LGALS13Q9UHV8 139 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 ZNF705FA8MVS1 300 aaPredicted RBP11.71□□□□□ -0.54
PCF11-201ENST00000298281 C2orf74A8MZ97 194 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 hCG_2039718K7EN88 272 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 CRYZL1O95825 349 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 ZNF705DP0CH99 300 aaPredicted RBP11.71□□□□□ -0.54
PCF11-201ENST00000298281 ZNF705BP0CI00 300 aaPredicted RBP11.71□□□□□ -0.54
PCF11-201ENST00000298281 RHCEP18577 417 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 ETV5P41161 510 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 DGKGP49619 791 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 DRICH1Q6PGQ1 229 aaPredicted RBP11.71□□□□□ -0.54
PCF11-201ENST00000298281 KLHL36Q8N4N3 616 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 OR14K1Q8NGZ2 314 aa11.71□□□□□ -0.54
PCF11-201ENST00000298281 ZFP37Q9Y6Q3 630 aaPredicted RBP11.71□□□□□ -0.54
PCF11-201ENST00000298281 GGT3PA6NGU5 568 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 CAPN8A6NHC0 703 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 SH2D7A6NKC9 451 aaPredicted RBP11.7□□□□□ -0.54
PCF11-201ENST00000298281 CD3GP09693 182 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 USP43Q70EL4 1123 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 NLGN4YQ8NFZ3 816 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms