RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 C2CD5Q86YS7 1000 aa10.92□□□□□ -0.66
PHGDH-217ENST00000641455 ZNF219Q9P2Y4 722 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-217ENST00000641455 CCDC85CA6NKD9 419 aa10.91□□□□□ -0.66
PHGDH-217ENST00000641455 POTEIP0CG38 1075 aa10.91□□□□□ -0.66
PHGDH-217ENST00000641455 POTEJP0CG39 1038 aa10.91□□□□□ -0.66
PHGDH-217ENST00000641455 TM4SF1P30408 202 aa10.91□□□□□ -0.66
PHGDH-217ENST00000641455 VEGFBP49765 207 aa10.91□□□□□ -0.66
PHGDH-217ENST00000641455 MLLT1Q03111 559 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-217ENST00000641455 AFDNP55196 1824 aaKnown RBP10.91□□□□□ -0.66
PHGDH-217ENST00000641455 DLEC1Q9Y238 1755 aa10.9□□□□□ -0.66
PHGDH-217ENST00000641455 WASHC2AQ641Q2 1341 aa10.9□□□□□ -0.66
PHGDH-217ENST00000641455 H0YIN7 160 aa10.9□□□□□ -0.66
PHGDH-217ENST00000641455 ZNF530Q6P9A1 599 aaPredicted RBP10.9□□□□□ -0.66
PHGDH-217ENST00000641455 ZNF622Q969S3 477 aaKnown RBP eCLIP10.9□□□□□ -0.668e-16■■■□□ 16.5
PHGDH-217ENST00000641455 ANKRD26Q9UPS8 1709 aa10.89□□□□□ -0.67
PHGDH-217ENST00000641455 TMEM88BA6NKF7 163 aa10.89□□□□□ -0.67
PHGDH-217ENST00000641455 DDNO94850 711 aaPredicted RBP10.89□□□□□ -0.67
PHGDH-217ENST00000641455 SERPINB2P05120 415 aa10.89□□□□□ -0.67
PHGDH-217ENST00000641455 HSPA8P11142 646 aaKnown RBP10.89□□□□□ -0.67
PHGDH-217ENST00000641455 NFIXQ14938 502 aa10.89□□□□□ -0.67
PHGDH-217ENST00000641455 PLEKHO1Q53GL0 409 aaPredicted RBP10.89□□□□□ -0.67
PHGDH-217ENST00000641455 CFAP44Q96MT7 982 aa10.89□□□□□ -0.67
PHGDH-217ENST00000641455 WBP1LQ9NX94 342 aa10.89□□□□□ -0.67
PHGDH-217ENST00000641455 TJP1Q07157 1748 aa10.89□□□□□ -0.67
PHGDH-217ENST00000641455 DICER1Q9UPY3 1922 aaKnown RBP10.88□□□□□ -0.67
PHGDH-217ENST00000641455 C21orf2O43822 256 aa10.88□□□□□ -0.67
PHGDH-217ENST00000641455 MTHFSP49914 203 aa10.88□□□□□ -0.67
PHGDH-217ENST00000641455 C1orf141Q5JVX7 400 aa10.88□□□□□ -0.67
PHGDH-217ENST00000641455 LDHDQ86WU2 507 aa10.88□□□□□ -0.67
PHGDH-217ENST00000641455 IQCA1LA6NCM1 817 aa10.87□□□□□ -0.67
PHGDH-217ENST00000641455 EIF4A2Q14240 407 aaKnown RBP10.87□□□□□ -0.67
PHGDH-217ENST00000641455 EAPPQ56P03 285 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-217ENST00000641455 INTS5Q6P9B9 1019 aaKnown RBP10.87□□□□□ -0.67
PHGDH-217ENST00000641455 BICDL1Q6ZP65 573 aa10.87□□□□□ -0.67
PHGDH-217ENST00000641455 DNAJC10Q8IXB1 793 aa10.87□□□□□ -0.67
PHGDH-217ENST00000641455 NFATC2IPQ8NCF5 419 aa10.87□□□□□ -0.67
PHGDH-217ENST00000641455 TAOK3Q9H2K8 898 aa10.87□□□□□ -0.67
PHGDH-217ENST00000641455 CLEC11AQ9Y240 323 aa10.87□□□□□ -0.67
PHGDH-217ENST00000641455 CARMIL3Q8ND23 1372 aa10.87□□□□□ -0.67
PHGDH-217ENST00000641455 SOS1Q07889 1333 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-217ENST00000641455 PASKQ96RG2 1323 aa10.86□□□□□ -0.67
PHGDH-217ENST00000641455 VIRMAQ69YN4 1812 aaKnown RBP10.86□□□□□ -0.67
PHGDH-217ENST00000641455 ADAMTS7Q9UKP4 1686 aa10.86□□□□□ -0.67
PHGDH-217ENST00000641455 TNNT2P45379 298 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-217ENST00000641455 NARFQ9UHQ1 456 aa10.86□□□□□ -0.67
PHGDH-217ENST00000641455 COL15A1P39059 1388 aa10.86□□□□□ -0.67
PHGDH-217ENST00000641455 NRXN2Q9P2S2 1712 aa10.86□□□□□ -0.67
PHGDH-217ENST00000641455 MAP2K1Q02750 393 aaPredicted RBP10.85□□□□□ -0.67
PHGDH-217ENST00000641455 DEFB115Q30KQ5 88 aa10.85□□□□□ -0.67
PHGDH-217ENST00000641455 AMOTQ4VCS5 1084 aa10.85□□□□□ -0.67
PHGDH-217ENST00000641455 CDCA8Q53HL2 280 aa10.85□□□□□ -0.67
PHGDH-217ENST00000641455 PAXIP1Q6ZW49 1069 aaPredicted RBP10.85□□□□□ -0.67
PHGDH-217ENST00000641455 CARD14Q9BXL6 1004 aa10.85□□□□□ -0.67
PHGDH-217ENST00000641455 POLKQ9UBT6 870 aa10.85□□□□□ -0.67
PHGDH-217ENST00000641455 ABT1Q9ULW3 272 aaKnown RBP10.85□□□□□ -0.67
PHGDH-217ENST00000641455 FER1L6Q2WGJ9 1857 aa10.85□□□□□ -0.67
PHGDH-217ENST00000641455 NPHP1O15259 732 aa10.84□□□□□ -0.67
PHGDH-217ENST00000641455 BEGAINQ9BUH8 593 aa10.84□□□□□ -0.67
PHGDH-217ENST00000641455 TAF1DQ9H5J8 278 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-217ENST00000641455 CACNA1SQ13698 1873 aa10.83□□□□□ -0.68
PHGDH-217ENST00000641455 PDE6BP35913 854 aa10.83□□□□□ -0.68
PHGDH-217ENST00000641455 GRM1Q13255 1194 aa10.83□□□□□ -0.68
PHGDH-217ENST00000641455 CCDC24Q8N4L8 307 aa10.83□□□□□ -0.68
PHGDH-217ENST00000641455 BCL2L12Q9HB09 334 aa10.83□□□□□ -0.68
PHGDH-217ENST00000641455 ZBTB1Q9Y2K1 713 aa10.83□□□□□ -0.68
PHGDH-217ENST00000641455 SCN4AP35499 1836 aa10.83□□□□□ -0.68
PHGDH-217ENST00000641455 WDR33Q9C0J8 1336 aaKnown RBP10.83□□□□□ -0.68
PHGDH-217ENST00000641455 COL11A2P13942 1736 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-217ENST00000641455 RASSF10A6NK89 507 aa10.82□□□□□ -0.68
PHGDH-217ENST00000641455 ITGBL1O95965 494 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-217ENST00000641455 PDZRN3Q9UPQ7 1066 aa10.82□□□□□ -0.68
PHGDH-217ENST00000641455 ANKRD31Q8N7Z5 1873 aa10.82□□□□□ -0.68
PHGDH-217ENST00000641455 LTBP3Q9NS15 1303 aa10.82□□□□□ -0.68
PHGDH-217ENST00000641455 CYP19A1P11511 503 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-217ENST00000641455 CANXP27824 592 aaKnown RBP10.81□□□□□ -0.68
PHGDH-217ENST00000641455 RGS19P49795 217 aa10.81□□□□□ -0.68
PHGDH-217ENST00000641455 MAP1SQ66K74 1059 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-217ENST00000641455 HACL1Q9UJ83 578 aa10.81□□□□□ -0.68
PHGDH-217ENST00000641455 EPHX2P34913 555 aa10.8□□□□□ -0.68
PHGDH-217ENST00000641455 SLC39A6Q13433 755 aa10.8□□□□□ -0.68
PHGDH-217ENST00000641455 SOGA3Q5TF21 947 aa10.8□□□□□ -0.68
PHGDH-217ENST00000641455 AEBP1Q8IUX7 1158 aa10.8□□□□□ -0.68
PHGDH-217ENST00000641455 CNTROBQ8N137 903 aa10.8□□□□□ -0.68
PHGDH-217ENST00000641455 CNKSR1Q969H4 720 aa10.8□□□□□ -0.68
PHGDH-217ENST00000641455 L3MBTL3Q96JM7 780 aaPredicted RBP10.8□□□□□ -0.68
PHGDH-217ENST00000641455 BRIP1Q9BX63 1249 aa10.8□□□□□ -0.68
PHGDH-217ENST00000641455 TSKSQ9UJT2 592 aa10.8□□□□□ -0.68
PHGDH-217ENST00000641455 ZNF330Q9Y3S2 320 aaPredicted RBP10.8□□□□□ -0.68
PHGDH-217ENST00000641455 SCN11AQ9UI33 1791 aa10.8□□□□□ -0.68
PHGDH-217ENST00000641455 SLX4Q8IY92 1834 aa10.79□□□□□ -0.68
PHGDH-217ENST00000641455 TBC1D9BQ66K14 1250 aa10.79□□□□□ -0.68
PHGDH-217ENST00000641455 PRR5LQ6MZQ0 368 aa10.79□□□□□ -0.68
PHGDH-217ENST00000641455 PRPF40BQ6NWY9 871 aaKnown RBP10.79□□□□□ -0.68
PHGDH-217ENST00000641455 ZNF541Q9H0D2 1346 aa10.79□□□□□ -0.68
PHGDH-217ENST00000641455 A0A087WZG4 1122 aa10.78□□□□□ -0.68
PHGDH-217ENST00000641455 ECE1P42892 770 aa10.78□□□□□ -0.68
PHGDH-217ENST00000641455 PNMA8AQ86V59 439 aaPredicted RBP10.78□□□□□ -0.68
PHGDH-217ENST00000641455 CAPNS2Q96L46 248 aa10.78□□□□□ -0.68
PHGDH-217ENST00000641455 POLR3GLQ9BT43 218 aa10.78□□□□□ -0.68
PHGDH-217ENST00000641455 SLC52A2Q9HAB3 445 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms