RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 POLR3GLQ9BT43 218 aa18.88■□□□□ 0.61
HLA-C-210ENST00000640219 PCDH10Q9P2E7 1040 aa18.88■□□□□ 0.61
HLA-C-210ENST00000640219 CNTNAP1P78357 1384 aa18.88■□□□□ 0.61
HLA-C-210ENST00000640219 NFKBIEO00221 500 aa18.87■□□□□ 0.61
HLA-C-210ENST00000640219 ZPR1O75312 459 aa18.87■□□□□ 0.61
HLA-C-210ENST00000640219 USPL1Q5W0Q7 1092 aa18.87■□□□□ 0.61
HLA-C-210ENST00000640219 INTS5Q6P9B9 1019 aaKnown RBP18.85■□□□□ 0.61
HLA-C-210ENST00000640219 CARD14Q9BXL6 1004 aa18.85■□□□□ 0.61
HLA-C-210ENST00000640219 CCDC88AQ3V6T2 1871 aa18.85■□□□□ 0.61
HLA-C-210ENST00000640219 ANKRD26Q9UPS8 1709 aa18.85■□□□□ 0.61
HLA-C-210ENST00000640219 LBX1P52954 281 aa18.84■□□□□ 0.61
HLA-C-210ENST00000640219 C2CD5Q86YS7 1000 aa18.84■□□□□ 0.61
HLA-C-210ENST00000640219 POTEIP0CG38 1075 aa18.83■□□□□ 0.6
HLA-C-210ENST00000640219 POTEJP0CG39 1038 aa18.83■□□□□ 0.6
HLA-C-210ENST00000640219 EIF4A2Q14240 407 aaKnown RBP18.83■□□□□ 0.6
HLA-C-210ENST00000640219 NFIXQ14938 502 aa18.83■□□□□ 0.6
HLA-C-210ENST00000640219 ERFEQ4G0M1 354 aa18.83■□□□□ 0.6
HLA-C-210ENST00000640219 PLEKHO1Q53GL0 409 aaPredicted RBP18.83■□□□□ 0.6
HLA-C-210ENST00000640219 ZNF530Q6P9A1 599 aaPredicted RBP18.83■□□□□ 0.6
HLA-C-210ENST00000640219 ABHD8Q96I13 439 aa18.83■□□□□ 0.6
HLA-C-210ENST00000640219 POLKQ9UBT6 870 aa18.83■□□□□ 0.6
HLA-C-210ENST00000640219 H0YIN7 160 aa18.82■□□□□ 0.6
HLA-C-210ENST00000640219 SERPINB2P05120 415 aa18.82■□□□□ 0.6
HLA-C-210ENST00000640219 VEGFBP49765 207 aa18.82■□□□□ 0.6
HLA-C-210ENST00000640219 MTHFSP49914 203 aa18.82■□□□□ 0.6
HLA-C-210ENST00000640219 NFATC2IPQ8NCF5 419 aa18.82■□□□□ 0.6
HLA-C-210ENST00000640219 EIF4G2P78344 907 aaKnown RBP eCLIP18.81■□□□□ 0.6
HLA-C-210ENST00000640219 WBP1LQ9NX94 342 aa18.81■□□□□ 0.6
HLA-C-210ENST00000640219 ADAMTS7Q9UKP4 1686 aa18.81■□□□□ 0.6
HLA-C-210ENST00000640219 DLEC1Q9Y238 1755 aa18.81■□□□□ 0.6
HLA-C-210ENST00000640219 TJP1Q07157 1748 aa18.8■□□□□ 0.6
HLA-C-210ENST00000640219 AFDNP55196 1824 aaKnown RBP18.8■□□□□ 0.6
HLA-C-210ENST00000640219 SOS1Q07889 1333 aaPredicted RBP18.79■□□□□ 0.6
HLA-C-210ENST00000640219 PASKQ96RG2 1323 aa18.79■□□□□ 0.6
HLA-C-210ENST00000640219 DDNO94850 711 aaPredicted RBP18.79■□□□□ 0.6
HLA-C-210ENST00000640219 AMOTQ4VCS5 1084 aa18.79■□□□□ 0.6
HLA-C-210ENST00000640219 CDCA8Q53HL2 280 aa18.79■□□□□ 0.6
HLA-C-210ENST00000640219 NARFQ9UHQ1 456 aa18.79■□□□□ 0.6
HLA-C-210ENST00000640219 NRXN2Q9P2S2 1712 aa18.78■□□□□ 0.6
HLA-C-210ENST00000640219 TMEM88BA6NKF7 163 aa18.78■□□□□ 0.6
HLA-C-210ENST00000640219 C21orf2O43822 256 aa18.78■□□□□ 0.6
HLA-C-210ENST00000640219 C1orf141Q5JVX7 400 aa18.78■□□□□ 0.6
HLA-C-210ENST00000640219 DNAJC10Q8IXB1 793 aa18.78■□□□□ 0.6
HLA-C-210ENST00000640219 ZNF219Q9P2Y4 722 aaPredicted RBP18.78■□□□□ 0.6
HLA-C-210ENST00000640219 HSPA8P11142 646 aaKnown RBP18.77■□□□□ 0.6
HLA-C-210ENST00000640219 MLLT1Q03111 559 aaPredicted RBP18.77■□□□□ 0.6
HLA-C-210ENST00000640219 LDHDQ86WU2 507 aa18.77■□□□□ 0.6
HLA-C-210ENST00000640219 ZNF622Q969S3 477 aaKnown RBP eCLIP18.77■□□□□ 0.6
HLA-C-210ENST00000640219 CARMIL3Q8ND23 1372 aa18.76■□□□□ 0.59
HLA-C-210ENST00000640219 IQCA1LA6NCM1 817 aa18.75■□□□□ 0.59
HLA-C-210ENST00000640219 BCL2L12Q9HB09 334 aa18.75■□□□□ 0.59
HLA-C-210ENST00000640219 DICER1Q9UPY3 1922 aaKnown RBP18.74■□□□□ 0.59
HLA-C-210ENST00000640219 COL15A1P39059 1388 aa18.74■□□□□ 0.59
HLA-C-210ENST00000640219 CCDC85CA6NKD9 419 aa18.74■□□□□ 0.59
HLA-C-210ENST00000640219 CYP19A1P11511 503 aaPredicted RBP18.74■□□□□ 0.59
HLA-C-210ENST00000640219 TNNT2P45379 298 aaPredicted RBP18.74■□□□□ 0.59
HLA-C-210ENST00000640219 VIRMAQ69YN4 1812 aaKnown RBP18.73■□□□□ 0.59
HLA-C-210ENST00000640219 ITGBL1O95965 494 aaPredicted RBP18.73■□□□□ 0.59
HLA-C-210ENST00000640219 BICDL1Q6ZP65 573 aa18.73■□□□□ 0.59
HLA-C-210ENST00000640219 TAOK3Q9H2K8 898 aa18.73■□□□□ 0.59
HLA-C-210ENST00000640219 TAF1DQ9H5J8 278 aaPredicted RBP18.73■□□□□ 0.59
HLA-C-210ENST00000640219 PDZRN3Q9UPQ7 1066 aa18.73■□□□□ 0.59
HLA-C-210ENST00000640219 LTBP3Q9NS15 1303 aa18.73■□□□□ 0.59
HLA-C-210ENST00000640219 RGS19P49795 217 aa18.72■□□□□ 0.59
HLA-C-210ENST00000640219 DEFB115Q30KQ5 88 aa18.72■□□□□ 0.59
HLA-C-210ENST00000640219 FER1L6Q2WGJ9 1857 aa18.71■□□□□ 0.59
HLA-C-210ENST00000640219 PDE6BP35913 854 aa18.71■□□□□ 0.59
HLA-C-210ENST00000640219 MAP2K1Q02750 393 aaPredicted RBP18.71■□□□□ 0.59
HLA-C-210ENST00000640219 DIEXFQ68CQ4 756 aaKnown RBP18.71■□□□□ 0.59
HLA-C-210ENST00000640219 ZBTB1Q9Y2K1 713 aa18.71■□□□□ 0.59
HLA-C-210ENST00000640219 RASSF10A6NK89 507 aa18.7■□□□□ 0.58
HLA-C-210ENST00000640219 EAPPQ56P03 285 aaPredicted RBP18.7■□□□□ 0.58
HLA-C-210ENST00000640219 L3MBTL3Q96JM7 780 aaPredicted RBP18.7■□□□□ 0.58
HLA-C-210ENST00000640219 BRIP1Q9BX63 1249 aa18.7■□□□□ 0.58
HLA-C-210ENST00000640219 CLEC11AQ9Y240 323 aa18.7■□□□□ 0.58
HLA-C-210ENST00000640219 ZNF316A6NFI3 1004 aaPredicted RBP18.69■□□□□ 0.58
HLA-C-210ENST00000640219 WDR33Q9C0J8 1336 aaKnown RBP18.69■□□□□ 0.58
HLA-C-210ENST00000640219 AEBP1Q8IUX7 1158 aa18.68■□□□□ 0.58
HLA-C-210ENST00000640219 SLC39A6Q13433 755 aa18.67■□□□□ 0.58
HLA-C-210ENST00000640219 CCDC24Q8N4L8 307 aa18.67■□□□□ 0.58
HLA-C-210ENST00000640219 SLC52A2Q9HAB3 445 aa18.67■□□□□ 0.58
HLA-C-210ENST00000640219 SCN4AP35499 1836 aa18.67■□□□□ 0.58
HLA-C-210ENST00000640219 CANXP27824 592 aaKnown RBP18.66■□□□□ 0.58
HLA-C-210ENST00000640219 SOGA3Q5TF21 947 aa18.66■□□□□ 0.58
HLA-C-210ENST00000640219 TBC1D9BQ66K14 1250 aa18.66■□□□□ 0.58
HLA-C-210ENST00000640219 KIF7Q2M1P5 1343 aa18.66■□□□□ 0.58
HLA-C-210ENST00000640219 ANKRD31Q8N7Z5 1873 aa18.65■□□□□ 0.58
HLA-C-210ENST00000640219 PRR5LQ6MZQ0 368 aa18.65■□□□□ 0.58
HLA-C-210ENST00000640219 CNKSR1Q969H4 720 aa18.65■□□□□ 0.58
HLA-C-210ENST00000640219 PANK3Q9H999 370 aa18.65■□□□□ 0.58
HLA-C-210ENST00000640219 HACL1Q9UJ83 578 aa18.65■□□□□ 0.58
HLA-C-210ENST00000640219 ABT1Q9ULW3 272 aaKnown RBP18.65■□□□□ 0.58
HLA-C-210ENST00000640219 SCN11AQ9UI33 1791 aa18.64■□□□□ 0.57
HLA-C-210ENST00000640219 PRPF40BQ6NWY9 871 aaKnown RBP18.64■□□□□ 0.57
HLA-C-210ENST00000640219 CNTROBQ8N137 903 aa18.64■□□□□ 0.57
HLA-C-210ENST00000640219 COL11A2P13942 1736 aaPredicted RBP18.63■□□□□ 0.57
HLA-C-210ENST00000640219 A0A087WZG4 1122 aa18.63■□□□□ 0.57
HLA-C-210ENST00000640219 EPHX2P34913 555 aa18.63■□□□□ 0.57
HLA-C-210ENST00000640219 AKAP4Q5JQC9 854 aa18.63■□□□□ 0.57
HLA-C-210ENST00000640219 MAP1SQ66K74 1059 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms