RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 RTCBQ9Y3I0 505 aaKnown RBP11.88□□□□□ -0.51
KCNMA1-228ENST00000638223 ZNF790Q6PG37 636 aa11.88□□□□□ -0.51
KCNMA1-228ENST00000638223 GNPATO15228 680 aa11.87□□□□□ -0.51
KCNMA1-228ENST00000638223 PHAXQ9H814 394 aaKnown RBP11.87□□□□□ -0.51
KCNMA1-228ENST00000638223 SNRKQ9NRH2 765 aa11.87□□□□□ -0.51
KCNMA1-228ENST00000638223 SBNO2Q9Y2G9 1366 aa11.87□□□□□ -0.51
KCNMA1-228ENST00000638223 HIP1O00291 1037 aa11.87□□□□□ -0.51
KCNMA1-228ENST00000638223 CWF19L2Q2TBE0 894 aaKnown RBP11.87□□□□□ -0.51
KCNMA1-228ENST00000638223 DDX46Q7L014 1031 aaKnown RBP11.87□□□□□ -0.51
KCNMA1-228ENST00000638223 FAM182BQ5T319 152 aa11.87□□□□□ -0.51
KCNMA1-228ENST00000638223 CDCA7Q9BWT1 371 aaPredicted RBP11.87□□□□□ -0.51
KCNMA1-228ENST00000638223 ZMYM4Q5VZL5 1548 aa11.87□□□□□ -0.51
KCNMA1-228ENST00000638223 CAVIN4Q5BKX8 364 aa11.87□□□□□ -0.51
KCNMA1-228ENST00000638223 KSR2Q6VAB6 950 aa11.87□□□□□ -0.51
KCNMA1-228ENST00000638223 BRINP3Q76B58 766 aa11.87□□□□□ -0.51
KCNMA1-228ENST00000638223 CCNL1Q9UK58 526 aaPredicted RBP11.87□□□□□ -0.51
KCNMA1-228ENST00000638223 A1BGP04217 495 aa11.86□□□□□ -0.51
KCNMA1-228ENST00000638223 LMBR1LQ6UX01 489 aa11.86□□□□□ -0.51
KCNMA1-228ENST00000638223 SMC3Q9UQE7 1217 aa11.86□□□□□ -0.51
KCNMA1-228ENST00000638223 MX1P20591 662 aa11.86□□□□□ -0.51
KCNMA1-228ENST00000638223 AKAP2Q9Y2D5 859 aa11.86□□□□□ -0.51
KCNMA1-228ENST00000638223 NPC1L1Q9UHC9 1359 aa11.86□□□□□ -0.51
KCNMA1-228ENST00000638223 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.86□□□□□ -0.51
KCNMA1-228ENST00000638223 DNAJC10Q8IXB1 793 aa11.85□□□□□ -0.51
KCNMA1-228ENST00000638223 NACAP1Q9BZK3 213 aa11.85□□□□□ -0.51
KCNMA1-228ENST00000638223 ZNF496Q96IT1 587 aaPredicted RBP11.85□□□□□ -0.51
KCNMA1-228ENST00000638223 CDC5LQ99459 802 aaKnown RBP11.85□□□□□ -0.51
KCNMA1-228ENST00000638223 MROH1Q8NDA8 1641 aa11.85□□□□□ -0.51
KCNMA1-228ENST00000638223 TSHZ3Q63HK5 1081 aa11.85□□□□□ -0.51
KCNMA1-228ENST00000638223 ARHGEF25Q86VW2 580 aa11.85□□□□□ -0.51
KCNMA1-228ENST00000638223 MRPL50Q8N5N7 158 aaKnown RBP11.85□□□□□ -0.51
KCNMA1-228ENST00000638223 GRM8O00222 908 aa11.85□□□□□ -0.51
KCNMA1-228ENST00000638223 GLRX3O76003 335 aaKnown RBP11.85□□□□□ -0.51
KCNMA1-228ENST00000638223 TDO2P48775 406 aa11.85□□□□□ -0.51
KCNMA1-228ENST00000638223 SART3Q15020 963 aaKnown RBP11.85□□□□□ -0.51
KCNMA1-228ENST00000638223 G2E3Q7L622 706 aa11.85□□□□□ -0.51
KCNMA1-228ENST00000638223 CREBRFQ8IUR6 639 aa11.85□□□□□ -0.51
KCNMA1-228ENST00000638223 CCDC34Q96HJ3 373 aa11.85□□□□□ -0.51
KCNMA1-228ENST00000638223 NLRP3Q96P20 1036 aa11.84□□□□□ -0.51
KCNMA1-228ENST00000638223 MYOM2P54296 1465 aa11.84□□□□□ -0.51
KCNMA1-228ENST00000638223 PSMA5P28066 241 aa11.84□□□□□ -0.51
KCNMA1-228ENST00000638223 DNTTIP2Q5QJE6 756 aaKnown RBP11.84□□□□□ -0.51
KCNMA1-228ENST00000638223 DRC7Q8IY82 874 aa11.84□□□□□ -0.51
KCNMA1-228ENST00000638223 CWC22Q9HCG8 908 aaKnown RBP11.84□□□□□ -0.51
KCNMA1-228ENST00000638223 IQSEC3Q9UPP2 1182 aaPredicted RBP11.84□□□□□ -0.51
KCNMA1-228ENST00000638223 ABCA6Q8N139 1617 aa11.84□□□□□ -0.51
KCNMA1-228ENST00000638223 RAB11FIP3O75154 756 aa11.83□□□□□ -0.52
KCNMA1-228ENST00000638223 LINS1Q8NG48 757 aa11.83□□□□□ -0.52
KCNMA1-228ENST00000638223 QTRT2Q9H974 415 aaKnown RBP11.83□□□□□ -0.52
KCNMA1-228ENST00000638223 TRIM35Q9UPQ4 493 aa11.83□□□□□ -0.52
KCNMA1-228ENST00000638223 SLC3A2P08195 630 aaKnown RBP11.83□□□□□ -0.52
KCNMA1-228ENST00000638223 ATP2B1P20020 1258 aa11.83□□□□□ -0.52
KCNMA1-228ENST00000638223 ZSCAN25Q6NSZ9 544 aa11.83□□□□□ -0.52
KCNMA1-228ENST00000638223 SLC52A2Q9HAB3 445 aa11.83□□□□□ -0.52
KCNMA1-228ENST00000638223 DDX21Q9NR30 783 aaKnown RBP eCLIP11.83□□□□□ -0.52
KCNMA1-228ENST00000638223 SLC5A1P13866 664 aa11.83□□□□□ -0.52
KCNMA1-228ENST00000638223 AIDAQ96BJ3 306 aa11.83□□□□□ -0.52
KCNMA1-228ENST00000638223 ST5P78524 1137 aa11.82□□□□□ -0.52
KCNMA1-228ENST00000638223 CSPP1Q1MSJ5 1256 aa11.82□□□□□ -0.52
KCNMA1-228ENST00000638223 SYAP1Q96A49 352 aaPredicted RBP11.82□□□□□ -0.52
KCNMA1-228ENST00000638223 TET3O43151 1660 aa11.82□□□□□ -0.52
KCNMA1-228ENST00000638223 KCNQ3O43525 872 aa11.82□□□□□ -0.52
KCNMA1-228ENST00000638223 CCDC24Q8N4L8 307 aa11.82□□□□□ -0.52
KCNMA1-228ENST00000638223 ATP6V1DQ9Y5K8 247 aa11.82□□□□□ -0.52
KCNMA1-228ENST00000638223 APBA3O96018 575 aa11.82□□□□□ -0.52
KCNMA1-228ENST00000638223 RLBP1P12271 317 aa11.82□□□□□ -0.52
KCNMA1-228ENST00000638223 NBPF14Q5TI25 921 aa11.82□□□□□ -0.52
KCNMA1-228ENST00000638223 ARHGAP45Q92619 1136 aa11.82□□□□□ -0.52
KCNMA1-228ENST00000638223 PA2G4Q9UQ80 394 aaKnown RBP11.82□□□□□ -0.52
KCNMA1-228ENST00000638223 UNC13BO14795 1591 aa11.82□□□□□ -0.52
KCNMA1-228ENST00000638223 STK3Q13188 491 aa11.81□□□□□ -0.52
KCNMA1-228ENST00000638223 CCDC152Q4G0S7 254 aa11.81□□□□□ -0.52
KCNMA1-228ENST00000638223 TPTE2Q6XPS3 522 aa11.81□□□□□ -0.52
KCNMA1-228ENST00000638223 DZIP1Q86YF9 867 aaKnown RBP11.81□□□□□ -0.52
KCNMA1-228ENST00000638223 IL17REQ8NFR9 667 aa11.81□□□□□ -0.52
KCNMA1-228ENST00000638223 HELBQ8NG08 1087 aaPredicted RBP11.81□□□□□ -0.52
KCNMA1-228ENST00000638223 FAM89AQ96GI7 184 aa11.81□□□□□ -0.52
KCNMA1-228ENST00000638223 TCEAL9Q9UHQ7 104 aa11.81□□□□□ -0.52
KCNMA1-228ENST00000638223 PCDHB15Q9Y5E8 787 aa11.81□□□□□ -0.52
KCNMA1-228ENST00000638223 USP6P35125 1406 aa11.81□□□□□ -0.52
KCNMA1-228ENST00000638223 CHL1O00533 1208 aa11.81□□□□□ -0.52
KCNMA1-228ENST00000638223 TRAPPC3LQ5T215 181 aa11.81□□□□□ -0.52
KCNMA1-228ENST00000638223 DDX49Q9Y6V7 483 aaKnown RBP11.81□□□□□ -0.52
KCNMA1-228ENST00000638223 MINDY4BA8MYZ0 360 aa11.8□□□□□ -0.52
KCNMA1-228ENST00000638223 SAFBQ15424 915 aaKnown RBP eCLIP11.8□□□□□ -0.52
KCNMA1-228ENST00000638223 ANKRD18AQ8IVF6 992 aa11.8□□□□□ -0.52
KCNMA1-228ENST00000638223 UTP14AQ9BVJ6 771 aaKnown RBP11.8□□□□□ -0.52
KCNMA1-228ENST00000638223 TMOD2Q9NZR1 351 aa11.8□□□□□ -0.52
KCNMA1-228ENST00000638223 REREQ9P2R6 1566 aa11.8□□□□□ -0.52
KCNMA1-228ENST00000638223 GOLGA6L6A8MZA4 724 aa11.8□□□□□ -0.52
KCNMA1-228ENST00000638223 NRDCO43847 1150 aa11.8□□□□□ -0.52
KCNMA1-228ENST00000638223 ALDH1L1O75891 902 aa11.8□□□□□ -0.52
KCNMA1-228ENST00000638223 FAM135BQ49AJ0 1406 aa11.8□□□□□ -0.52
KCNMA1-228ENST00000638223 INSRP06213 1382 aa11.8□□□□□ -0.52
KCNMA1-228ENST00000638223 GOLIM4O00461 696 aa11.8□□□□□ -0.52
KCNMA1-228ENST00000638223 PHKG2P15735 406 aa11.8□□□□□ -0.52
KCNMA1-228ENST00000638223 KIF1BO60333 1816 aa11.8□□□□□ -0.52
KCNMA1-228ENST00000638223 VWDEQ8N2E2 1590 aa11.8□□□□□ -0.52
KCNMA1-228ENST00000638223 IRS4O14654 1257 aaPredicted RBP11.79□□□□□ -0.52
KCNMA1-228ENST00000638223 IGHDP01880 384 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms