RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 MRFAP1Q9Y605 127 aa7.12□□□□□ -1.27
CHD2-221ENST00000635856 SPAG9O60271 1321 aaKnown RBP7.11□□□□□ -1.27
CHD2-221ENST00000635856 CFAP65Q6ZU64 1925 aaKnown RBP7.11□□□□□ -1.27
CHD2-221ENST00000635856 ANKRD36BQ8N2N9 1353 aa7.11□□□□□ -1.27
CHD2-221ENST00000635856 PTGS1P23219 599 aa7.11□□□□□ -1.27
CHD2-221ENST00000635856 CLCN6P51797 869 aa7.11□□□□□ -1.27
CHD2-221ENST00000635856 CEP57Q86XR8 500 aa7.11□□□□□ -1.27
CHD2-221ENST00000635856 DYDC1Q8WWB3 177 aa7.11□□□□□ -1.27
CHD2-221ENST00000635856 CFDP1Q9UEE9 299 aaPredicted RBP7.11□□□□□ -1.27
CHD2-221ENST00000635856 ADAM21Q9UKJ8 722 aa7.11□□□□□ -1.27
CHD2-221ENST00000635856 SNAPC4Q5SXM2 1469 aa7.11□□□□□ -1.27
CHD2-221ENST00000635856 ANKRD30AQ9BXX3 1397 aa7.11□□□□□ -1.27
CHD2-221ENST00000635856 TUBB4AP04350 444 aa7.11□□□□□ -1.27
CHD2-221ENST00000635856 MYBL2P10244 700 aa7.11□□□□□ -1.27
CHD2-221ENST00000635856 LIG3P49916 1009 aa7.11□□□□□ -1.27
CHD2-221ENST00000635856 ICA1Q05084 483 aa7.11□□□□□ -1.27
CHD2-221ENST00000635856 FAM114A1Q8IWE2 563 aa7.11□□□□□ -1.27
CHD2-221ENST00000635856 THOC1Q96FV9 657 aaKnown RBP7.11□□□□□ -1.27
CHD2-221ENST00000635856 RPS6KL1Q9Y6S9 549 aa7.11□□□□□ -1.27
CHD2-221ENST00000635856 LRPPRCP42704 1394 aaKnown RBP7.11□□□□□ -1.27
CHD2-221ENST00000635856 SGSM2O43147 1006 aa7.11□□□□□ -1.27
CHD2-221ENST00000635856 ENOX2Q16206 610 aaKnown RBP7.11□□□□□ -1.27
CHD2-221ENST00000635856 CCDC30Q5VVM6 783 aa7.11□□□□□ -1.27
CHD2-221ENST00000635856 GPT2Q8TD30 523 aa7.11□□□□□ -1.27
CHD2-221ENST00000635856 HNRNPH1P31943 449 aaKnown RBP7.1□□□□□ -1.27
CHD2-221ENST00000635856 MAGEA8P43361 318 aa7.1□□□□□ -1.27
CHD2-221ENST00000635856 RANBP1P43487 201 aa7.1□□□□□ -1.27
CHD2-221ENST00000635856 HSP90AB2PQ58FF8 381 aa7.1□□□□□ -1.27
CHD2-221ENST00000635856 MYLK4Q86YV6 388 aaPredicted RBP7.1□□□□□ -1.27
CHD2-221ENST00000635856 CEP112Q8N8E3 955 aa7.1□□□□□ -1.27
CHD2-221ENST00000635856 GAS2L2Q8NHY3 880 aa7.1□□□□□ -1.27
CHD2-221ENST00000635856 RUFY1Q96T51 708 aa7.1□□□□□ -1.27
CHD2-221ENST00000635856 SRRTQ9BXP5 876 aaKnown RBP7.1□□□□□ -1.27
CHD2-221ENST00000635856 MYOM3Q5VTT5 1437 aa7.1□□□□□ -1.27
CHD2-221ENST00000635856 C21orf2O43822 256 aa7.1□□□□□ -1.27
CHD2-221ENST00000635856 ERCC6LQ2NKX8 1250 aa7.1□□□□□ -1.27
CHD2-221ENST00000635856 IQCA1Q86XH1 822 aa7.1□□□□□ -1.27
CHD2-221ENST00000635856 RNF168Q8IYW5 571 aaPredicted RBP7.1□□□□□ -1.27
CHD2-221ENST00000635856 CCAR2Q8N163 923 aaKnown RBP7.1□□□□□ -1.27
CHD2-221ENST00000635856 L3MBTL2Q969R5 705 aa7.1□□□□□ -1.27
CHD2-221ENST00000635856 CCDC102AQ96A19 550 aa7.1□□□□□ -1.27
CHD2-221ENST00000635856 SLC4A1APQ9BWU0 796 aaKnown RBP7.1□□□□□ -1.27
CHD2-221ENST00000635856 KANK1Q14678 1352 aa7.1□□□□□ -1.27
CHD2-221ENST00000635856 AP1G2O75843 785 aa7.1□□□□□ -1.27
CHD2-221ENST00000635856 DDIT3P35638 169 aa7.1□□□□□ -1.27
CHD2-221ENST00000635856 NUB1Q9Y5A7 615 aa7.1□□□□□ -1.27
CHD2-221ENST00000635856 CPP00450 1065 aa7.09□□□□□ -1.27
CHD2-221ENST00000635856 LRRC23Q53EV4 343 aaPredicted RBP7.09□□□□□ -1.27
CHD2-221ENST00000635856 SPTY2D1Q68D10 685 aaPredicted RBP7.09□□□□□ -1.27
CHD2-221ENST00000635856 CCDC50Q8IVM0 306 aa7.09□□□□□ -1.27
CHD2-221ENST00000635856 CFAP53Q96M91 514 aa7.09□□□□□ -1.27
CHD2-221ENST00000635856 BAG1Q99933 345 aaPredicted RBP7.09□□□□□ -1.27
CHD2-221ENST00000635856 TRAK1Q9UPV9 953 aa7.09□□□□□ -1.27
CHD2-221ENST00000635856 PTPRCP08575 1304 aa7.09□□□□□ -1.27
CHD2-221ENST00000635856 GOLGA6L4A6NEF3 574 aa7.09□□□□□ -1.27
CHD2-221ENST00000635856 PAX3P23760 479 aa7.09□□□□□ -1.27
CHD2-221ENST00000635856 CYB5RLQ6IPT4 315 aa7.09□□□□□ -1.27
CHD2-221ENST00000635856 ATP6V1DQ9Y5K8 247 aa7.09□□□□□ -1.27
CHD2-221ENST00000635856 SYNJ2O15056 1496 aa7.09□□□□□ -1.27
CHD2-221ENST00000635856 KIF21BO75037 1637 aa7.09□□□□□ -1.27
CHD2-221ENST00000635856 PPFIA4O75335 1185 aa7.09□□□□□ -1.27
CHD2-221ENST00000635856 RPS6KA3P51812 740 aa7.09□□□□□ -1.27
CHD2-221ENST00000635856 SNW1Q13573 536 aaKnown RBP7.09□□□□□ -1.27
CHD2-221ENST00000635856 CCDC114Q96M63 670 aa7.09□□□□□ -1.27
CHD2-221ENST00000635856 ATG3Q9NT62 314 aa7.09□□□□□ -1.27
CHD2-221ENST00000635856 GOLGA6L9A6NEM1 432 aa7.09□□□□□ -1.28
CHD2-221ENST00000635856 PLA2G4AP47712 749 aa7.09□□□□□ -1.28
CHD2-221ENST00000635856 CCDC181Q5TID7 509 aa7.09□□□□□ -1.28
CHD2-221ENST00000635856 ZSCAN16Q9H4T2 348 aaPredicted RBP7.09□□□□□ -1.28
CHD2-221ENST00000635856 GOLGA6L7A0A1B0GV03 622 aa7.08□□□□□ -1.28
CHD2-221ENST00000635856 SRGAP3O43295 1099 aa7.08□□□□□ -1.28
CHD2-221ENST00000635856 PANK1Q8TE04 598 aa7.08□□□□□ -1.28
CHD2-221ENST00000635856 ZNF396Q96N95 335 aaPredicted RBP7.08□□□□□ -1.28
CHD2-221ENST00000635856 FAM53CQ9NYF3 392 aa7.08□□□□□ -1.28
CHD2-221ENST00000635856 SWAP70Q9UH65 585 aa7.08□□□□□ -1.28
CHD2-221ENST00000635856 FHOD1Q9Y613 1164 aa7.08□□□□□ -1.28
CHD2-221ENST00000635856 NCOA3Q9Y6Q9 1424 aa7.08□□□□□ -1.28
CHD2-221ENST00000635856 PECAM1P16284 738 aaPredicted RBP7.08□□□□□ -1.28
CHD2-221ENST00000635856 TPP2P29144 1249 aaPredicted RBP7.08□□□□□ -1.28
CHD2-221ENST00000635856 INF2Q27J81 1249 aa7.08□□□□□ -1.28
CHD2-221ENST00000635856 CWC27Q6UX04 472 aaKnown RBP7.08□□□□□ -1.28
CHD2-221ENST00000635856 TCP11Q8WWU5 503 aa7.08□□□□□ -1.28
CHD2-221ENST00000635856 BIN2Q9UBW5 565 aaPredicted RBP7.08□□□□□ -1.28
CHD2-221ENST00000635856 FRMD3A2A2Y4 597 aa7.08□□□□□ -1.28
CHD2-221ENST00000635856 ECEL1O95672 775 aa7.08□□□□□ -1.28
CHD2-221ENST00000635856 DHX8Q14562 1220 aaKnown RBP7.08□□□□□ -1.28
CHD2-221ENST00000635856 RRP12Q5JTH9 1297 aaKnown RBP7.08□□□□□ -1.28
CHD2-221ENST00000635856 CEP85LQ5SZL2 805 aa7.08□□□□□ -1.28
CHD2-221ENST00000635856 GBP3Q9H0R5 595 aa7.08□□□□□ -1.28
CHD2-221ENST00000635856 KIF9Q9HAQ2 790 aa7.08□□□□□ -1.28
CHD2-221ENST00000635856 FRMD4BQ9Y2L6 1034 aa7.08□□□□□ -1.28
CHD2-221ENST00000635856 RUSC2Q8N2Y8 1516 aa7.07□□□□□ -1.28
CHD2-221ENST00000635856 ANKRD65E5RJM6 399 aa7.07□□□□□ -1.28
CHD2-221ENST00000635856 SCRN1Q12765 414 aa7.07□□□□□ -1.28
CHD2-221ENST00000635856 SEPT14Q6ZU15 432 aa7.07□□□□□ -1.28
CHD2-221ENST00000635856 ARMC9Q7Z3E5 817 aa7.07□□□□□ -1.28
CHD2-221ENST00000635856 FAM177A1Q8N128 213 aaPredicted RBP7.07□□□□□ -1.28
CHD2-221ENST00000635856 TRIM4Q9C037 500 aa7.07□□□□□ -1.28
CHD2-221ENST00000635856 NAT10Q9H0A0 1025 aaKnown RBP7.07□□□□□ -1.28
CHD2-221ENST00000635856 ZCCHC17Q9NP64 241 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms