RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 RHPN1Q8TCX5 695 aa23.29■■□□□ 1.32
PTBP1-220ENST00000627714 HSPA4P34932 840 aa23.28■■□□□ 1.32
PTBP1-220ENST00000627714 KCNH5Q8NCM2 988 aa23.28■■□□□ 1.32
PTBP1-220ENST00000627714 GPT2Q8TD30 523 aa23.28■■□□□ 1.32
PTBP1-220ENST00000627714 UNC5CLQ8IV45 518 aa23.28■■□□□ 1.32
PTBP1-220ENST00000627714 C14orf37Q86TY3 774 aa23.27■■□□□ 1.32
PTBP1-220ENST00000627714 USHBP1Q8N6Y0 703 aa23.27■■□□□ 1.32
PTBP1-220ENST00000627714 DNAAF4Q8WXU2 420 aa23.27■■□□□ 1.32
PTBP1-220ENST00000627714 IL1RAPL2Q9NP60 686 aa23.27■■□□□ 1.32
PTBP1-220ENST00000627714 HS1BP3Q53T59 392 aa23.27■■□□□ 1.31
PTBP1-220ENST00000627714 CHD2O14647 1828 aaKnown RBP23.26■■□□□ 1.31
PTBP1-220ENST00000627714 SRGAP3O43295 1099 aa23.26■■□□□ 1.31
PTBP1-220ENST00000627714 BEND3Q5T5X7 828 aa23.26■■□□□ 1.31
PTBP1-220ENST00000627714 PI4K2BQ8TCG2 481 aa23.26■■□□□ 1.31
PTBP1-220ENST00000627714 OVOS2A0A0G2JMS6 1433 aa23.26■■□□□ 1.31
PTBP1-220ENST00000627714 NCAPD2Q15021 1401 aa23.26■■□□□ 1.31
PTBP1-220ENST00000627714 AKAP4Q5JQC9 854 aa23.25■■□□□ 1.31
PTBP1-220ENST00000627714 CNTROBQ8N137 903 aa23.25■■□□□ 1.31
PTBP1-220ENST00000627714 NAP1L5Q96NT1 182 aaPredicted RBP23.25■■□□□ 1.31
PTBP1-220ENST00000627714 CRYBG1Q9Y4K1 1723 aa23.25■■□□□ 1.31
PTBP1-220ENST00000627714 RAD50Q92878 1312 aa23.25■■□□□ 1.31
PTBP1-220ENST00000627714 USP42Q9H9J4 1324 aaKnown RBP23.25■■□□□ 1.31
PTBP1-220ENST00000627714 EIF2S2P20042 333 aaKnown RBP23.24■■□□□ 1.31
PTBP1-220ENST00000627714 NBPF6Q5VWK0 638 aa23.24■■□□□ 1.31
PTBP1-220ENST00000627714 ZSCAN30Q86W11 494 aa23.24■■□□□ 1.31
PTBP1-220ENST00000627714 NUTM1Q86Y26 1132 aa23.24■■□□□ 1.31
PTBP1-220ENST00000627714 NBPF4Q96M43 638 aa23.24■■□□□ 1.31
PTBP1-220ENST00000627714 LRSAM1Q6UWE0 723 aa23.24■■□□□ 1.31
PTBP1-220ENST00000627714 CHPF2Q9P2E5 772 aa23.24■■□□□ 1.31
PTBP1-220ENST00000627714 HDAC5Q9UQL6 1122 aa23.24■■□□□ 1.31
PTBP1-220ENST00000627714 TTC41PQ6P2S7 1318 aa23.23■■□□□ 1.31
PTBP1-220ENST00000627714 SGSM2O43147 1006 aa23.23■■□□□ 1.31
PTBP1-220ENST00000627714 TEFQ10587 303 aa23.23■■□□□ 1.31
PTBP1-220ENST00000627714 PLEKHG5O94827 1062 aa23.23■■□□□ 1.31
PTBP1-220ENST00000627714 MTX1Q13505 466 aa23.23■■□□□ 1.31
PTBP1-220ENST00000627714 AMOTQ4VCS5 1084 aa23.23■■□□□ 1.31
PTBP1-220ENST00000627714 PLEKHO1Q53GL0 409 aaPredicted RBP23.23■■□□□ 1.31
PTBP1-220ENST00000627714 PI4KAP2A4QPH2 592 aa23.22■■□□□ 1.31
PTBP1-220ENST00000627714 PI4KAP1Q8N8J0 262 aa23.22■■□□□ 1.31
PTBP1-220ENST00000627714 WDR33Q9C0J8 1336 aaKnown RBP23.21■■□□□ 1.31
PTBP1-220ENST00000627714 NBPF7P0C2Y1 421 aaPredicted RBP23.21■■□□□ 1.31
PTBP1-220ENST00000627714 PRIM1P49642 420 aaKnown RBP23.21■■□□□ 1.31
PTBP1-220ENST00000627714 RBSNQ9H1K0 784 aa23.21■■□□□ 1.31
PTBP1-220ENST00000627714 LGR6Q9HBX8 967 aa23.21■■□□□ 1.31
PTBP1-220ENST00000627714 SYAP1Q96A49 352 aaPredicted RBP23.21■■□□□ 1.31
PTBP1-220ENST00000627714 DBF4Q9UBU7 674 aaPredicted RBP23.21■■□□□ 1.31
PTBP1-220ENST00000627714 BTBD11A6QL63 1104 aa23.2■■□□□ 1.3
PTBP1-220ENST00000627714 PDLIM2Q96JY6 352 aa23.2■■□□□ 1.3
PTBP1-220ENST00000627714 UPF3BQ9BZI7 483 aaKnown RBP23.2■■□□□ 1.3
PTBP1-220ENST00000627714 TMEM63CQ9P1W3 806 aa23.2■■□□□ 1.3
PTBP1-220ENST00000627714 ZNF530Q6P9A1 599 aaPredicted RBP23.2■■□□□ 1.3
PTBP1-220ENST00000627714 ADCY9O60503 1353 aa23.19■■□□□ 1.3
PTBP1-220ENST00000627714 ALDH1L1O75891 902 aa23.19■■□□□ 1.3
PTBP1-220ENST00000627714 GLRX3O76003 335 aaKnown RBP23.19■■□□□ 1.3
PTBP1-220ENST00000627714 RBM27Q9P2N5 1060 aaKnown RBP23.19■■□□□ 1.3
PTBP1-220ENST00000627714 KIAA1211Q6ZU35 1233 aa23.18■■□□□ 1.3
PTBP1-220ENST00000627714 IL25Q9H293 177 aa23.18■■□□□ 1.3
PTBP1-220ENST00000627714 PSME1Q06323 249 aa23.18■■□□□ 1.3
PTBP1-220ENST00000627714 MSNP26038 577 aaKnown RBP23.17■■□□□ 1.3
PTBP1-220ENST00000627714 ERC1Q8IUD2 1116 aa23.17■■□□□ 1.3
PTBP1-220ENST00000627714 LSG1Q9H089 658 aaKnown RBP23.17■■□□□ 1.3
PTBP1-220ENST00000627714 RUFY2Q8WXA3 655 aa23.17■■□□□ 1.3
PTBP1-220ENST00000627714 LMTK3Q96Q04 1460 aa23.17■■□□□ 1.3
PTBP1-220ENST00000627714 FOXD4L5Q5VV16 416 aaPredicted RBP23.16■■□□□ 1.3
PTBP1-220ENST00000627714 NOL8Q76FK4 1167 aaKnown RBP23.16■■□□□ 1.3
PTBP1-220ENST00000627714 ANKLE2Q86XL3 938 aa23.16■■□□□ 1.3
PTBP1-220ENST00000627714 FOXD4L4Q8WXT5 416 aaPredicted RBP23.16■■□□□ 1.3
PTBP1-220ENST00000627714 GPATCH3Q96I76 525 aa23.16■■□□□ 1.3
PTBP1-220ENST00000627714 SNX14Q9Y5W7 946 aa23.16■■□□□ 1.3
PTBP1-220ENST00000627714 RGPD2P0DJD1 1756 aa23.16■■□□□ 1.3
PTBP1-220ENST00000627714 SYCE3A1L190 88 aa23.16■■□□□ 1.3
PTBP1-220ENST00000627714 PHF14O94880 888 aa23.16■■□□□ 1.3
PTBP1-220ENST00000627714 C1orf141Q5JVX7 400 aa23.16■■□□□ 1.3
PTBP1-220ENST00000627714 CLASRPQ8N2M8 674 aaKnown RBP23.16■■□□□ 1.3
PTBP1-220ENST00000627714 OS9Q13438 667 aaPredicted RBP23.15■■□□□ 1.3
PTBP1-220ENST00000627714 TTC14Q96N46 770 aa23.15■■□□□ 1.3
PTBP1-220ENST00000627714 SLIT3O75094 1523 aa23.15■■□□□ 1.3
PTBP1-220ENST00000627714 RNMTO43148 476 aaKnown RBP23.14■■□□□ 1.3
PTBP1-220ENST00000627714 HEG1Q9ULI3 1381 aa23.14■■□□□ 1.29
PTBP1-220ENST00000627714 MAP4K4O95819 1239 aaPredicted RBP23.14■■□□□ 1.29
PTBP1-220ENST00000627714 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.14■■□□□ 1.29
PTBP1-220ENST00000627714 CAMTA1Q9Y6Y1 1673 aa23.14■■□□□ 1.29
PTBP1-220ENST00000627714 KCNQ3O43525 872 aa23.13■■□□□ 1.29
PTBP1-220ENST00000627714 NSFL1CQ9UNZ2 370 aaKnown RBP23.13■■□□□ 1.29
PTBP1-220ENST00000627714 ZNF142P52746 1687 aaPredicted RBP23.13■■□□□ 1.29
PTBP1-220ENST00000627714 ESCO1Q5FWF5 840 aa23.13■■□□□ 1.29
PTBP1-220ENST00000627714 KSR2Q6VAB6 950 aa23.13■■□□□ 1.29
PTBP1-220ENST00000627714 TMEM87AQ8NBN3 555 aa23.13■■□□□ 1.29
PTBP1-220ENST00000627714 DIAPH3Q9NSV4 1193 aa23.13■■□□□ 1.29
PTBP1-220ENST00000627714 LIMCH1Q9UPQ0 1083 aa23.13■■□□□ 1.29
PTBP1-220ENST00000627714 CHAMP1Q96JM3 812 aa23.12■■□□□ 1.29
PTBP1-220ENST00000627714 ECHDC1Q9NTX5 307 aa23.12■■□□□ 1.29
PTBP1-220ENST00000627714 C9orf78Q9NZ63 289 aaPredicted RBP23.12■■□□□ 1.29
PTBP1-220ENST00000627714 MPRIPQ6WCQ1 1025 aa23.12■■□□□ 1.29
PTBP1-220ENST00000627714 NOL7Q9UMY1 257 aaKnown RBP23.12■■□□□ 1.29
PTBP1-220ENST00000627714 GIGYF1O75420 1035 aaPredicted RBP23.11■■□□□ 1.29
PTBP1-220ENST00000627714 HYPKQ9NX55 129 aa23.11■■□□□ 1.29
PTBP1-220ENST00000627714 MAP3K2Q9Y2U5 619 aa23.11■■□□□ 1.29
PTBP1-220ENST00000627714 SETD1BQ9UPS6 1966 aaKnown RBP23.11■■□□□ 1.29
PTBP1-220ENST00000627714 CWC27Q6UX04 472 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms