RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 DNAAF4Q8WXU2 420 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 BBXQ8WY36 941 aaPredicted RBP6.94□□□□□ -1.3
RFX3-212ENST00000617270 CEP126Q9P2H0 1117 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 CUL5Q93034 780 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 BIN1O00499 593 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 TMC6Q7Z403 805 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 CHD1LQ86WJ1 897 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 POTEB2H3BUK9 544 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 MCM4P33991 863 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 SREK1Q8WXA9 508 aaKnown RBP6.94□□□□□ -1.3
RFX3-212ENST00000617270 CCDC194A0A1B0GVG4 234 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 PRC1O43663 620 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 CETN1Q12798 172 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 RPUSD2Q8IZ73 545 aaKnown RBP6.94□□□□□ -1.3
RFX3-212ENST00000617270 FERMT1Q9BQL6 677 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 MMRN2Q9H8L6 949 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 NDC80O14777 642 aa6.93□□□□□ -1.3
RFX3-212ENST00000617270 TPD52P55327 224 aaPredicted RBP6.93□□□□□ -1.3
RFX3-212ENST00000617270 GUCY1B3Q02153 619 aa6.93□□□□□ -1.3
RFX3-212ENST00000617270 DZIP1Q86YF9 867 aaKnown RBP6.93□□□□□ -1.3
RFX3-212ENST00000617270 FGFR1OPO95684 399 aaKnown RBP6.93□□□□□ -1.3
RFX3-212ENST00000617270 SYNCQ9H7C4 482 aa6.93□□□□□ -1.3
RFX3-212ENST00000617270 USP25Q9UHP3 1055 aa6.93□□□□□ -1.3
RFX3-212ENST00000617270 TERF1P54274 439 aa6.93□□□□□ -1.3
RFX3-212ENST00000617270 RGS22Q8NE09 1264 aa6.93□□□□□ -1.3
RFX3-212ENST00000617270 MKNK2Q9HBH9 465 aa6.93□□□□□ -1.3
RFX3-212ENST00000617270 ABCC8Q09428 1581 aa6.93□□□□□ -1.3
RFX3-212ENST00000617270 IDEP14735 1019 aa6.93□□□□□ -1.3
RFX3-212ENST00000617270 CCDC183Q5T5S1 534 aa6.93□□□□□ -1.3
RFX3-212ENST00000617270 RAB34Q9BZG1 259 aa6.93□□□□□ -1.3
RFX3-212ENST00000617270 ANAPC4Q9UJX5 808 aa6.93□□□□□ -1.3
RFX3-212ENST00000617270 RANBP6O60518 1105 aaKnown RBP6.93□□□□□ -1.3
RFX3-212ENST00000617270 CTCFLQ8NI51 663 aaPredicted RBP6.93□□□□□ -1.3
RFX3-212ENST00000617270 PHAXQ9H814 394 aaKnown RBP6.93□□□□□ -1.3
RFX3-212ENST00000617270 C8orf76Q96K31 380 aa6.93□□□□□ -1.3
RFX3-212ENST00000617270 CCDC12Q8WUD4 166 aaPredicted RBP6.92□□□□□ -1.3
RFX3-212ENST00000617270 RSPH14Q9UHP6 348 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 NOL3O60936 208 aaKnown RBP6.92□□□□□ -1.3
RFX3-212ENST00000617270 KIAA0753Q2KHM9 967 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 SULT6B1Q6IMI4 303 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 ZNF287Q9HBT7 754 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 CCDC7Q96M83 1385 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 HSF2BPO75031 334 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 SMC6Q96SB8 1091 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 ANKIB1Q9P2G1 1089 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 KIF20AO95235 890 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 GJC1P36383 396 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 METTL24Q5JXM2 366 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 CCDC63Q8NA47 563 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 CNNM3Q8NE01 707 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 SYCP3Q8IZU3 236 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 SAMM50Q9Y512 469 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 U3KPZ7 1027 aaPredicted RBP6.92□□□□□ -1.3
RFX3-212ENST00000617270 BICD1Q96G01 975 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 PANK2Q9BZ23 570 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 SCAND2PQ9GZW5 306 aaPredicted RBP6.92□□□□□ -1.3
RFX3-212ENST00000617270 SLC12A7Q9Y666 1083 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 CEP57Q86XR8 500 aa6.92□□□□□ -1.3
RFX3-212ENST00000617270 NSRP1Q9H0G5 558 aaKnown RBP6.92□□□□□ -1.3
RFX3-212ENST00000617270 WDHD1O75717 1129 aaPredicted RBP6.91□□□□□ -1.3
RFX3-212ENST00000617270 KIF4AO95239 1232 aa6.91□□□□□ -1.3
RFX3-212ENST00000617270 GTF2A1P52655 376 aaPredicted RBP6.91□□□□□ -1.3
RFX3-212ENST00000617270 NAPBQ9H115 298 aa6.91□□□□□ -1.3
RFX3-212ENST00000617270 RAD54L2Q9Y4B4 1467 aa6.91□□□□□ -1.3
RFX3-212ENST00000617270 GOLGA8BA8MQT2 603 aa6.91□□□□□ -1.3
RFX3-212ENST00000617270 SNW1Q13573 536 aaKnown RBP6.91□□□□□ -1.3
RFX3-212ENST00000617270 CIZ1Q9ULV3 898 aaPredicted RBP6.91□□□□□ -1.3
RFX3-212ENST00000617270 AKNAQ7Z591 1439 aa6.91□□□□□ -1.3
RFX3-212ENST00000617270 CEP83Q9Y592 693 aa6.91□□□□□ -1.3
RFX3-212ENST00000617270 EXOC6BQ9Y2D4 811 aa6.91□□□□□ -1.3
RFX3-212ENST00000617270 CCDC155Q8N6L0 562 aa6.91□□□□□ -1.3
RFX3-212ENST00000617270 ZBTB9Q96C00 473 aa6.91□□□□□ -1.3
RFX3-212ENST00000617270 MVPQ14764 893 aaKnown RBP6.91□□□□□ -1.3
RFX3-212ENST00000617270 SPG7Q9UQ90 795 aa6.91□□□□□ -1.3
RFX3-212ENST00000617270 SH3BP5O60239 455 aa6.91□□□□□ -1.3
RFX3-212ENST00000617270 PPP2R1AP30153 589 aa6.91□□□□□ -1.3
RFX3-212ENST00000617270 CKAP4Q07065 602 aaKnown RBP6.91□□□□□ -1.3
RFX3-212ENST00000617270 MAP7D1Q3KQU3 841 aa6.91□□□□□ -1.3
RFX3-212ENST00000617270 BRD4O60885 1362 aaPredicted RBP6.91□□□□□ -1.3
RFX3-212ENST00000617270 BTBD11A6QL63 1104 aa6.9□□□□□ -1.3
RFX3-212ENST00000617270 PPFIA3O75145 1194 aa6.9□□□□□ -1.3
RFX3-212ENST00000617270 FSIP1Q8NA03 581 aa6.9□□□□□ -1.3
RFX3-212ENST00000617270 MX1P20591 662 aa6.9□□□□□ -1.3
RFX3-212ENST00000617270 GNG11P61952 73 aa6.9□□□□□ -1.3
RFX3-212ENST00000617270 PDE3AQ14432 1141 aa6.9□□□□□ -1.3
RFX3-212ENST00000617270 SLC4A8Q2Y0W8 1093 aa6.9□□□□□ -1.3
RFX3-212ENST00000617270 ATRIPQ8WXE1 791 aa6.9□□□□□ -1.3
RFX3-212ENST00000617270 NLRP5P59047 1200 aa6.9□□□□□ -1.3
RFX3-212ENST00000617270 ZBTB16Q05516 673 aa6.9□□□□□ -1.3
RFX3-212ENST00000617270 KRT13P13646 458 aa6.9□□□□□ -1.3
RFX3-212ENST00000617270 ISM2Q6H9L7 571 aa6.9□□□□□ -1.3
RFX3-212ENST00000617270 SMC1BQ8NDV3 1235 aa6.9□□□□□ -1.3
RFX3-212ENST00000617270 BACH2Q9BYV9 841 aa6.9□□□□□ -1.3
RFX3-212ENST00000617270 EHMT1Q9H9B1 1298 aa6.9□□□□□ -1.3
RFX3-212ENST00000617270 CCDC196A0A1B0GTZ2 297 aa6.9□□□□□ -1.31
RFX3-212ENST00000617270 GOLGA8AA7E2F4 631 aa6.9□□□□□ -1.31
RFX3-212ENST00000617270 ATF7IPQ6VMQ6 1270 aa6.9□□□□□ -1.31
RFX3-212ENST00000617270 CCDC144CPQ8IYA2 1237 aa6.9□□□□□ -1.31
RFX3-212ENST00000617270 ZNF219Q9P2Y4 722 aaPredicted RBP6.9□□□□□ -1.31
RFX3-212ENST00000617270 AKR1B10O60218 316 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms