RNA–Protein interactions for RNA: ENST00000613941.4

SRSF3-204, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 4

Gene SRSF3, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-204ENST00000613941 CCDC85CA6NKD9 419 aa14.79□□□□□ -0.04
SRSF3-204ENST00000613941 HSPA8P11142 646 aaKnown RBP14.79□□□□□ -0.04
SRSF3-204ENST00000613941 CRKLP46109 303 aaKnown RBP14.79□□□□□ -0.04
SRSF3-204ENST00000613941 CASP8AP2Q9UKL3 1982 aa14.79□□□□□ -0.04
SRSF3-204ENST00000613941 SCN11AQ9UI33 1791 aa14.78□□□□□ -0.04
SRSF3-204ENST00000613941 ARFGEF2Q9Y6D5 1785 aa14.78□□□□□ -0.04
SRSF3-204ENST00000613941 KIF24Q5T7B8 1368 aa14.78□□□□□ -0.04
SRSF3-204ENST00000613941 PUS7Q96PZ0 661 aaKnown RBP14.78□□□□□ -0.04
SRSF3-204ENST00000613941 WBP1LQ9NX94 342 aa14.78□□□□□ -0.04
SRSF3-204ENST00000613941 SLX4Q8IY92 1834 aa14.78□□□□□ -0.04
SRSF3-204ENST00000613941 CARMIL3Q8ND23 1372 aa14.77□□□□□ -0.04
SRSF3-204ENST00000613941 TONSLQ96HA7 1378 aa14.77□□□□□ -0.04
SRSF3-204ENST00000613941 PPM1GO15355 546 aaPredicted RBP14.77□□□□□ -0.05
SRSF3-204ENST00000613941 DPY19L2Q6NUT2 758 aa14.77□□□□□ -0.05
SRSF3-204ENST00000613941 EYA1Q99502 592 aa14.77□□□□□ -0.05
SRSF3-204ENST00000613941 ADAMTSL1Q8N6G6 1762 aa14.76□□□□□ -0.05
SRSF3-204ENST00000613941 PASKQ96RG2 1323 aa14.76□□□□□ -0.05
SRSF3-204ENST00000613941 PTCD1O75127 700 aaKnown RBP14.76□□□□□ -0.05
SRSF3-204ENST00000613941 TM4SF1P30408 202 aa14.76□□□□□ -0.05
SRSF3-204ENST00000613941 TTLL6Q8N841 843 aa14.76□□□□□ -0.05
SRSF3-204ENST00000613941 THSD7BQ9C0I4 1608 aa14.76□□□□□ -0.05
SRSF3-204ENST00000613941 DDNO94850 711 aaPredicted RBP14.75□□□□□ -0.05
SRSF3-204ENST00000613941 ERFEQ4G0M1 354 aa14.75□□□□□ -0.05
SRSF3-204ENST00000613941 USPL1Q5W0Q7 1092 aa14.75□□□□□ -0.05
SRSF3-204ENST00000613941 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.75□□□□□ -0.053e-12■□□□□ 9.3
SRSF3-204ENST00000613941 ZNF219Q9P2Y4 722 aaPredicted RBP14.75□□□□□ -0.05
SRSF3-204ENST00000613941 TRPM7Q96QT4 1865 aa14.75□□□□□ -0.05
SRSF3-204ENST00000613941 TESK2Q96S53 571 aa14.74□□□□□ -0.05
SRSF3-204ENST00000613941 TMEM88BA6NKF7 163 aa14.73□□□□□ -0.05
SRSF3-204ENST00000613941 C2CD5Q86YS7 1000 aa14.73□□□□□ -0.05
SRSF3-204ENST00000613941 ERVV-2B6SEH9 535 aa14.72□□□□□ -0.05
SRSF3-204ENST00000613941 RGS19P49795 217 aa14.72□□□□□ -0.05
SRSF3-204ENST00000613941 NFIXQ14938 502 aa14.72□□□□□ -0.05
SRSF3-204ENST00000613941 CFAP44Q96MT7 982 aa14.72□□□□□ -0.05
SRSF3-204ENST00000613941 LTBP1Q14766 1721 aa14.72□□□□□ -0.05
SRSF3-204ENST00000613941 ZPR1O75312 459 aa14.71□□□□□ -0.05
SRSF3-204ENST00000613941 ST20-MTHFSA0A0A6YYL1 179 aa14.7□□□□□ -0.06
SRSF3-204ENST00000613941 C21orf2O43822 256 aa14.7□□□□□ -0.06
SRSF3-204ENST00000613941 CABP4P57796 275 aa14.7□□□□□ -0.06
SRSF3-204ENST00000613941 INTS5Q6P9B9 1019 aaKnown RBP14.7□□□□□ -0.06
SRSF3-204ENST00000613941 LDHDQ86WU2 507 aa14.7□□□□□ -0.06
SRSF3-204ENST00000613941 SCN7AQ01118 1682 aa14.7□□□□□ -0.06
SRSF3-204ENST00000613941 ITGBL1O95965 494 aaPredicted RBP14.69□□□□□ -0.06
SRSF3-204ENST00000613941 SERPINB2P05120 415 aa14.69□□□□□ -0.06
SRSF3-204ENST00000613941 EAPPQ56P03 285 aaPredicted RBP14.69□□□□□ -0.06
SRSF3-204ENST00000613941 WASHC2AQ641Q2 1341 aa14.68□□□□□ -0.06
SRSF3-204ENST00000613941 H0YIN7 160 aa14.68□□□□□ -0.06
SRSF3-204ENST00000613941 DEFB115Q30KQ5 88 aa14.68□□□□□ -0.06
SRSF3-204ENST00000613941 ZNF622Q969S3 477 aaKnown RBP eCLIP14.68□□□□□ -0.061e-24■□□□□ 9.7
SRSF3-204ENST00000613941 TAF1DQ9H5J8 278 aaPredicted RBP14.68□□□□□ -0.06
SRSF3-204ENST00000613941 TSKSQ9UJT2 592 aa14.68□□□□□ -0.06
SRSF3-204ENST00000613941 COL15A1P39059 1388 aa14.68□□□□□ -0.06
SRSF3-204ENST00000613941 SOS1Q07889 1333 aaPredicted RBP14.67□□□□□ -0.06
SRSF3-204ENST00000613941 WDR33Q9C0J8 1336 aaKnown RBP14.67□□□□□ -0.06
SRSF3-204ENST00000613941 RASSF10A6NK89 507 aa14.67□□□□□ -0.06
SRSF3-204ENST00000613941 MAP2K1Q02750 393 aaPredicted RBP14.66□□□□□ -0.06
SRSF3-204ENST00000613941 ZNF530Q6P9A1 599 aaPredicted RBP14.66□□□□□ -0.06
SRSF3-204ENST00000613941 BICDL1Q6ZP65 573 aa14.66□□□□□ -0.06
SRSF3-204ENST00000613941 DNAJC10Q8IXB1 793 aa14.66□□□□□ -0.06
SRSF3-204ENST00000613941 CCDC24Q8N4L8 307 aa14.66□□□□□ -0.06
SRSF3-204ENST00000613941 TAOK3Q9H2K8 898 aa14.66□□□□□ -0.06
SRSF3-204ENST00000613941 BCL2L12Q9HB09 334 aa14.66□□□□□ -0.06
SRSF3-204ENST00000613941 UBR2Q8IWV8 1755 aa14.65□□□□□ -0.06
SRSF3-204ENST00000613941 IQCA1LA6NCM1 817 aa14.65□□□□□ -0.06
SRSF3-204ENST00000613941 HSP90AB1P08238 724 aaKnown RBP14.65□□□□□ -0.06
SRSF3-204ENST00000613941 GRM1Q13255 1194 aa14.65□□□□□ -0.06
SRSF3-204ENST00000613941 EIF4A2Q14240 407 aaKnown RBP14.65□□□□□ -0.06
SRSF3-204ENST00000613941 NFATC2IPQ8NCF5 419 aa14.65□□□□□ -0.06
SRSF3-204ENST00000613941 NARFQ9UHQ1 456 aa14.65□□□□□ -0.06
SRSF3-204ENST00000613941 ABT1Q9ULW3 272 aaKnown RBP14.65□□□□□ -0.06
SRSF3-204ENST00000613941 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
SRSF3-204ENST00000613941 MAP1SQ66K74 1059 aaPredicted RBP14.63□□□□□ -0.07
SRSF3-204ENST00000613941 PAXIP1Q6ZW49 1069 aaPredicted RBP14.63□□□□□ -0.07
SRSF3-204ENST00000613941 CARD14Q9BXL6 1004 aa14.63□□□□□ -0.07
SRSF3-204ENST00000613941 ZBTB1Q9Y2K1 713 aa14.63□□□□□ -0.07
SRSF3-204ENST00000613941 ZNF541Q9H0D2 1346 aa14.63□□□□□ -0.07
SRSF3-204ENST00000613941 LTBP3Q9NS15 1303 aa14.63□□□□□ -0.07
SRSF3-204ENST00000613941 BCORQ6W2J9 1755 aa14.62□□□□□ -0.07
SRSF3-204ENST00000613941 MTHFSP49914 203 aa14.62□□□□□ -0.07
SRSF3-204ENST00000613941 L3MBTL3Q96JM7 780 aaPredicted RBP14.62□□□□□ -0.07
SRSF3-204ENST00000613941 MCOLN1Q9GZU1 580 aa14.62□□□□□ -0.07
SRSF3-204ENST00000613941 POLKQ9UBT6 870 aa14.62□□□□□ -0.07
SRSF3-204ENST00000613941 FMR1Q06787 632 aaKnown RBP eCLIP14.61□□□□□ -0.07
SRSF3-204ENST00000613941 PLEKHO1Q53GL0 409 aaPredicted RBP14.61□□□□□ -0.07
SRSF3-204ENST00000613941 RNF123Q5XPI4 1314 aa14.61□□□□□ -0.07
SRSF3-204ENST00000613941 CYP19A1P11511 503 aaPredicted RBP14.6□□□□□ -0.07
SRSF3-204ENST00000613941 EPHX2P34913 555 aa14.6□□□□□ -0.07
SRSF3-204ENST00000613941 CYP4F22Q6NT55 531 aa14.6□□□□□ -0.07
SRSF3-204ENST00000613941 CNTROBQ8N137 903 aa14.6□□□□□ -0.07
SRSF3-204ENST00000613941 CAPNS2Q96L46 248 aa14.6□□□□□ -0.07
SRSF3-204ENST00000613941 BEGAINQ9BUH8 593 aa14.6□□□□□ -0.07
SRSF3-204ENST00000613941 HACL1Q9UJ83 578 aa14.6□□□□□ -0.07
SRSF3-204ENST00000613941 TNNT2P45379 298 aaPredicted RBP14.59□□□□□ -0.07
SRSF3-204ENST00000613941 C1orf141Q5JVX7 400 aa14.59□□□□□ -0.07
SRSF3-204ENST00000613941 TBC1D9BQ66K14 1250 aa14.58□□□□□ -0.08
SRSF3-204ENST00000613941 PRR5LQ6MZQ0 368 aa14.58□□□□□ -0.08
SRSF3-204ENST00000613941 PRPF40BQ6NWY9 871 aaKnown RBP14.58□□□□□ -0.08
SRSF3-204ENST00000613941 AEBP1Q8IUX7 1158 aa14.58□□□□□ -0.08
SRSF3-204ENST00000613941 AOC2O75106 756 aa14.57□□□□□ -0.08
SRSF3-204ENST00000613941 CANXP27824 592 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms