RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 ZPR1O75312 459 aa14.36□□□□□ -0.11
SSX3-204ENST00000612497 CABP4P57796 275 aa14.36□□□□□ -0.11
SSX3-204ENST00000612497 MLLT1Q03111 559 aaPredicted RBP14.36□□□□□ -0.11
SSX3-204ENST00000612497 DLEC1Q9Y238 1755 aa14.35□□□□□ -0.11
SSX3-204ENST00000612497 NFKBIEO00221 500 aa14.35□□□□□ -0.11
SSX3-204ENST00000612497 HSP90AB1P08238 724 aaKnown RBP14.35□□□□□ -0.11
SSX3-204ENST00000612497 POTEIP0CG38 1075 aa14.35□□□□□ -0.11
SSX3-204ENST00000612497 POTEJP0CG39 1038 aa14.35□□□□□ -0.11
SSX3-204ENST00000612497 VEGFBP49765 207 aa14.35□□□□□ -0.11
SSX3-204ENST00000612497 DICER1Q9UPY3 1922 aaKnown RBP14.35□□□□□ -0.11
SSX3-204ENST00000612497 ERFEQ4G0M1 354 aa14.34□□□□□ -0.11
SSX3-204ENST00000612497 USPL1Q5W0Q7 1092 aa14.34□□□□□ -0.11
SSX3-204ENST00000612497 C2CD5Q86YS7 1000 aa14.34□□□□□ -0.11
SSX3-204ENST00000612497 WBP1LQ9NX94 342 aa14.34□□□□□ -0.11
SSX3-204ENST00000612497 WASHC2AQ641Q2 1341 aa14.34□□□□□ -0.11
SSX3-204ENST00000612497 VIRMAQ69YN4 1812 aaKnown RBP14.33□□□□□ -0.12
SSX3-204ENST00000612497 CCDC85CA6NKD9 419 aa14.32□□□□□ -0.12
SSX3-204ENST00000612497 H0YIN7 160 aa14.32□□□□□ -0.12
SSX3-204ENST00000612497 NFIXQ14938 502 aa14.32□□□□□ -0.12
SSX3-204ENST00000612497 INTS5Q6P9B9 1019 aaKnown RBP14.32□□□□□ -0.12
SSX3-204ENST00000612497 TMEM88BA6NKF7 163 aa14.31□□□□□ -0.12
SSX3-204ENST00000612497 DDNO94850 711 aaPredicted RBP14.31□□□□□ -0.12
SSX3-204ENST00000612497 SERPINB2P05120 415 aa14.31□□□□□ -0.12
SSX3-204ENST00000612497 HSPA8P11142 646 aaKnown RBP14.31□□□□□ -0.12
SSX3-204ENST00000612497 ZNF219Q9P2Y4 722 aaPredicted RBP14.31□□□□□ -0.12
SSX3-204ENST00000612497 ANKRD26Q9UPS8 1709 aa14.31□□□□□ -0.12
SSX3-204ENST00000612497 PASKQ96RG2 1323 aa14.31□□□□□ -0.12
SSX3-204ENST00000612497 ADAMTS7Q9UKP4 1686 aa14.3□□□□□ -0.12
SSX3-204ENST00000612497 TJP1Q07157 1748 aa14.3□□□□□ -0.12
SSX3-204ENST00000612497 PLEKHO1Q53GL0 409 aaPredicted RBP14.3□□□□□ -0.12
SSX3-204ENST00000612497 ZNF530Q6P9A1 599 aaPredicted RBP14.3□□□□□ -0.12
SSX3-204ENST00000612497 NRXN2Q9P2S2 1712 aa14.29□□□□□ -0.12
SSX3-204ENST00000612497 C21orf2O43822 256 aa14.29□□□□□ -0.12
SSX3-204ENST00000612497 MTHFSP49914 203 aa14.29□□□□□ -0.12
SSX3-204ENST00000612497 LDHDQ86WU2 507 aa14.29□□□□□ -0.12
SSX3-204ENST00000612497 NFATC2IPQ8NCF5 419 aa14.29□□□□□ -0.12
SSX3-204ENST00000612497 ZNF622Q969S3 477 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■■□□□ 13.4
SSX3-204ENST00000612497 FER1L6Q2WGJ9 1857 aa14.29□□□□□ -0.12
SSX3-204ENST00000612497 IQCA1LA6NCM1 817 aa14.28□□□□□ -0.12
SSX3-204ENST00000612497 EIF4A2Q14240 407 aaKnown RBP14.28□□□□□ -0.12
SSX3-204ENST00000612497 NARFQ9UHQ1 456 aa14.28□□□□□ -0.12
SSX3-204ENST00000612497 SOS1Q07889 1333 aaPredicted RBP14.27□□□□□ -0.12
SSX3-204ENST00000612497 RGS19P49795 217 aa14.27□□□□□ -0.13
SSX3-204ENST00000612497 MAP2K1Q02750 393 aaPredicted RBP14.27□□□□□ -0.13
SSX3-204ENST00000612497 DNAJC10Q8IXB1 793 aa14.27□□□□□ -0.13
SSX3-204ENST00000612497 CARD14Q9BXL6 1004 aa14.27□□□□□ -0.13
SSX3-204ENST00000612497 SCN4AP35499 1836 aa14.27□□□□□ -0.13
SSX3-204ENST00000612497 CARMIL3Q8ND23 1372 aa14.26□□□□□ -0.13
SSX3-204ENST00000612497 ITGBL1O95965 494 aaPredicted RBP14.26□□□□□ -0.13
SSX3-204ENST00000612497 DEFB115Q30KQ5 88 aa14.26□□□□□ -0.13
SSX3-204ENST00000612497 C1orf141Q5JVX7 400 aa14.26□□□□□ -0.13
SSX3-204ENST00000612497 TAOK3Q9H2K8 898 aa14.26□□□□□ -0.13
SSX3-204ENST00000612497 POLKQ9UBT6 870 aa14.26□□□□□ -0.13
SSX3-204ENST00000612497 CLEC11AQ9Y240 323 aa14.26□□□□□ -0.13
SSX3-204ENST00000612497 AMOTQ4VCS5 1084 aa14.25□□□□□ -0.13
SSX3-204ENST00000612497 EAPPQ56P03 285 aaPredicted RBP14.25□□□□□ -0.13
SSX3-204ENST00000612497 BICDL1Q6ZP65 573 aa14.25□□□□□ -0.13
SSX3-204ENST00000612497 TAF1DQ9H5J8 278 aaPredicted RBP14.25□□□□□ -0.13
SSX3-204ENST00000612497 WDR33Q9C0J8 1336 aaKnown RBP14.24□□□□□ -0.13
SSX3-204ENST00000612497 RASSF10A6NK89 507 aa14.24□□□□□ -0.13
SSX3-204ENST00000612497 CFAP44Q96MT7 982 aa14.24□□□□□ -0.13
SSX3-204ENST00000612497 BCL2L12Q9HB09 334 aa14.24□□□□□ -0.13
SSX3-204ENST00000612497 COL15A1P39059 1388 aa14.23□□□□□ -0.13
SSX3-204ENST00000612497 CACNA1SQ13698 1873 aa14.23□□□□□ -0.13
SSX3-204ENST00000612497 ANKRD31Q8N7Z5 1873 aa14.23□□□□□ -0.13
SSX3-204ENST00000612497 LTBP3Q9NS15 1303 aa14.23□□□□□ -0.13
SSX3-204ENST00000612497 CYP19A1P11511 503 aaPredicted RBP14.23□□□□□ -0.13
SSX3-204ENST00000612497 PDE6BP35913 854 aa14.23□□□□□ -0.13
SSX3-204ENST00000612497 TNNT2P45379 298 aaPredicted RBP14.23□□□□□ -0.13
SSX3-204ENST00000612497 CDCA8Q53HL2 280 aa14.23□□□□□ -0.13
SSX3-204ENST00000612497 BEGAINQ9BUH8 593 aa14.23□□□□□ -0.13
SSX3-204ENST00000612497 ABT1Q9ULW3 272 aaKnown RBP14.23□□□□□ -0.13
SSX3-204ENST00000612497 L3MBTL3Q96JM7 780 aaPredicted RBP14.22□□□□□ -0.13
SSX3-204ENST00000612497 PDZRN3Q9UPQ7 1066 aa14.22□□□□□ -0.13
SSX3-204ENST00000612497 SLX4Q8IY92 1834 aa14.21□□□□□ -0.13
SSX3-204ENST00000612497 CCDC24Q8N4L8 307 aa14.21□□□□□ -0.13
SSX3-204ENST00000612497 BRIP1Q9BX63 1249 aa14.21□□□□□ -0.13
SSX3-204ENST00000612497 ZBTB1Q9Y2K1 713 aa14.21□□□□□ -0.13
SSX3-204ENST00000612497 PDE4DIPQ5VU43 2346 aa14.21□□□□□ -0.13
SSX3-204ENST00000612497 SCN11AQ9UI33 1791 aa14.21□□□□□ -0.13
SSX3-204ENST00000612497 TNRC18O15417 2968 aaPredicted RBP14.21□□□□□ -0.14
SSX3-204ENST00000612497 PAXIP1Q6ZW49 1069 aaPredicted RBP14.2□□□□□ -0.14
SSX3-204ENST00000612497 CNTROBQ8N137 903 aa14.2□□□□□ -0.14
SSX3-204ENST00000612497 HACL1Q9UJ83 578 aa14.2□□□□□ -0.14
SSX3-204ENST00000612497 COL11A2P13942 1736 aaPredicted RBP14.2□□□□□ -0.14
SSX3-204ENST00000612497 CANXP27824 592 aaKnown RBP14.19□□□□□ -0.14
SSX3-204ENST00000612497 GRM1Q13255 1194 aa14.19□□□□□ -0.14
SSX3-204ENST00000612497 MAP1SQ66K74 1059 aaPredicted RBP14.19□□□□□ -0.14
SSX3-204ENST00000612497 CNKSR1Q969H4 720 aa14.19□□□□□ -0.14
SSX3-204ENST00000612497 EPHX2P34913 555 aa14.18□□□□□ -0.14
SSX3-204ENST00000612497 SOGA3Q5TF21 947 aa14.18□□□□□ -0.14
SSX3-204ENST00000612497 TBC1D9BQ66K14 1250 aa14.18□□□□□ -0.14
SSX3-204ENST00000612497 PRPF40BQ6NWY9 871 aaKnown RBP14.18□□□□□ -0.14
SSX3-204ENST00000612497 PNMA8AQ86V59 439 aaPredicted RBP14.18□□□□□ -0.14
SSX3-204ENST00000612497 AEBP1Q8IUX7 1158 aa14.18□□□□□ -0.14
SSX3-204ENST00000612497 NPHP1O15259 732 aa14.17□□□□□ -0.14
SSX3-204ENST00000612497 ECE1P42892 770 aa14.17□□□□□ -0.14
SSX3-204ENST00000612497 SLC39A6Q13433 755 aa14.17□□□□□ -0.14
SSX3-204ENST00000612497 PRR5LQ6MZQ0 368 aa14.17□□□□□ -0.14
SSX3-204ENST00000612497 CAPNS2Q96L46 248 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms