RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 PIGBQ92521 554 aa22.84■■□□□ 1.25
SNAPC3-207ENST00000610884 ACSBG1Q96GR2 724 aa22.84■■□□□ 1.25
SNAPC3-207ENST00000610884 ZNF330Q9Y3S2 320 aaPredicted RBP22.84■■□□□ 1.25
SNAPC3-207ENST00000610884 ADCY9O60503 1353 aa22.84■■□□□ 1.25
SNAPC3-207ENST00000610884 C8orf34Q49A92 452 aa22.84■■□□□ 1.25
SNAPC3-207ENST00000610884 COPS6Q7L5N1 327 aa22.84■■□□□ 1.25
SNAPC3-207ENST00000610884 EXOC5O00471 708 aa22.83■■□□□ 1.25
SNAPC3-207ENST00000610884 A1BGP04217 495 aa22.83■■□□□ 1.25
SNAPC3-207ENST00000610884 FMNL2Q96PY5 1086 aa22.83■■□□□ 1.25
SNAPC3-207ENST00000610884 LRRFIP2Q9Y608 721 aaKnown RBP22.83■■□□□ 1.25
SNAPC3-207ENST00000610884 XAGE3Q8WTP9 111 aa22.83■■□□□ 1.24
SNAPC3-207ENST00000610884 DNAAF4Q8WXU2 420 aa22.83■■□□□ 1.24
SNAPC3-207ENST00000610884 PNMA6EA0A0J9YXQ4 647 aa22.82■■□□□ 1.24
SNAPC3-207ENST00000610884 SEC24BO95487 1268 aa22.82■■□□□ 1.24
SNAPC3-207ENST00000610884 SNRPA1P09661 255 aaKnown RBP22.82■■□□□ 1.24
SNAPC3-207ENST00000610884 CERKQ8TCT0 537 aa22.82■■□□□ 1.24
SNAPC3-207ENST00000610884 HOXB7P09629 217 aa22.82■■□□□ 1.24
SNAPC3-207ENST00000610884 FAM182BQ5T319 152 aa22.82■■□□□ 1.24
SNAPC3-207ENST00000610884 TMOD3Q9NYL9 352 aa22.82■■□□□ 1.24
SNAPC3-207ENST00000610884 RBM42Q9BTD8 480 aaKnown RBP22.81■■□□□ 1.24
SNAPC3-207ENST00000610884 ADAMTS7Q9UKP4 1686 aa22.81■■□□□ 1.24
SNAPC3-207ENST00000610884 FAM98CQ17RN3 349 aaKnown RBP22.81■■□□□ 1.24
SNAPC3-207ENST00000610884 C5P01031 1676 aa22.8■■□□□ 1.24
SNAPC3-207ENST00000610884 NKX1-1Q15270 411 aaPredicted RBP22.8■■□□□ 1.24
SNAPC3-207ENST00000610884 BEND3Q5T5X7 828 aa22.8■■□□□ 1.24
SNAPC3-207ENST00000610884 SRCIN1Q9C0H9 1055 aa22.8■■□□□ 1.24
SNAPC3-207ENST00000610884 HSPA1LP34931 641 aa22.8■■□□□ 1.24
SNAPC3-207ENST00000610884 NUCB1Q02818 461 aa22.8■■□□□ 1.24
SNAPC3-207ENST00000610884 CHD1LQ86WJ1 897 aa22.8■■□□□ 1.24
SNAPC3-207ENST00000610884 DDX21Q9NR30 783 aaKnown RBP eCLIP22.8■■□□□ 1.24
SNAPC3-207ENST00000610884 EXOC6BQ9Y2D4 811 aa22.8■■□□□ 1.24
SNAPC3-207ENST00000610884 SPATA31A1Q5TZJ5 1347 aa22.79■■□□□ 1.24
SNAPC3-207ENST00000610884 ATP10DQ9P241 1426 aa22.79■■□□□ 1.24
SNAPC3-207ENST00000610884 PARP4Q9UKK3 1724 aaKnown RBP22.79■■□□□ 1.24
SNAPC3-207ENST00000610884 PRIM1P49642 420 aaKnown RBP22.79■■□□□ 1.24
SNAPC3-207ENST00000610884 ANKRD44Q8N8A2 993 aa22.79■■□□□ 1.24
SNAPC3-207ENST00000610884 OTUD7AQ8TE49 926 aaPredicted RBP22.79■■□□□ 1.24
SNAPC3-207ENST00000610884 SHANK3Q9BYB0 1731 aa22.79■■□□□ 1.24
SNAPC3-207ENST00000610884 COL14A1Q05707 1796 aaKnown RBP22.79■■□□□ 1.24
SNAPC3-207ENST00000610884 NBPF26B4DH59 902 aa22.79■■□□□ 1.24
SNAPC3-207ENST00000610884 ERVV-2B6SEH9 535 aa22.79■■□□□ 1.24
SNAPC3-207ENST00000610884 NBPF14Q5TI25 921 aa22.79■■□□□ 1.24
SNAPC3-207ENST00000610884 NBPF10Q6P3W6 841 aaKnown RBP22.79■■□□□ 1.24
SNAPC3-207ENST00000610884 NBPF15Q8N660 670 aa22.79■■□□□ 1.24
SNAPC3-207ENST00000610884 ARXQ96QS3 562 aa22.78■■□□□ 1.24
SNAPC3-207ENST00000610884 RIC3Q7Z5B4 369 aa22.77■■□□□ 1.24
SNAPC3-207ENST00000610884 GNAI2P04899 355 aa22.77■■□□□ 1.24
SNAPC3-207ENST00000610884 SOS1Q07889 1333 aaPredicted RBP22.77■■□□□ 1.24
SNAPC3-207ENST00000610884 ATP5J2-PTCD1G3V325 749 aa22.76■■□□□ 1.23
SNAPC3-207ENST00000610884 FAM161AQ3B820 660 aa22.76■■□□□ 1.23
SNAPC3-207ENST00000610884 CHMP4BQ9H444 224 aaKnown RBP22.76■■□□□ 1.23
SNAPC3-207ENST00000610884 COL22A1Q8NFW1 1626 aaPredicted RBP22.76■■□□□ 1.23
SNAPC3-207ENST00000610884 UBTFL1P0CB47 393 aaPredicted RBP22.76■■□□□ 1.23
SNAPC3-207ENST00000610884 DDB1Q16531 1140 aa22.76■■□□□ 1.23
SNAPC3-207ENST00000610884 KSR2Q6VAB6 950 aa22.76■■□□□ 1.23
SNAPC3-207ENST00000610884 HYPKQ9NX55 129 aa22.76■■□□□ 1.23
SNAPC3-207ENST00000610884 ATG3Q9NT62 314 aa22.75■■□□□ 1.23
SNAPC3-207ENST00000610884 LRP10Q7Z4F1 713 aa22.74■■□□□ 1.23
SNAPC3-207ENST00000610884 MARCH10Q8NA82 808 aaPredicted RBP22.74■■□□□ 1.23
SNAPC3-207ENST00000610884 TTLL7Q6ZT98 887 aa22.74■■□□□ 1.23
SNAPC3-207ENST00000610884 DCTPP1Q9H773 170 aa22.74■■□□□ 1.23
SNAPC3-207ENST00000610884 PLCH1Q4KWH8 1693 aa22.74■■□□□ 1.23
SNAPC3-207ENST00000610884 KCNQ2O43526 872 aa22.73■■□□□ 1.23
SNAPC3-207ENST00000610884 DNAJC10Q8IXB1 793 aa22.73■■□□□ 1.23
SNAPC3-207ENST00000610884 MYD88Q99836 296 aa22.73■■□□□ 1.23
SNAPC3-207ENST00000610884 PTF1AQ7RTS3 328 aa22.73■■□□□ 1.23
SNAPC3-207ENST00000610884 RPAP2Q8IXW5 612 aaPredicted RBP22.73■■□□□ 1.23
SNAPC3-207ENST00000610884 SLC4A9Q96Q91 983 aa22.73■■□□□ 1.23
SNAPC3-207ENST00000610884 TOGARAM1Q9Y4F4 1720 aa22.73■■□□□ 1.23
SNAPC3-207ENST00000610884 DISP2A7MBM2 1401 aa22.72■■□□□ 1.23
SNAPC3-207ENST00000610884 SPATA31A5Q5VU36 1347 aa22.72■■□□□ 1.23
SNAPC3-207ENST00000610884 SPATA31A7Q8IWB4 1347 aa22.72■■□□□ 1.23
SNAPC3-207ENST00000610884 IGKV5-2P06315 115 aa22.72■■□□□ 1.23
SNAPC3-207ENST00000610884 KCNQ4P56696 695 aa22.72■■□□□ 1.23
SNAPC3-207ENST00000610884 TSHZ3Q63HK5 1081 aa22.72■■□□□ 1.23
SNAPC3-207ENST00000610884 C9orf78Q9NZ63 289 aaPredicted RBP22.72■■□□□ 1.23
SNAPC3-207ENST00000610884 MRC1P22897 1456 aa22.72■■□□□ 1.23
SNAPC3-207ENST00000610884 GNAI3P08754 354 aa22.71■■□□□ 1.23
SNAPC3-207ENST00000610884 ANKRD13DQ6ZTN6 518 aa22.71■■□□□ 1.23
SNAPC3-207ENST00000610884 GCC1Q96CN9 775 aa22.71■■□□□ 1.23
SNAPC3-207ENST00000610884 ZBTB3Q9H5J0 574 aa22.71■■□□□ 1.23
SNAPC3-207ENST00000610884 CACNA1FO60840 1977 aa22.7■■□□□ 1.23
SNAPC3-207ENST00000610884 PPP1R42Q7Z4L9 355 aa22.7■■□□□ 1.22
SNAPC3-207ENST00000610884 UNC5CLQ8IV45 518 aa22.7■■□□□ 1.22
SNAPC3-207ENST00000610884 USP21Q9UK80 565 aa22.68■■□□□ 1.22
SNAPC3-207ENST00000610884 SRGAP3O43295 1099 aa22.68■■□□□ 1.22
SNAPC3-207ENST00000610884 MEX3CQ5U5Q3 659 aaKnown RBP22.67■■□□□ 1.22
SNAPC3-207ENST00000610884 LRP6O75581 1613 aa22.67■■□□□ 1.22
SNAPC3-207ENST00000610884 JCADQ9P266 1359 aa22.67■■□□□ 1.22
SNAPC3-207ENST00000610884 BCL9LQ86UU0 1499 aa22.67■■□□□ 1.22
SNAPC3-207ENST00000610884 ATP8B2P98198 1209 aa22.67■■□□□ 1.22
SNAPC3-207ENST00000610884 IL1RAPL2Q9NP60 686 aa22.67■■□□□ 1.22
SNAPC3-207ENST00000610884 DDX58O95786 925 aaKnown RBP22.66■■□□□ 1.22
SNAPC3-207ENST00000610884 KCPQ6ZWJ8 1503 aa22.66■■□□□ 1.22
SNAPC3-207ENST00000610884 KLHDC4Q8TBB5 520 aa22.66■■□□□ 1.22
SNAPC3-207ENST00000610884 PA2G4Q9UQ80 394 aaKnown RBP22.66■■□□□ 1.22
SNAPC3-207ENST00000610884 SLIT2O94813 1529 aa22.65■■□□□ 1.22
SNAPC3-207ENST00000610884 KAZALD1Q96I82 304 aa22.65■■□□□ 1.22
SNAPC3-207ENST00000610884 SUCLG2Q96I99 432 aa22.65■■□□□ 1.22
SNAPC3-207ENST00000610884 GLI3P10071 1580 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms