RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 TMPRSS4Q9NRS4 437 aa8.2□□□□□ -1.1
LINC00397-202ENST00000606785 LOC105371045A0A1W2PR82 267 aa8.19□□□□□ -1.1
LINC00397-202ENST00000606785 H3BM21 787 aa8.19□□□□□ -1.1
LINC00397-202ENST00000606785 TCF3P15923 654 aa8.19□□□□□ -1.1
LINC00397-202ENST00000606785 GRM5P41594 1212 aa8.19□□□□□ -1.1
LINC00397-202ENST00000606785 SUZ12Q15022 739 aaKnown RBP8.19□□□□□ -1.1
LINC00397-202ENST00000606785 MPNDQ8N594 471 aa8.19□□□□□ -1.1
LINC00397-202ENST00000606785 ZNF784Q8NCA9 323 aaPredicted RBP8.19□□□□□ -1.1
LINC00397-202ENST00000606785 SLC4A9Q96Q91 983 aa8.19□□□□□ -1.1
LINC00397-202ENST00000606785 RBCK1Q9BYM8 510 aa8.19□□□□□ -1.1
LINC00397-202ENST00000606785 ETNK1Q9HBU6 452 aa8.19□□□□□ -1.1
LINC00397-202ENST00000606785 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.19□□□□□ -1.1
LINC00397-202ENST00000606785 SERTAD1Q9UHV2 236 aa8.19□□□□□ -1.1
LINC00397-202ENST00000606785 TAGLNQ01995 201 aaKnown RBP8.18□□□□□ -1.1
LINC00397-202ENST00000606785 CYP2U1Q7Z449 544 aa8.18□□□□□ -1.1
LINC00397-202ENST00000606785 GNRH1P01148 92 aa8.17□□□□□ -1.1
LINC00397-202ENST00000606785 MPSTP25325 297 aa8.17□□□□□ -1.1
LINC00397-202ENST00000606785 FOXK2Q01167 660 aa8.17□□□□□ -1.1
LINC00397-202ENST00000606785 EAPPQ56P03 285 aaPredicted RBP8.17□□□□□ -1.1
LINC00397-202ENST00000606785 ESCO1Q5FWF5 840 aa8.17□□□□□ -1.1
LINC00397-202ENST00000606785 RC3H1Q5TC82 1133 aaKnown RBP8.17□□□□□ -1.1
LINC00397-202ENST00000606785 C16orf46Q6P387 395 aa8.17□□□□□ -1.1
LINC00397-202ENST00000606785 STAG2Q8N3U4 1231 aa8.17□□□□□ -1.1
LINC00397-202ENST00000606785 CHMP7Q8WUX9 453 aaPredicted RBP8.17□□□□□ -1.1
LINC00397-202ENST00000606785 BCL11AQ9H165 835 aa8.17□□□□□ -1.1
LINC00397-202ENST00000606785 A0A1W2PRU2 124 aa8.16□□□□□ -1.1
LINC00397-202ENST00000606785 NDUFB5O43674 189 aa8.16□□□□□ -1.1
LINC00397-202ENST00000606785 PPP1R12BO60237 982 aaPredicted RBP8.16□□□□□ -1.1
LINC00397-202ENST00000606785 LILRA1O75019 489 aa8.16□□□□□ -1.1
LINC00397-202ENST00000606785 CCDC116Q8IYX3 515 aa8.16□□□□□ -1.1
LINC00397-202ENST00000606785 SAP130Q9H0E3 1048 aa8.16□□□□□ -1.1
LINC00397-202ENST00000606785 SCHIP1Q9P0W5 487 aaPredicted RBP8.16□□□□□ -1.1
LINC00397-202ENST00000606785 TLL2Q9Y6L7 1015 aa8.16□□□□□ -1.1
LINC00397-202ENST00000606785 ADH1CP00326 375 aa8.15□□□□□ -1.1
LINC00397-202ENST00000606785 NR5A1Q13285 461 aa8.15□□□□□ -1.1
LINC00397-202ENST00000606785 MTFR1Q15390 333 aa8.15□□□□□ -1.1
LINC00397-202ENST00000606785 PPP1R26Q5T8A7 1209 aaPredicted RBP8.15□□□□□ -1.1
LINC00397-202ENST00000606785 TMC7Q7Z402 723 aa8.15□□□□□ -1.1
LINC00397-202ENST00000606785 SLC9A9Q8IVB4 645 aa8.15□□□□□ -1.1
LINC00397-202ENST00000606785 USP35Q9P2H5 1018 aa8.15□□□□□ -1.1
LINC00397-202ENST00000606785 SHROOM4Q9ULL8 1493 aa8.14□□□□□ -1.11
LINC00397-202ENST00000606785 ERBB4Q15303 1308 aa8.14□□□□□ -1.11
LINC00397-202ENST00000606785 A6NJY4 79 aa8.14□□□□□ -1.11
LINC00397-202ENST00000606785 RECKO95980 971 aa8.14□□□□□ -1.11
LINC00397-202ENST00000606785 SMTNP53814 917 aa8.14□□□□□ -1.11
LINC00397-202ENST00000606785 TRIM46Q7Z4K8 759 aa8.14□□□□□ -1.11
LINC00397-202ENST00000606785 CITED4Q96RK1 184 aa8.14□□□□□ -1.11
LINC00397-202ENST00000606785 C2orf49Q9BVC5 232 aaPredicted RBP8.14□□□□□ -1.11
LINC00397-202ENST00000606785 BRPF3Q9ULD4 1205 aa8.14□□□□□ -1.11
LINC00397-202ENST00000606785 SIAH2O43255 324 aa8.13□□□□□ -1.11
LINC00397-202ENST00000606785 TREHO43280 583 aa8.13□□□□□ -1.11
LINC00397-202ENST00000606785 ALDH1A1P00352 501 aa8.13□□□□□ -1.11
LINC00397-202ENST00000606785 P4HBP07237 508 aaKnown RBP8.13□□□□□ -1.11
LINC00397-202ENST00000606785 PSMA6P60900 246 aaKnown RBP8.13□□□□□ -1.11
LINC00397-202ENST00000606785 ALKBH2Q6NS38 261 aa8.13□□□□□ -1.11
LINC00397-202ENST00000606785 STIM2Q9P246 746 aa8.13□□□□□ -1.11
LINC00397-202ENST00000606785 TNFRSF10BO14763 440 aa8.12□□□□□ -1.11
LINC00397-202ENST00000606785 BMP1P13497 986 aa8.12□□□□□ -1.11
LINC00397-202ENST00000606785 ADD1P35611 737 aaKnown RBP8.12□□□□□ -1.11
LINC00397-202ENST00000606785 EIF1AXP47813 144 aaKnown RBP8.12□□□□□ -1.11
LINC00397-202ENST00000606785 VEGFBP49765 207 aa8.12□□□□□ -1.11
LINC00397-202ENST00000606785 TBCELQ5QJ74 424 aa8.12□□□□□ -1.11
LINC00397-202ENST00000606785 COX20Q5RI15 118 aa8.12□□□□□ -1.11
LINC00397-202ENST00000606785 FMR1Q06787 632 aaKnown RBP eCLIP8.11□□□□□ -1.11
LINC00397-202ENST00000606785 XAGE2Q96GT9 111 aa8.11□□□□□ -1.11
LINC00397-202ENST00000606785 QTRT2Q9H974 415 aaKnown RBP8.11□□□□□ -1.11
LINC00397-202ENST00000606785 ARHGEF10LQ9HCE6 1279 aa8.11□□□□□ -1.11
LINC00397-202ENST00000606785 RAB6BQ9NRW1 208 aa8.11□□□□□ -1.11
LINC00397-202ENST00000606785 PGPEP1Q9NXJ5 209 aa8.11□□□□□ -1.11
LINC00397-202ENST00000606785 CHMP3Q9Y3E7 222 aa8.11□□□□□ -1.11
LINC00397-202ENST00000606785 EMILIN1Q9Y6C2 1016 aa8.11□□□□□ -1.11
LINC00397-202ENST00000606785 CDK2AP1O14519 115 aa8.1□□□□□ -1.11
LINC00397-202ENST00000606785 CAPN5O15484 640 aaPredicted RBP8.1□□□□□ -1.11
LINC00397-202ENST00000606785 FZD6O60353 706 aa8.1□□□□□ -1.11
LINC00397-202ENST00000606785 AAMPQ13685 434 aa8.1□□□□□ -1.11
LINC00397-202ENST00000606785 POTEAQ6S8J7 498 aa8.1□□□□□ -1.11
LINC00397-202ENST00000606785 TMC1Q8TDI8 760 aa8.1□□□□□ -1.11
LINC00397-202ENST00000606785 MYO19Q96H55 970 aa8.1□□□□□ -1.11
LINC00397-202ENST00000606785 DMRTB1Q96MA1 342 aa8.1□□□□□ -1.11
LINC00397-202ENST00000606785 IL2RAP01589 272 aa8.09□□□□□ -1.11
LINC00397-202ENST00000606785 NR3C2P08235 984 aa8.09□□□□□ -1.11
LINC00397-202ENST00000606785 FGD1P98174 961 aa8.09□□□□□ -1.11
LINC00397-202ENST00000606785 DSC3Q14574 896 aa8.09□□□□□ -1.11
LINC00397-202ENST00000606785 TSNAXIP1Q2TAA8 658 aa8.09□□□□□ -1.11
LINC00397-202ENST00000606785 ABTB2Q8N961 1025 aa8.09□□□□□ -1.11
LINC00397-202ENST00000606785 CCDC87Q9NVE4 849 aa8.09□□□□□ -1.11
LINC00397-202ENST00000606785 IQSEC3Q9UPP2 1182 aaPredicted RBP8.09□□□□□ -1.11
LINC00397-202ENST00000606785 VSIG8P0DPA2 414 aa8.08□□□□□ -1.12
LINC00397-202ENST00000606785 KCNMA1Q12791 1236 aa8.08□□□□□ -1.12
LINC00397-202ENST00000606785 MRPL58Q14197 206 aaKnown RBP8.08□□□□□ -1.12
LINC00397-202ENST00000606785 TLR1Q15399 786 aa8.08□□□□□ -1.12
LINC00397-202ENST00000606785 NBPF15Q8N660 670 aa8.08□□□□□ -1.12
LINC00397-202ENST00000606785 CNKSR1Q969H4 720 aa8.08□□□□□ -1.12
LINC00397-202ENST00000606785 C8orf37Q96NL8 207 aa8.08□□□□□ -1.12
LINC00397-202ENST00000606785 FAM129BQ96TA1 746 aa8.08□□□□□ -1.12
LINC00397-202ENST00000606785 ESYT1Q9BSJ8 1104 aa8.08□□□□□ -1.12
LINC00397-202ENST00000606785 LRFN2Q9ULH4 789 aa8.08□□□□□ -1.12
LINC00397-202ENST00000606785 HRH3Q9Y5N1 445 aa8.08□□□□□ -1.12
LINC00397-202ENST00000606785 USP3Q9Y6I4 520 aa8.08□□□□□ -1.12
LINC00397-202ENST00000606785 IGHA2P01877 340 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms