RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ETNK1Q9HBU6 452 aa5.72□□□□□ -1.49
HMGB1P50-201ENST00000605814 TNIKQ9UKE5 1360 aa5.71□□□□□ -1.5
HMGB1P50-201ENST00000605814 BNIP3LO60238 219 aa5.71□□□□□ -1.5
HMGB1P50-201ENST00000605814 FURINP09958 794 aa5.71□□□□□ -1.5
HMGB1P50-201ENST00000605814 TATP17735 454 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P50-201ENST00000605814 NIFKQ9BYG3 293 aaKnown RBP5.71□□□□□ -1.5
HMGB1P50-201ENST00000605814 TBC1D2BQ9UPU7 963 aa5.71□□□□□ -1.5
HMGB1P50-201ENST00000605814 DCDC2BA2VCK2 349 aa5.7□□□□□ -1.5
HMGB1P50-201ENST00000605814 NEURL1BA8MQ27 555 aa5.7□□□□□ -1.5
HMGB1P50-201ENST00000605814 ATXN7O15265 892 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P50-201ENST00000605814 ITGB2P05107 769 aa5.7□□□□□ -1.5
HMGB1P50-201ENST00000605814 THBS1P07996 1170 aa5.7□□□□□ -1.5
HMGB1P50-201ENST00000605814 ARAFP10398 606 aa5.7□□□□□ -1.5
HMGB1P50-201ENST00000605814 GDF10P55107 478 aa5.7□□□□□ -1.5
HMGB1P50-201ENST00000605814 CTBSQ01459 385 aa5.7□□□□□ -1.5
HMGB1P50-201ENST00000605814 XP32Q5T750 250 aa5.7□□□□□ -1.5
HMGB1P50-201ENST00000605814 C1orf229Q6ZS94 237 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P50-201ENST00000605814 C1orf216Q8TAB5 229 aa5.7□□□□□ -1.5
HMGB1P50-201ENST00000605814 CRISPLD1Q9H336 500 aa5.7□□□□□ -1.5
HMGB1P50-201ENST00000605814 PRR12Q9ULL5 1215 aa5.7□□□□□ -1.5
HMGB1P50-201ENST00000605814 PCDHGC4Q9Y5F7 938 aa5.7□□□□□ -1.5
HMGB1P50-201ENST00000605814 KHNYNO15037 678 aaKnown RBP5.69□□□□□ -1.5
HMGB1P50-201ENST00000605814 STAU1O95793 577 aaKnown RBP5.69□□□□□ -1.5
HMGB1P50-201ENST00000605814 COL8A1P27658 744 aa5.69□□□□□ -1.5
HMGB1P50-201ENST00000605814 ADH6P28332 368 aa5.69□□□□□ -1.5
HMGB1P50-201ENST00000605814 HRH3Q9Y5N1 445 aa5.69□□□□□ -1.5
HMGB1P50-201ENST00000605814 INHAP05111 366 aa5.68□□□□□ -1.5
HMGB1P50-201ENST00000605814 EPXP11678 715 aa5.68□□□□□ -1.5
HMGB1P50-201ENST00000605814 DEKP35659 375 aaKnown RBP5.68□□□□□ -1.5
HMGB1P50-201ENST00000605814 ABL2P42684 1182 aa5.68□□□□□ -1.5
HMGB1P50-201ENST00000605814 SEMA3FQ13275 785 aa5.68□□□□□ -1.5
HMGB1P50-201ENST00000605814 BICDL1Q6ZP65 573 aa5.68□□□□□ -1.5
HMGB1P50-201ENST00000605814 CHSY3Q70JA7 882 aa5.68□□□□□ -1.5
HMGB1P50-201ENST00000605814 NLRP8Q86W28 1048 aa5.68□□□□□ -1.5
HMGB1P50-201ENST00000605814 BTBD6Q96KE9 485 aa5.68□□□□□ -1.5
HMGB1P50-201ENST00000605814 ZCCHC2Q9C0B9 1178 aaKnown RBP5.68□□□□□ -1.5
HMGB1P50-201ENST00000605814 SUV39H2Q9H5I1 410 aa5.68□□□□□ -1.5
HMGB1P50-201ENST00000605814 CABP1Q9NZU7 370 aa5.68□□□□□ -1.5
HMGB1P50-201ENST00000605814 SERTAD1Q9UHV2 236 aa5.68□□□□□ -1.5
HMGB1P50-201ENST00000605814 C2CD2LO14523 706 aa5.67□□□□□ -1.5
HMGB1P50-201ENST00000605814 GPR37L1O60883 481 aa5.67□□□□□ -1.5
HMGB1P50-201ENST00000605814 CD33P20138 364 aa5.67□□□□□ -1.5
HMGB1P50-201ENST00000605814 BRPF1P55201 1214 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P50-201ENST00000605814 VAC14Q08AM6 782 aa5.67□□□□□ -1.5
HMGB1P50-201ENST00000605814 UBAP2LQ14157 1087 aaKnown RBP5.67□□□□□ -1.5
HMGB1P50-201ENST00000605814 EEA1Q15075 1411 aa5.66□□□□□ -1.5
HMGB1P50-201ENST00000605814 A0A1W2PNR3 127 aa5.66□□□□□ -1.5
HMGB1P50-201ENST00000605814 SPDYE3A6NKU9 549 aa5.66□□□□□ -1.5
HMGB1P50-201ENST00000605814 C1QTNF9BB2RNN3 333 aa5.66□□□□□ -1.5
HMGB1P50-201ENST00000605814 SMTNP53814 917 aa5.66□□□□□ -1.5
HMGB1P50-201ENST00000605814 PSME1Q06323 249 aa5.66□□□□□ -1.5
HMGB1P50-201ENST00000605814 MAP7D1Q3KQU3 841 aa5.66□□□□□ -1.5
HMGB1P50-201ENST00000605814 PLPP7Q8NBV4 271 aa5.66□□□□□ -1.5
HMGB1P50-201ENST00000605814 NEUROD4Q9HD90 331 aa5.66□□□□□ -1.5
HMGB1P50-201ENST00000605814 NDFIP2Q9NV92 336 aa5.66□□□□□ -1.5
HMGB1P50-201ENST00000605814 CCER2I3L3R5 266 aa5.65□□□□□ -1.5
HMGB1P50-201ENST00000605814 MAPTP10636 758 aaKnown RBP5.65□□□□□ -1.5
HMGB1P50-201ENST00000605814 ATP4AP20648 1035 aa5.65□□□□□ -1.5
HMGB1P50-201ENST00000605814 ALAS2P22557 587 aa5.65□□□□□ -1.5
HMGB1P50-201ENST00000605814 DGKGP49619 791 aa5.65□□□□□ -1.5
HMGB1P50-201ENST00000605814 WASHC4Q2M389 1173 aa5.65□□□□□ -1.5
HMGB1P50-201ENST00000605814 TSGA10IPQ3SY00 556 aa5.65□□□□□ -1.5
HMGB1P50-201ENST00000605814 LINC00114Q6XXX2 140 aa5.65□□□□□ -1.5
HMGB1P50-201ENST00000605814 NEFLP07196 543 aa5.64□□□□□ -1.51
HMGB1P50-201ENST00000605814 SCNN1DP51172 638 aa5.64□□□□□ -1.51
HMGB1P50-201ENST00000605814 PRRT3Q5FWE3 981 aa5.64□□□□□ -1.51
HMGB1P50-201ENST00000605814 Q8N3U1 123 aa5.64□□□□□ -1.51
HMGB1P50-201ENST00000605814 AVENQ9NQS1 362 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P50-201ENST00000605814 CEP162Q5TB80 1403 aa5.64□□□□□ -1.51
HMGB1P50-201ENST00000605814 BACH1O14867 736 aa5.63□□□□□ -1.51
HMGB1P50-201ENST00000605814 SOX11P35716 441 aa5.63□□□□□ -1.51
HMGB1P50-201ENST00000605814 CHRNA4P43681 627 aa5.63□□□□□ -1.51
HMGB1P50-201ENST00000605814 PCBP4P57723 403 aaKnown RBP5.63□□□□□ -1.51
HMGB1P50-201ENST00000605814 EML3Q32P44 896 aa5.63□□□□□ -1.51
HMGB1P50-201ENST00000605814 FAM182BQ5T319 152 aa5.63□□□□□ -1.51
HMGB1P50-201ENST00000605814 CD163Q86VB7 1156 aa5.63□□□□□ -1.51
HMGB1P50-201ENST00000605814 WWC1Q8IX03 1113 aa5.63□□□□□ -1.51
HMGB1P50-201ENST00000605814 PHTF2Q8N3S3 785 aa5.63□□□□□ -1.51
HMGB1P50-201ENST00000605814 GDPD2Q9HCC8 539 aa5.63□□□□□ -1.51
HMGB1P50-201ENST00000605814 DNAAF2Q9NVR5 837 aaKnown RBP5.63□□□□□ -1.51
HMGB1P50-201ENST00000605814 ZDHHC3Q9NYG2 299 aa5.63□□□□□ -1.51
HMGB1P50-201ENST00000605814 MARK1Q9P0L2 795 aa5.63□□□□□ -1.51
HMGB1P50-201ENST00000605814 CDK11AQ9UQ88 783 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P50-201ENST00000605814 SCO2A0A1W2PP80 73 aa5.62□□□□□ -1.51
HMGB1P50-201ENST00000605814 A6NJY4 79 aa5.62□□□□□ -1.51
HMGB1P50-201ENST00000605814 APBA3O96018 575 aa5.62□□□□□ -1.51
HMGB1P50-201ENST00000605814 FAM157BP0CG42 384 aa5.62□□□□□ -1.51
HMGB1P50-201ENST00000605814 SPATA31C1P0DKV0 1188 aa5.62□□□□□ -1.51
HMGB1P50-201ENST00000605814 GATA4P43694 442 aa5.62□□□□□ -1.51
HMGB1P50-201ENST00000605814 TNP2Q05952 138 aa5.62□□□□□ -1.51
HMGB1P50-201ENST00000605814 DOC2BQ14184 412 aa5.62□□□□□ -1.51
HMGB1P50-201ENST00000605814 ZNF468Q5VIY5 522 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P50-201ENST00000605814 PLVAPQ9BX97 442 aa5.62□□□□□ -1.51
HMGB1P50-201ENST00000605814 SEMA6BQ9H3T3 888 aa5.62□□□□□ -1.51
HMGB1P50-201ENST00000605814 ZNF232Q9UNY5 417 aa5.62□□□□□ -1.51
HMGB1P50-201ENST00000605814 CDK2AP1O14519 115 aa5.61□□□□□ -1.51
HMGB1P50-201ENST00000605814 IRF5Q13568 498 aa5.61□□□□□ -1.51
HMGB1P50-201ENST00000605814 FCHSD1Q86WN1 690 aa5.61□□□□□ -1.51
HMGB1P50-201ENST00000605814 NOD1Q9Y239 953 aa5.61□□□□□ -1.51
HMGB1P50-201ENST00000605814 CHMP3Q9Y3E7 222 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms