RNA–Protein interactions for RNA: ENST00000596765.5

IRF3-213, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-213ENST00000596765 NEFMP07197 916 aa17.33■□□□□ 0.36
IRF3-213ENST00000596765 RIPK4P57078 832 aa17.33■□□□□ 0.36
IRF3-213ENST00000596765 FLAD1Q8NFF5 587 aa17.33■□□□□ 0.36
IRF3-213ENST00000596765 TRIM35Q9UPQ4 493 aa17.33■□□□□ 0.36
IRF3-213ENST00000596765 ZBTB1Q9Y2K1 713 aa17.33■□□□□ 0.36
IRF3-213ENST00000596765 LAMB4A4D0S4 1761 aa17.33■□□□□ 0.36
IRF3-213ENST00000596765 TAF7Q15545 349 aaPredicted RBP17.32■□□□□ 0.36
IRF3-213ENST00000596765 RUNDC1Q96C34 613 aa17.32■□□□□ 0.36
IRF3-213ENST00000596765 ARXQ96QS3 562 aa17.32■□□□□ 0.36
IRF3-213ENST00000596765 FHDC1Q9C0D6 1143 aaPredicted RBP17.32■□□□□ 0.36
IRF3-213ENST00000596765 RTCBQ9Y3I0 505 aaKnown RBP17.32■□□□□ 0.36
IRF3-213ENST00000596765 AFDNP55196 1824 aaKnown RBP17.32■□□□□ 0.36
IRF3-213ENST00000596765 KIF13BQ9NQT8 1826 aa17.31■□□□□ 0.36
IRF3-213ENST00000596765 SOS1Q07889 1333 aaPredicted RBP17.31■□□□□ 0.36
IRF3-213ENST00000596765 HMGB2P26583 209 aaKnown RBP17.31■□□□□ 0.36
IRF3-213ENST00000596765 TTC5Q8N0Z6 440 aa17.31■□□□□ 0.36
IRF3-213ENST00000596765 CCDC87Q9NVE4 849 aa17.31■□□□□ 0.36
IRF3-213ENST00000596765 SRP68Q9UHB9 627 aaKnown RBP17.31■□□□□ 0.36
IRF3-213ENST00000596765 USP16Q9Y5T5 823 aa17.31■□□□□ 0.36
IRF3-213ENST00000596765 KIAA1551Q9HCM1 1747 aa17.3■□□□□ 0.36
IRF3-213ENST00000596765 NEUROD2Q15784 382 aa17.3■□□□□ 0.36
IRF3-213ENST00000596765 TRAPPC3LQ5T215 181 aa17.3■□□□□ 0.36
IRF3-213ENST00000596765 FMNL2Q96PY5 1086 aa17.3■□□□□ 0.36
IRF3-213ENST00000596765 A1BGP04217 495 aa17.29■□□□□ 0.36
IRF3-213ENST00000596765 NEFLP07196 543 aa17.29■□□□□ 0.36
IRF3-213ENST00000596765 GYS1P13807 737 aa17.29■□□□□ 0.36
IRF3-213ENST00000596765 SYT17Q9BSW7 474 aa17.29■□□□□ 0.36
IRF3-213ENST00000596765 SALL2Q9Y467 1007 aaPredicted RBP17.29■□□□□ 0.36
IRF3-213ENST00000596765 APAF1O14727 1248 aa17.28■□□□□ 0.36
IRF3-213ENST00000596765 ADRA2BP18089 450 aa17.28■□□□□ 0.36
IRF3-213ENST00000596765 BCORQ6W2J9 1755 aa17.28■□□□□ 0.36
IRF3-213ENST00000596765 SENP3-EIF4A1A0A087X0R7 540 aa17.27■□□□□ 0.36
IRF3-213ENST00000596765 EIF5P55010 431 aaKnown RBP17.27■□□□□ 0.36
IRF3-213ENST00000596765 EIF4A1P60842 406 aaKnown RBP17.27■□□□□ 0.36
IRF3-213ENST00000596765 USP42Q9H9J4 1324 aaKnown RBP17.26■□□□□ 0.35
IRF3-213ENST00000596765 N4BP2Q86UW6 1770 aaPredicted RBP17.26■□□□□ 0.35
IRF3-213ENST00000596765 CANXP27824 592 aaKnown RBP17.26■□□□□ 0.35
IRF3-213ENST00000596765 POLD1P28340 1107 aa17.26■□□□□ 0.35
IRF3-213ENST00000596765 PIP4K2AP48426 406 aaPredicted RBP17.26■□□□□ 0.35
IRF3-213ENST00000596765 ZNF784Q8NCA9 323 aaPredicted RBP17.26■□□□□ 0.35
IRF3-213ENST00000596765 BCL2L12Q9HB09 334 aa17.26■□□□□ 0.35
IRF3-213ENST00000596765 GTF3C3Q9Y5Q9 886 aa17.26■□□□□ 0.35
IRF3-213ENST00000596765 COL15A1P39059 1388 aa17.26■□□□□ 0.35
IRF3-213ENST00000596765 SCN7AQ01118 1682 aa17.26■□□□□ 0.35
IRF3-213ENST00000596765 FKBP8Q14318 412 aa17.25■□□□□ 0.35
IRF3-213ENST00000596765 NLGN2Q8NFZ4 835 aa17.25■□□□□ 0.35
IRF3-213ENST00000596765 NRXN2Q9P2S2 1712 aa17.24■□□□□ 0.35
IRF3-213ENST00000596765 NUP98P52948 1817 aa17.24■□□□□ 0.35
IRF3-213ENST00000596765 NBPF26B4DH59 902 aa17.24■□□□□ 0.35
IRF3-213ENST00000596765 GIGYF1O75420 1035 aaPredicted RBP17.24■□□□□ 0.35
IRF3-213ENST00000596765 SNRPA1P09661 255 aaKnown RBP17.24■□□□□ 0.35
IRF3-213ENST00000596765 RFC4P35249 363 aa17.24■□□□□ 0.35
IRF3-213ENST00000596765 NBPF10Q6P3W6 841 aaKnown RBP17.24■□□□□ 0.35
IRF3-213ENST00000596765 NBPF15Q8N660 670 aa17.24■□□□□ 0.35
IRF3-213ENST00000596765 BRCA1P38398 1863 aaKnown RBP17.24■□□□□ 0.35
IRF3-213ENST00000596765 STARD3NLO95772 234 aa17.23■□□□□ 0.35
IRF3-213ENST00000596765 MMP10P09238 476 aa17.23■□□□□ 0.35
IRF3-213ENST00000596765 NCBP3Q53F19 620 aaKnown RBP17.23■□□□□ 0.35
IRF3-213ENST00000596765 TEX13AQ9BXU3 409 aaPredicted RBP17.23■□□□□ 0.35
IRF3-213ENST00000596765 CHD4Q14839 1912 aa17.23■□□□□ 0.35
IRF3-213ENST00000596765 CHL1O00533 1208 aa17.22■□□□□ 0.35
IRF3-213ENST00000596765 DDR1Q08345 913 aa17.22■□□□□ 0.35
IRF3-213ENST00000596765 GOLGA2Q08379 1002 aa17.22■□□□□ 0.35
IRF3-213ENST00000596765 KRT24Q2M2I5 525 aa17.22■□□□□ 0.35
IRF3-213ENST00000596765 USPL1Q5W0Q7 1092 aa17.22■□□□□ 0.35
IRF3-213ENST00000596765 NARFQ9UHQ1 456 aa17.22■□□□□ 0.35
IRF3-213ENST00000596765 TM4SF1P30408 202 aa17.21■□□□□ 0.35
IRF3-213ENST00000596765 TSPYL4Q9UJ04 414 aa17.21■□□□□ 0.35
IRF3-213ENST00000596765 ANKRD31Q8N7Z5 1873 aa17.2■□□□□ 0.34
IRF3-213ENST00000596765 LMOD3Q0VAK6 560 aa17.2■□□□□ 0.34
IRF3-213ENST00000596765 KLHL34Q8N239 644 aa17.2■□□□□ 0.34
IRF3-213ENST00000596765 NLGN1Q8N2Q7 840 aa17.2■□□□□ 0.34
IRF3-213ENST00000596765 ZNF853P0CG23 659 aa17.19■□□□□ 0.34
IRF3-213ENST00000596765 IL6STP40189 918 aaPredicted RBP17.19■□□□□ 0.34
IRF3-213ENST00000596765 GPR162Q16538 588 aa17.19■□□□□ 0.34
IRF3-213ENST00000596765 TBC1D2BQ9UPU7 963 aa17.19■□□□□ 0.34
IRF3-213ENST00000596765 CCDC27Q2M243 656 aa17.18■□□□□ 0.34
IRF3-213ENST00000596765 BABAM1Q9NWV8 329 aa17.18■□□□□ 0.34
IRF3-213ENST00000596765 POLRMTO00411 1230 aaKnown RBP17.17■□□□□ 0.34
IRF3-213ENST00000596765 CAMTA2O94983 1202 aa17.17■□□□□ 0.34
IRF3-213ENST00000596765 NFIXQ14938 502 aa17.17■□□□□ 0.34
IRF3-213ENST00000596765 C10orf71Q711Q0 1435 aa17.17■□□□□ 0.34
IRF3-213ENST00000596765 LRP10Q7Z4F1 713 aa17.17■□□□□ 0.34
IRF3-213ENST00000596765 CD2APQ9Y5K6 639 aa17.17■□□□□ 0.34
IRF3-213ENST00000596765 E9PSI1 815 aa17.16■□□□□ 0.34
IRF3-213ENST00000596765 ZPR1O75312 459 aa17.16■□□□□ 0.34
IRF3-213ENST00000596765 C1QTNF8P60827 252 aa17.16■□□□□ 0.34
IRF3-213ENST00000596765 ZNF330Q9Y3S2 320 aaPredicted RBP17.16■□□□□ 0.34
IRF3-213ENST00000596765 LAS1LQ9Y4W2 734 aaKnown RBP17.16■□□□□ 0.34
IRF3-213ENST00000596765 PDIA6Q15084 440 aa17.15■□□□□ 0.34
IRF3-213ENST00000596765 WDR63Q8IWG1 891 aa17.15■□□□□ 0.34
IRF3-213ENST00000596765 PELP1Q8IZL8 1130 aaKnown RBP17.15■□□□□ 0.34
IRF3-213ENST00000596765 CFAP44Q96MT7 982 aa17.15■□□□□ 0.34
IRF3-213ENST00000596765 MBIPQ9NS73 344 aa17.15■□□□□ 0.34
IRF3-213ENST00000596765 SUPT16HQ9Y5B9 1047 aaKnown RBP17.15■□□□□ 0.34
IRF3-213ENST00000596765 ZNF521Q96K83 1311 aa17.15■□□□□ 0.34
IRF3-213ENST00000596765 PXDNLA1KZ92 1463 aa17.14■□□□□ 0.33
IRF3-213ENST00000596765 PROSER3Q2NL68 480 aa17.14■□□□□ 0.33
IRF3-213ENST00000596765 TBC1D9BQ66K14 1250 aa17.14■□□□□ 0.33
IRF3-213ENST00000596765 WWC1Q8IX03 1113 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms