RNA–Protein interactions for RNA: ENST00000588012.5

PTPRS-205, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRS, Length 5,993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-205ENST00000588012 SCLT1Q96NL6 688 aa18.63■□□□□ 0.57
PTPRS-205ENST00000588012 CCDC83Q8IWF9 413 aa18.63■□□□□ 0.57
PTPRS-205ENST00000588012 IBSPP21815 317 aaPredicted RBP18.63■□□□□ 0.57
PTPRS-205ENST00000588012 SLC12A7Q9Y666 1083 aa18.63■□□□□ 0.57
PTPRS-205ENST00000588012 FLIIQ13045 1269 aa18.63■□□□□ 0.57
PTPRS-205ENST00000588012 EHMT1Q9H9B1 1298 aa18.63■□□□□ 0.57
PTPRS-205ENST00000588012 RFC4P35249 363 aa18.62■□□□□ 0.57
PTPRS-205ENST00000588012 DNAI2Q9GZS0 605 aa18.62■□□□□ 0.57
PTPRS-205ENST00000588012 TTF1Q15361 905 aaPredicted RBP18.62■□□□□ 0.57
PTPRS-205ENST00000588012 PHAXQ9H814 394 aaKnown RBP18.62■□□□□ 0.57
PTPRS-205ENST00000588012 ST5P78524 1137 aa18.61■□□□□ 0.57
PTPRS-205ENST00000588012 NEFHP12036 1026 aa18.61■□□□□ 0.57
PTPRS-205ENST00000588012 EIF5P55010 431 aaKnown RBP18.61■□□□□ 0.57
PTPRS-205ENST00000588012 MAP3K1Q13233 1512 aa18.61■□□□□ 0.57
PTPRS-205ENST00000588012 URB2Q14146 1524 aaKnown RBP18.61■□□□□ 0.57
PTPRS-205ENST00000588012 TEX14Q8IWB6 1497 aa18.61■□□□□ 0.57
PTPRS-205ENST00000588012 NEBLO76041 1014 aa18.6■□□□□ 0.57
PTPRS-205ENST00000588012 POTEJP0CG39 1038 aa18.6■□□□□ 0.57
PTPRS-205ENST00000588012 ANKRD18AQ8IVF6 992 aa18.6■□□□□ 0.57
PTPRS-205ENST00000588012 KDM5BQ9UGL1 1544 aa18.6■□□□□ 0.57
PTPRS-205ENST00000588012 ANKRD36BQ8N2N9 1353 aa18.6■□□□□ 0.57
PTPRS-205ENST00000588012 PIK3R4Q99570 1358 aa18.6■□□□□ 0.57
PTPRS-205ENST00000588012 GOLGA6L10A6NI86 522 aa18.6■□□□□ 0.57
PTPRS-205ENST00000588012 LDHCP07864 332 aa18.6■□□□□ 0.57
PTPRS-205ENST00000588012 CHRNA2Q15822 529 aa18.6■□□□□ 0.57
PTPRS-205ENST00000588012 PAXIP1Q6ZW49 1069 aaPredicted RBP18.6■□□□□ 0.57
PTPRS-205ENST00000588012 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
PTPRS-205ENST00000588012 SNRPA1P09661 255 aaKnown RBP18.59■□□□□ 0.57
PTPRS-205ENST00000588012 SSRP1Q08945 709 aaKnown RBP18.59■□□□□ 0.57
PTPRS-205ENST00000588012 SH2B1Q9NRF2 756 aaPredicted RBP18.59■□□□□ 0.57
PTPRS-205ENST00000588012 RAB34Q9BZG1 259 aa18.59■□□□□ 0.57
PTPRS-205ENST00000588012 CHMP4BP1P59074 171 aa18.59■□□□□ 0.57
PTPRS-205ENST00000588012 TMEM266Q2M3C6 531 aa18.59■□□□□ 0.57
PTPRS-205ENST00000588012 TSG101Q99816 390 aa18.59■□□□□ 0.57
PTPRS-205ENST00000588012 SEPT7Q16181 437 aaKnown RBP18.59■□□□□ 0.57
PTPRS-205ENST00000588012 CATIPQ7Z7H3 387 aa18.58■□□□□ 0.57
PTPRS-205ENST00000588012 EVI5LQ96CN4 794 aa18.58■□□□□ 0.57
PTPRS-205ENST00000588012 C8orf76Q96K31 380 aa18.58■□□□□ 0.57
PTPRS-205ENST00000588012 AXDND1Q5T1B0 1012 aaPredicted RBP18.58■□□□□ 0.57
PTPRS-205ENST00000588012 WDR78Q5VTH9 848 aa18.58■□□□□ 0.57
PTPRS-205ENST00000588012 LDHAL6AQ6ZMR3 332 aa18.58■□□□□ 0.57
PTPRS-205ENST00000588012 ZNF397Q8NF99 534 aaPredicted RBP18.58■□□□□ 0.57
PTPRS-205ENST00000588012 ZNF622Q969S3 477 aaKnown RBP eCLIP18.58■□□□□ 0.572e-7■■□□□ 13.5
PTPRS-205ENST00000588012 IFIT3O14879 490 aaKnown RBP18.58■□□□□ 0.56
PTPRS-205ENST00000588012 SPTY2D1Q68D10 685 aaPredicted RBP18.58■□□□□ 0.56
PTPRS-205ENST00000588012 GOLGA8AA7E2F4 631 aa18.58■□□□□ 0.56
PTPRS-205ENST00000588012 GOLGA8BA8MQT2 603 aa18.58■□□□□ 0.56
PTPRS-205ENST00000588012 MAP3K11Q16584 847 aa18.57■□□□□ 0.56
PTPRS-205ENST00000588012 ZNF608Q9ULD9 1512 aaPredicted RBP18.57■□□□□ 0.56
PTPRS-205ENST00000588012 BAG3O95817 575 aa18.57■□□□□ 0.56
PTPRS-205ENST00000588012 IQCEQ6IPM2 695 aa18.57■□□□□ 0.56
PTPRS-205ENST00000588012 TTC21AQ8NDW8 1320 aa18.57■□□□□ 0.56
PTPRS-205ENST00000588012 ATP5J2-PTCD1G3V325 749 aa18.57■□□□□ 0.56
PTPRS-205ENST00000588012 ZRSR2Q15696 482 aaKnown RBP18.57■□□□□ 0.56
PTPRS-205ENST00000588012 TOM1O60784 492 aa18.56■□□□□ 0.56
PTPRS-205ENST00000588012 HMGN5P82970 282 aaKnown RBP18.56■□□□□ 0.56
PTPRS-205ENST00000588012 NLRP5P59047 1200 aa18.56■□□□□ 0.56
PTPRS-205ENST00000588012 PLEKHH1Q9ULM0 1364 aa18.56■□□□□ 0.56
PTPRS-205ENST00000588012 JAKMIP3Q5VZ66 844 aa18.55■□□□□ 0.56
PTPRS-205ENST00000588012 KIAA1328Q86T90 577 aa18.55■□□□□ 0.56
PTPRS-205ENST00000588012 FERMT3Q86UX7 667 aa18.55■□□□□ 0.56
PTPRS-205ENST00000588012 FAM177A1Q8N128 213 aaPredicted RBP18.55■□□□□ 0.56
PTPRS-205ENST00000588012 CCDC194A0A1B0GVG4 234 aa18.55■□□□□ 0.56
PTPRS-205ENST00000588012 EPB41L2O43491 1005 aaKnown RBP18.55■□□□□ 0.56
PTPRS-205ENST00000588012 CCDC152Q4G0S7 254 aa18.55■□□□□ 0.56
PTPRS-205ENST00000588012 NBPF6Q5VWK0 638 aa18.55■□□□□ 0.56
PTPRS-205ENST00000588012 NBPF5PQ86XG9 351 aaPredicted RBP18.55■□□□□ 0.56
PTPRS-205ENST00000588012 NBPF4Q96M43 638 aa18.55■□□□□ 0.56
PTPRS-205ENST00000588012 GOLIM4O00461 696 aa18.55■□□□□ 0.56
PTPRS-205ENST00000588012 SSR1P43307 286 aaKnown RBP18.55■□□□□ 0.56
PTPRS-205ENST00000588012 MTERF4Q7Z6M4 381 aaKnown RBP18.55■□□□□ 0.56
PTPRS-205ENST00000588012 HLA-DOAP06340 250 aa18.55■□□□□ 0.56
PTPRS-205ENST00000588012 ZCRB1Q8TBF4 217 aaKnown RBP18.55■□□□□ 0.56
PTPRS-205ENST00000588012 TAF4BQ92750 862 aa18.55■□□□□ 0.56
PTPRS-205ENST00000588012 FEZ1Q99689 392 aa18.55■□□□□ 0.56
PTPRS-205ENST00000588012 CABP5Q9NP86 173 aa18.55■□□□□ 0.56
PTPRS-205ENST00000588012 BICRAQ9NZM4 1560 aa18.55■□□□□ 0.56
PTPRS-205ENST00000588012 MBIPQ9NS73 344 aa18.55■□□□□ 0.56
PTPRS-205ENST00000588012 NPHP3Q7Z494 1330 aa18.54■□□□□ 0.56
PTPRS-205ENST00000588012 ECHDC1Q9NTX5 307 aa18.54■□□□□ 0.56
PTPRS-205ENST00000588012 CWC15Q9P013 229 aaKnown RBP18.54■□□□□ 0.56
PTPRS-205ENST00000588012 PDE4BQ07343 736 aa18.54■□□□□ 0.56
PTPRS-205ENST00000588012 GSTO1P78417 241 aa18.54■□□□□ 0.56
PTPRS-205ENST00000588012 BAG4O95429 457 aaKnown RBP18.54■□□□□ 0.56
PTPRS-205ENST00000588012 UBE3BQ7Z3V4 1068 aa18.54■□□□□ 0.56
PTPRS-205ENST00000588012 CCDC82Q8N4S0 544 aa18.54■□□□□ 0.56
PTPRS-205ENST00000588012 CCDC12Q8WUD4 166 aaPredicted RBP18.54■□□□□ 0.56
PTPRS-205ENST00000588012 CAMK4Q16566 473 aa18.54■□□□□ 0.56
PTPRS-205ENST00000588012 UBA5Q9GZZ9 404 aa18.54■□□□□ 0.56
PTPRS-205ENST00000588012 FKBP15Q5T1M5 1219 aa18.53■□□□□ 0.56
PTPRS-205ENST00000588012 GRPEL1Q9HAV7 217 aa18.53■□□□□ 0.56
PTPRS-205ENST00000588012 UHRF1BP1LA0JNW5 1464 aa18.53■□□□□ 0.56
PTPRS-205ENST00000588012 ANKRD62A6NC57 917 aa18.53■□□□□ 0.56
PTPRS-205ENST00000588012 UBAP1LF5GYI3 381 aa18.53■□□□□ 0.56
PTPRS-205ENST00000588012 H0YHG0 523 aa18.53■□□□□ 0.56
PTPRS-205ENST00000588012 CFAP100Q494V2 611 aa18.53■□□□□ 0.56
PTPRS-205ENST00000588012 MYO1BO43795 1136 aa18.53■□□□□ 0.56
PTPRS-205ENST00000588012 CCDC191Q8NCU4 936 aa18.53■□□□□ 0.56
PTPRS-205ENST00000588012 ERLIN1O75477 346 aa18.52■□□□□ 0.56
PTPRS-205ENST00000588012 TRIM27P14373 513 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms