RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 C1orf141Q5JVX7 400 aa16.13■□□□□ 0.17
CSNK1D-222ENST00000584377 SURF6O75683 361 aaKnown RBP16.13■□□□□ 0.17
CSNK1D-222ENST00000584377 NUCB2P80303 420 aa16.13■□□□□ 0.17
CSNK1D-222ENST00000584377 PRDM4Q9UKN5 801 aa16.13■□□□□ 0.17
CSNK1D-222ENST00000584377 CHMLP26374 656 aa16.12■□□□□ 0.17
CSNK1D-222ENST00000584377 BEND3Q5T5X7 828 aa16.12■□□□□ 0.17
CSNK1D-222ENST00000584377 GRPEL1Q9HAV7 217 aa16.12■□□□□ 0.17
CSNK1D-222ENST00000584377 RGPD2P0DJD1 1756 aa16.12■□□□□ 0.17
CSNK1D-222ENST00000584377 SRGAP3O43295 1099 aa16.12■□□□□ 0.17
CSNK1D-222ENST00000584377 RAB11FIP3O75154 756 aa16.12■□□□□ 0.17
CSNK1D-222ENST00000584377 ANXA1P04083 346 aa16.12■□□□□ 0.17
CSNK1D-222ENST00000584377 NBPF7P0C2Y1 421 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-222ENST00000584377 POLA2Q14181 598 aa16.12■□□□□ 0.17
CSNK1D-222ENST00000584377 CWC22Q9HCG8 908 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-222ENST00000584377 KDM3BQ7LBC6 1761 aa16.12■□□□□ 0.17
CSNK1D-222ENST00000584377 AOX1Q06278 1338 aa16.12■□□□□ 0.17
CSNK1D-222ENST00000584377 BAG4O95429 457 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-222ENST00000584377 ANKRD24Q8TF21 1146 aa16.12■□□□□ 0.17
CSNK1D-222ENST00000584377 RNMTO43148 476 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-222ENST00000584377 MCCP23508 829 aa16.11■□□□□ 0.17
CSNK1D-222ENST00000584377 RBM10P98175 930 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-222ENST00000584377 ANO2Q9NQ90 1003 aa16.11■□□□□ 0.17
CSNK1D-222ENST00000584377 ISY1Q9ULR0 285 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-222ENST00000584377 LMO7Q8WWI1 1683 aa16.11■□□□□ 0.17
CSNK1D-222ENST00000584377 NUTM1Q86Y26 1132 aa16.11■□□□□ 0.17
CSNK1D-222ENST00000584377 UNC5CLQ8IV45 518 aa16.11■□□□□ 0.17
CSNK1D-222ENST00000584377 PXDNQ92626 1479 aa16.1■□□□□ 0.17
CSNK1D-222ENST00000584377 NEK4P51957 841 aa16.1■□□□□ 0.17
CSNK1D-222ENST00000584377 DBF4Q9UBU7 674 aaPredicted RBP16.1■□□□□ 0.17
CSNK1D-222ENST00000584377 SLIT3O75094 1523 aa16.1■□□□□ 0.17
CSNK1D-222ENST00000584377 TUBGCP6Q96RT7 1819 aa16.1■□□□□ 0.17
CSNK1D-222ENST00000584377 ZGPATQ8N5A5 531 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-222ENST00000584377 RHPN1Q8TCX5 695 aa16.1■□□□□ 0.17
CSNK1D-222ENST00000584377 TRIM44Q96DX7 344 aaPredicted RBP16.1■□□□□ 0.17
CSNK1D-222ENST00000584377 NCAPD2Q15021 1401 aa16.1■□□□□ 0.17
CSNK1D-222ENST00000584377 CYP2E1P05181 493 aaPredicted RBP16.09■□□□□ 0.17
CSNK1D-222ENST00000584377 ADCY9O60503 1353 aa16.09■□□□□ 0.17
CSNK1D-222ENST00000584377 PKP1Q13835 747 aa16.09■□□□□ 0.17
CSNK1D-222ENST00000584377 KIF1BPQ96EK5 621 aa16.09■□□□□ 0.17
CSNK1D-222ENST00000584377 AXIN2Q9Y2T1 843 aa16.08■□□□□ 0.16
CSNK1D-222ENST00000584377 A0A0U1RQG5 324 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-222ENST00000584377 ANAPC15P60006 121 aa16.08■□□□□ 0.16
CSNK1D-222ENST00000584377 KRT28Q7Z3Y7 464 aa16.08■□□□□ 0.16
CSNK1D-222ENST00000584377 PALD1Q9ULE6 856 aa16.08■□□□□ 0.16
CSNK1D-222ENST00000584377 AK9Q5TCS8 1911 aa16.07■□□□□ 0.16
CSNK1D-222ENST00000584377 GIGYF1O75420 1035 aaPredicted RBP16.07■□□□□ 0.16
CSNK1D-222ENST00000584377 KIAA1211Q6ZU35 1233 aa16.07■□□□□ 0.16
CSNK1D-222ENST00000584377 OVOS2A0A0G2JMS6 1433 aa16.07■□□□□ 0.16
CSNK1D-222ENST00000584377 MCM2P49736 904 aa16.07■□□□□ 0.16
CSNK1D-222ENST00000584377 ADAMTSL3P82987 1691 aa16.07■□□□□ 0.16
CSNK1D-222ENST00000584377 HSP90AB4PQ58FF6 505 aa16.06■□□□□ 0.16
CSNK1D-222ENST00000584377 MCTP1Q6DN14 999 aa16.06■□□□□ 0.16
CSNK1D-222ENST00000584377 PROSER2Q86WR7 435 aaPredicted RBP16.06■□□□□ 0.16
CSNK1D-222ENST00000584377 DDX49Q9Y6V7 483 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-222ENST00000584377 KLHL40Q2TBA0 621 aa16.06■□□□□ 0.16
CSNK1D-222ENST00000584377 PI4K2BQ8TCG2 481 aa16.06■□□□□ 0.16
CSNK1D-222ENST00000584377 TMX3Q96JJ7 454 aa16.06■□□□□ 0.16
CSNK1D-222ENST00000584377 MAP3K2Q9Y2U5 619 aa16.06■□□□□ 0.16
CSNK1D-222ENST00000584377 PROSER3Q2NL68 480 aa16.05■□□□□ 0.16
CSNK1D-222ENST00000584377 MAP4K4O95819 1239 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-222ENST00000584377 GAS2L3Q86XJ1 694 aa16.05■□□□□ 0.16
CSNK1D-222ENST00000584377 HEG1Q9ULI3 1381 aa16.05■□□□□ 0.16
CSNK1D-222ENST00000584377 C9orf78Q9NZ63 289 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-222ENST00000584377 PRAMEF22A3QJZ6 481 aa16.04■□□□□ 0.16
CSNK1D-222ENST00000584377 ALDH1L1O75891 902 aa16.04■□□□□ 0.16
CSNK1D-222ENST00000584377 OS9Q13438 667 aaPredicted RBP16.04■□□□□ 0.16
CSNK1D-222ENST00000584377 KSR2Q6VAB6 950 aa16.04■□□□□ 0.16
CSNK1D-222ENST00000584377 IL25Q9H293 177 aa16.04■□□□□ 0.16
CSNK1D-222ENST00000584377 MTX1Q13505 466 aa16.03■□□□□ 0.16
CSNK1D-222ENST00000584377 C1orf167Q5SNV9 1468 aa16.03■□□□□ 0.16
CSNK1D-222ENST00000584377 ERBB3P21860 1342 aa16.03■□□□□ 0.16
CSNK1D-222ENST00000584377 EPB41L2O43491 1005 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-222ENST00000584377 ZC3H6P61129 1189 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-222ENST00000584377 CNTROBQ8N137 903 aa16.03■□□□□ 0.16
CSNK1D-222ENST00000584377 ZDHHC9Q9Y397 364 aa16.03■□□□□ 0.16
CSNK1D-222ENST00000584377 IL17RAQ96F46 866 aa16.02■□□□□ 0.16
CSNK1D-222ENST00000584377 C19orf44Q9H6X5 657 aa16.02■□□□□ 0.16
CSNK1D-222ENST00000584377 HYPKQ9NX55 129 aa16.02■□□□□ 0.16
CSNK1D-222ENST00000584377 TRPM3Q9HCF6 1732 aaPredicted RBP16.02■□□□□ 0.16
CSNK1D-222ENST00000584377 UPF3BQ9BZI7 483 aaKnown RBP16.02■□□□□ 0.15
CSNK1D-222ENST00000584377 CAMTA1Q9Y6Y1 1673 aa16.01■□□□□ 0.15
CSNK1D-222ENST00000584377 CWF19L2Q2TBE0 894 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-222ENST00000584377 LMBRD1Q9NUN5 540 aa16.01■□□□□ 0.15
CSNK1D-222ENST00000584377 HDAC5Q9UQL6 1122 aa16.01■□□□□ 0.15
CSNK1D-222ENST00000584377 HSPA4P34932 840 aa16.01■□□□□ 0.15
CSNK1D-222ENST00000584377 CUL4AQ13619 759 aa16.01■□□□□ 0.15
CSNK1D-222ENST00000584377 NOL8Q76FK4 1167 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-222ENST00000584377 SGSM2O43147 1006 aa16.01■□□□□ 0.15
CSNK1D-222ENST00000584377 CLASRPQ8N2M8 674 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-222ENST00000584377 RAPGEF4Q8WZA2 1011 aa16.01■□□□□ 0.15
CSNK1D-222ENST00000584377 TTC41PQ6P2S7 1318 aa16■□□□□ 0.15
CSNK1D-222ENST00000584377 USP42Q9H9J4 1324 aaKnown RBP16■□□□□ 0.15
CSNK1D-222ENST00000584377 GLRX3O76003 335 aaKnown RBP16■□□□□ 0.15
CSNK1D-222ENST00000584377 DDX58O95786 925 aaKnown RBP16■□□□□ 0.15
CSNK1D-222ENST00000584377 LINS1Q8NG48 757 aa16■□□□□ 0.15
CSNK1D-222ENST00000584377 DDX21Q9NR30 783 aaKnown RBP eCLIP16■□□□□ 0.15
CSNK1D-222ENST00000584377 RAD50Q92878 1312 aa15.99■□□□□ 0.15
CSNK1D-222ENST00000584377 NCLP19338 710 aaKnown RBP15.99■□□□□ 0.15
CSNK1D-222ENST00000584377 INTS4Q96HW7 963 aaKnown RBP15.99■□□□□ 0.15
CSNK1D-222ENST00000584377 NLRP2Q9NX02 1062 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms