RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 NSD3Q9BZ95 1437 aa12.96□□□□□ -0.34
NPLOC4-210ENST00000572824 NINLQ9Y2I6 1382 aa12.95□□□□□ -0.34
NPLOC4-210ENST00000572824 MAP2P11137 1827 aaKnown RBP12.95□□□□□ -0.34
NPLOC4-210ENST00000572824 ZNF710Q8N1W2 664 aa12.95□□□□□ -0.34
NPLOC4-210ENST00000572824 DDX54Q8TDD1 881 aaKnown RBP12.95□□□□□ -0.34
NPLOC4-210ENST00000572824 CARD14Q9BXL6 1004 aa12.95□□□□□ -0.34
NPLOC4-210ENST00000572824 SPON1Q9HCB6 807 aa12.95□□□□□ -0.34
NPLOC4-210ENST00000572824 QSER1Q2KHR3 1735 aa12.95□□□□□ -0.34
NPLOC4-210ENST00000572824 ITGB4P16144 1822 aa12.95□□□□□ -0.34
NPLOC4-210ENST00000572824 SLC15A2Q16348 729 aa12.94□□□□□ -0.34
NPLOC4-210ENST00000572824 NBPF6Q5VWK0 638 aa12.94□□□□□ -0.34
NPLOC4-210ENST00000572824 KHSRPQ92945 711 aaKnown RBP eCLIP12.94□□□□□ -0.34
NPLOC4-210ENST00000572824 NBPF4Q96M43 638 aa12.94□□□□□ -0.34
NPLOC4-210ENST00000572824 PUS7Q96PZ0 661 aaKnown RBP12.94□□□□□ -0.34
NPLOC4-210ENST00000572824 PKD1L3Q7Z443 1732 aa12.93□□□□□ -0.34
NPLOC4-210ENST00000572824 OSBPP22059 807 aa12.93□□□□□ -0.34
NPLOC4-210ENST00000572824 AMPHP49418 695 aa12.93□□□□□ -0.34
NPLOC4-210ENST00000572824 PCGF6Q9BYE7 350 aa12.93□□□□□ -0.34
NPLOC4-210ENST00000572824 EMILIN1Q9Y6C2 1016 aa12.93□□□□□ -0.34
NPLOC4-210ENST00000572824 TAF1LQ8IZX4 1826 aa12.92□□□□□ -0.34
NPLOC4-210ENST00000572824 NUDT7P0C024 238 aa12.92□□□□□ -0.34
NPLOC4-210ENST00000572824 TMF1P82094 1093 aa12.92□□□□□ -0.34
NPLOC4-210ENST00000572824 COL24A1Q17RW2 1714 aa12.92□□□□□ -0.34
NPLOC4-210ENST00000572824 HSP90AB2PQ58FF8 381 aa12.92□□□□□ -0.34
NPLOC4-210ENST00000572824 STK32BQ9NY57 414 aa12.92□□□□□ -0.34
NPLOC4-210ENST00000572824 PPP1R1BQ9UD71 204 aaPredicted RBP12.92□□□□□ -0.34
NPLOC4-210ENST00000572824 RTL1A6NKG5 1358 aa12.92□□□□□ -0.34
NPLOC4-210ENST00000572824 C11orf95C9JLR9 678 aaPredicted RBP12.91□□□□□ -0.34
NPLOC4-210ENST00000572824 ZC3H15Q8WU90 426 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-210ENST00000572824 C5P01031 1676 aa12.91□□□□□ -0.34
NPLOC4-210ENST00000572824 SYTL4Q96C24 671 aaPredicted RBP12.9□□□□□ -0.34
NPLOC4-210ENST00000572824 PRIM1P49642 420 aaKnown RBP12.89□□□□□ -0.35
NPLOC4-210ENST00000572824 PHF14O94880 888 aa12.88□□□□□ -0.35
NPLOC4-210ENST00000572824 POLR3GLQ9BT43 218 aa12.88□□□□□ -0.35
NPLOC4-210ENST00000572824 FHDC1Q9C0D6 1143 aaPredicted RBP12.88□□□□□ -0.35
NPLOC4-210ENST00000572824 PNPLA7Q6ZV29 1317 aa12.88□□□□□ -0.35
NPLOC4-210ENST00000572824 FLT4P35916 1363 aa12.87□□□□□ -0.35
NPLOC4-210ENST00000572824 PCDHGA10Q9Y5H3 936 aa12.87□□□□□ -0.35
NPLOC4-210ENST00000572824 GOLGB1Q14789 3259 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-210ENST00000572824 INSRP06213 1382 aa12.86□□□□□ -0.35
NPLOC4-210ENST00000572824 SMIM5Q71RC9 77 aa12.86□□□□□ -0.35
NPLOC4-210ENST00000572824 GPIHBP1Q8IV16 184 aa12.86□□□□□ -0.35
NPLOC4-210ENST00000572824 ZCRB1Q8TBF4 217 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-210ENST00000572824 EPAS1Q99814 870 aa12.86□□□□□ -0.35
NPLOC4-210ENST00000572824 CYP27B1O15528 508 aa12.85□□□□□ -0.35
NPLOC4-210ENST00000572824 HOXB1P14653 301 aaPredicted RBP12.85□□□□□ -0.35
NPLOC4-210ENST00000572824 CHD4Q14839 1912 aa12.85□□□□□ -0.35
NPLOC4-210ENST00000572824 NCAPD2Q15021 1401 aa12.85□□□□□ -0.35
NPLOC4-210ENST00000572824 UBR3Q6ZT12 1888 aa12.85□□□□□ -0.35
NPLOC4-210ENST00000572824 PPM1GO15355 546 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-210ENST00000572824 YY1P25490 414 aa12.84□□□□□ -0.35
NPLOC4-210ENST00000572824 TNNT2P45379 298 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-210ENST00000572824 FOSBP53539 338 aa12.84□□□□□ -0.35
NPLOC4-210ENST00000572824 AMIGO3Q86WK7 504 aa12.84□□□□□ -0.35
NPLOC4-210ENST00000572824 MTFR1LQ9H019 292 aa12.84□□□□□ -0.35
NPLOC4-210ENST00000572824 SMG6Q86US8 1419 aaKnown RBP12.84□□□□□ -0.35
NPLOC4-210ENST00000572824 C4BP0C0L5 1744 aa12.83□□□□□ -0.36
NPLOC4-210ENST00000572824 HSPA5P11021 654 aaKnown RBP12.83□□□□□ -0.36
NPLOC4-210ENST00000572824 SYT17Q9BSW7 474 aa12.83□□□□□ -0.36
NPLOC4-210ENST00000572824 MSL1Q68DK7 614 aa12.82□□□□□ -0.36
NPLOC4-210ENST00000572824 ZMYND10O75800 440 aa12.81□□□□□ -0.36
NPLOC4-210ENST00000572824 TATP17735 454 aaPredicted RBP12.81□□□□□ -0.36
NPLOC4-210ENST00000572824 TYW1BQ6NUM6 668 aa12.81□□□□□ -0.36
NPLOC4-210ENST00000572824 NLGN2Q8NFZ4 835 aa12.81□□□□□ -0.36
NPLOC4-210ENST00000572824 RAPGEF4Q8WZA2 1011 aa12.81□□□□□ -0.36
NPLOC4-210ENST00000572824 CCNL1Q9UK58 526 aaPredicted RBP12.81□□□□□ -0.36
NPLOC4-210ENST00000572824 LHX6Q9UPM6 363 aa12.81□□□□□ -0.36
NPLOC4-210ENST00000572824 GPR37O15354 613 aa12.8□□□□□ -0.36
NPLOC4-210ENST00000572824 ZNF454Q8N9F8 522 aa12.8□□□□□ -0.36
NPLOC4-210ENST00000572824 ARXQ96QS3 562 aa12.8□□□□□ -0.36
NPLOC4-210ENST00000572824 PALLDQ8WX93 1383 aa12.8□□□□□ -0.36
NPLOC4-210ENST00000572824 MPRIPQ6WCQ1 1025 aa12.79□□□□□ -0.36
NPLOC4-210ENST00000572824 COL23A1Q86Y22 540 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-210ENST00000572824 FBXW7Q969H0 707 aa12.79□□□□□ -0.36
NPLOC4-210ENST00000572824 EYA1Q99502 592 aa12.79□□□□□ -0.36
NPLOC4-210ENST00000572824 TFCP2L1Q9NZI6 479 aa12.79□□□□□ -0.36
NPLOC4-210ENST00000572824 POLKQ9UBT6 870 aa12.79□□□□□ -0.36
NPLOC4-210ENST00000572824 PCDH11XQ9BZA7 1347 aa12.79□□□□□ -0.36
NPLOC4-210ENST00000572824 PCDH11YQ9BZA8 1340 aa12.79□□□□□ -0.36
NPLOC4-210ENST00000572824 VIRMAQ69YN4 1812 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-210ENST00000572824 EIF4A2Q14240 407 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-210ENST00000572824 SLC27A3Q5K4L6 730 aa12.78□□□□□ -0.36
NPLOC4-210ENST00000572824 CDCA8Q53HL2 280 aa12.77□□□□□ -0.37
NPLOC4-210ENST00000572824 ZDHHC16Q969W1 377 aa12.77□□□□□ -0.37
NPLOC4-210ENST00000572824 KIF24Q5T7B8 1368 aa12.77□□□□□ -0.37
NPLOC4-210ENST00000572824 MAP3K7O43318 606 aa12.76□□□□□ -0.37
NPLOC4-210ENST00000572824 PIGBQ92521 554 aa12.76□□□□□ -0.37
NPLOC4-210ENST00000572824 PANK3Q9H999 370 aa12.76□□□□□ -0.37
NPLOC4-210ENST00000572824 CGNL1Q0VF96 1302 aa12.76□□□□□ -0.37
NPLOC4-210ENST00000572824 WASHC2AQ641Q2 1341 aa12.76□□□□□ -0.37
NPLOC4-210ENST00000572824 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
NPLOC4-210ENST00000572824 MYH14Q7Z406 1995 aaKnown RBP12.75□□□□□ -0.37
NPLOC4-210ENST00000572824 AEBP1Q8IUX7 1158 aa12.75□□□□□ -0.37
NPLOC4-210ENST00000572824 MAP3K5Q99683 1374 aa12.75□□□□□ -0.37
NPLOC4-210ENST00000572824 C4AP0C0L4 1744 aa12.74□□□□□ -0.37
NPLOC4-210ENST00000572824 KDM6AO15550 1401 aaPredicted RBP12.74□□□□□ -0.37
NPLOC4-210ENST00000572824 CLSPNQ9HAW4 1339 aa12.74□□□□□ -0.37
NPLOC4-210ENST00000572824 ST18O60284 1047 aa12.74□□□□□ -0.37
NPLOC4-210ENST00000572824 LINC00116Q8NCU8 138 aa12.74□□□□□ -0.37
NPLOC4-210ENST00000572824 CCER1Q8TC90 406 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms