RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 SH3PXD2AQ5TCZ1 1133 aa6.63□□□□□ -1.35
HMGB1P6-201ENST00000569046 RIPOR1Q6ZS17 1223 aa6.63□□□□□ -1.35
HMGB1P6-201ENST00000569046 ERICH6Q7L0X2 663 aa6.63□□□□□ -1.35
HMGB1P6-201ENST00000569046 GAS2L2Q8NHY3 880 aa6.63□□□□□ -1.35
HMGB1P6-201ENST00000569046 NIFKQ9BYG3 293 aaKnown RBP6.63□□□□□ -1.35
HMGB1P6-201ENST00000569046 GPAMQ9HCL2 828 aa6.63□□□□□ -1.35
HMGB1P6-201ENST00000569046 A0A1B0GTH6 734 aa6.62□□□□□ -1.35
HMGB1P6-201ENST00000569046 CDC14CA4D256 554 aa6.62□□□□□ -1.35
HMGB1P6-201ENST00000569046 C21orf2O43822 256 aa6.62□□□□□ -1.35
HMGB1P6-201ENST00000569046 F11P03951 625 aa6.62□□□□□ -1.35
HMGB1P6-201ENST00000569046 ATP4AP20648 1035 aa6.62□□□□□ -1.35
HMGB1P6-201ENST00000569046 MSX1P28360 303 aa6.62□□□□□ -1.35
HMGB1P6-201ENST00000569046 ZNF837Q96EG3 531 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P6-201ENST00000569046 CABP1Q9NZU7 370 aa6.62□□□□□ -1.35
HMGB1P6-201ENST00000569046 NOVA2Q9UNW9 492 aaKnown RBP6.62□□□□□ -1.35
HMGB1P6-201ENST00000569046 TXLNAP40222 546 aa6.61□□□□□ -1.35
HMGB1P6-201ENST00000569046 KRT76Q01546 638 aa6.61□□□□□ -1.35
HMGB1P6-201ENST00000569046 TRIM22Q8IYM9 498 aa6.61□□□□□ -1.35
HMGB1P6-201ENST00000569046 L3MBTL2Q969R5 705 aa6.61□□□□□ -1.35
HMGB1P6-201ENST00000569046 PBXIP1Q96AQ6 731 aa6.61□□□□□ -1.35
HMGB1P6-201ENST00000569046 RUBCNLQ9H714 662 aa6.61□□□□□ -1.35
HMGB1P6-201ENST00000569046 RBM19Q9Y4C8 960 aaKnown RBP6.61□□□□□ -1.35
HMGB1P6-201ENST00000569046 GPR25O00155 361 aa6.6□□□□□ -1.35
HMGB1P6-201ENST00000569046 ATG7O95352 703 aa6.6□□□□□ -1.35
HMGB1P6-201ENST00000569046 NOS2P35228 1153 aa6.6□□□□□ -1.35
HMGB1P6-201ENST00000569046 TEAD4Q15561 434 aa6.6□□□□□ -1.35
HMGB1P6-201ENST00000569046 SV2AQ7L0J3 742 aa6.6□□□□□ -1.35
HMGB1P6-201ENST00000569046 FAM200AQ8TCP9 573 aa6.6□□□□□ -1.35
HMGB1P6-201ENST00000569046 STK32AQ8WU08 396 aa6.6□□□□□ -1.35
HMGB1P6-201ENST00000569046 AIDAQ96BJ3 306 aa6.6□□□□□ -1.35
HMGB1P6-201ENST00000569046 HINFPQ9BQA5 517 aa6.6□□□□□ -1.35
HMGB1P6-201ENST00000569046 ATAD2Q6PL18 1390 aa6.59□□□□□ -1.35
HMGB1P6-201ENST00000569046 EML1O00423 815 aa6.59□□□□□ -1.35
HMGB1P6-201ENST00000569046 FAM69CQ0P6D2 419 aa6.59□□□□□ -1.35
HMGB1P6-201ENST00000569046 UBAP2LQ14157 1087 aaKnown RBP6.59□□□□□ -1.35
HMGB1P6-201ENST00000569046 ELOAQ14241 798 aaKnown RBP6.59□□□□□ -1.35
HMGB1P6-201ENST00000569046 RNFT1Q5M7Z0 435 aa6.59□□□□□ -1.35
HMGB1P6-201ENST00000569046 POTEAQ6S8J7 498 aa6.59□□□□□ -1.35
HMGB1P6-201ENST00000569046 SCG3Q8WXD2 468 aaKnown RBP6.59□□□□□ -1.35
HMGB1P6-201ENST00000569046 KLRG1Q96E93 195 aa6.59□□□□□ -1.35
HMGB1P6-201ENST00000569046 WIPF1O43516 503 aa6.58□□□□□ -1.36
HMGB1P6-201ENST00000569046 GAS6Q14393 721 aa6.58□□□□□ -1.36
HMGB1P6-201ENST00000569046 C7orf43Q8WVR3 580 aa6.58□□□□□ -1.36
HMGB1P6-201ENST00000569046 GTPBP3Q969Y2 492 aaKnown RBP6.58□□□□□ -1.36
HMGB1P6-201ENST00000569046 COL25A1Q9BXS0 654 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P6-201ENST00000569046 NUCKS1Q9H1E3 243 aaKnown RBP6.58□□□□□ -1.36
HMGB1P6-201ENST00000569046 CRISPLD1Q9H336 500 aa6.58□□□□□ -1.36
HMGB1P6-201ENST00000569046 SERTM1A2A2V5 107 aa6.57□□□□□ -1.36
HMGB1P6-201ENST00000569046 H7C1W4 665 aa6.57□□□□□ -1.36
HMGB1P6-201ENST00000569046 PPP1R12BO60237 982 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P6-201ENST00000569046 PSMA6P60900 246 aaKnown RBP6.57□□□□□ -1.36
HMGB1P6-201ENST00000569046 TMEM164Q5U3C3 297 aa6.57□□□□□ -1.36
HMGB1P6-201ENST00000569046 ARID3AQ99856 593 aa6.57□□□□□ -1.36
HMGB1P6-201ENST00000569046 ZDHHC3Q9NYG2 299 aa6.57□□□□□ -1.36
HMGB1P6-201ENST00000569046 ZNF232Q9UNY5 417 aa6.57□□□□□ -1.36
HMGB1P6-201ENST00000569046 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P6-201ENST00000569046 WEE1P30291 646 aa6.56□□□□□ -1.36
HMGB1P6-201ENST00000569046 NBPF1Q3BBV0 1214 aa6.56□□□□□ -1.36
HMGB1P6-201ENST00000569046 C1orf216Q8TAB5 229 aa6.56□□□□□ -1.36
HMGB1P6-201ENST00000569046 CHMP7Q8WUX9 453 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P6-201ENST00000569046 GMCL1Q96IK5 515 aa6.56□□□□□ -1.36
HMGB1P6-201ENST00000569046 CNTNAP3BQ96NU0 1288 aa6.56□□□□□ -1.36
HMGB1P6-201ENST00000569046 ZIC5Q96T25 663 aa6.56□□□□□ -1.36
HMGB1P6-201ENST00000569046 C2orf49Q9BVC5 232 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P6-201ENST00000569046 CNTNAP3Q9BZ76 1288 aa6.56□□□□□ -1.36
HMGB1P6-201ENST00000569046 SLAIN2Q9P270 581 aa6.56□□□□□ -1.36
HMGB1P6-201ENST00000569046 HCN4Q9Y3Q4 1203 aa6.56□□□□□ -1.36
HMGB1P6-201ENST00000569046 ACIN1Q9UKV3 1341 aaKnown RBP6.55□□□□□ -1.36
HMGB1P6-201ENST00000569046 A0A1W2PNR3 127 aa6.55□□□□□ -1.36
HMGB1P6-201ENST00000569046 CSB-PGBD3P0DP91 1061 aa6.55□□□□□ -1.36
HMGB1P6-201ENST00000569046 HIRAP54198 1017 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P6-201ENST00000569046 ARSJQ5FYB0 599 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P6-201ENST00000569046 PGBD3Q8N328 593 aa6.55□□□□□ -1.36
HMGB1P6-201ENST00000569046 HCN2Q9UL51 889 aa6.55□□□□□ -1.36
HMGB1P6-201ENST00000569046 TATP17735 454 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P6-201ENST00000569046 IGFBP4P22692 258 aa6.54□□□□□ -1.36
HMGB1P6-201ENST00000569046 OCLNQ16625 522 aa6.54□□□□□ -1.36
HMGB1P6-201ENST00000569046 STAG2Q8N3U4 1231 aa6.54□□□□□ -1.36
HMGB1P6-201ENST00000569046 PRIMPOLQ96LW4 560 aa6.54□□□□□ -1.36
HMGB1P6-201ENST00000569046 PHACTR1Q9C0D0 580 aa6.54□□□□□ -1.36
HMGB1P6-201ENST00000569046 NDFIP2Q9NV92 336 aa6.54□□□□□ -1.36
HMGB1P6-201ENST00000569046 PRMT3O60678 531 aa6.53□□□□□ -1.36
HMGB1P6-201ENST00000569046 PPP1R15AO75807 674 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P6-201ENST00000569046 LBRQ14739 615 aaKnown RBP6.53□□□□□ -1.36
HMGB1P6-201ENST00000569046 SWI5Q1ZZU3 235 aa6.53□□□□□ -1.36
HMGB1P6-201ENST00000569046 EFHC2Q5JST6 749 aa6.53□□□□□ -1.36
HMGB1P6-201ENST00000569046 BICDL1Q6ZP65 573 aa6.53□□□□□ -1.36
HMGB1P6-201ENST00000569046 ZCCHC2Q9C0B9 1178 aaKnown RBP6.53□□□□□ -1.36
HMGB1P6-201ENST00000569046 CARNS1A5YM72 827 aa6.52□□□□□ -1.37
HMGB1P6-201ENST00000569046 BNIP3LO60238 219 aa6.52□□□□□ -1.37
HMGB1P6-201ENST00000569046 FKBP5Q13451 457 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P6-201ENST00000569046 LRRC69Q6ZNQ3 347 aa6.52□□□□□ -1.37
HMGB1P6-201ENST00000569046 NLRP8Q86W28 1048 aa6.52□□□□□ -1.37
HMGB1P6-201ENST00000569046 ALDH16A1Q8IZ83 802 aa6.52□□□□□ -1.37
HMGB1P6-201ENST00000569046 ABHD17AQ96GS6 310 aa6.52□□□□□ -1.37
HMGB1P6-201ENST00000569046 NGLY1Q96IV0 654 aa6.52□□□□□ -1.37
HMGB1P6-201ENST00000569046 HSH2DQ96JZ2 352 aa6.52□□□□□ -1.37
HMGB1P6-201ENST00000569046 CHMP3Q9Y3E7 222 aa6.52□□□□□ -1.37
HMGB1P6-201ENST00000569046 TMEM88BA6NKF7 163 aa6.51□□□□□ -1.37
HMGB1P6-201ENST00000569046 C1orf53Q5VUE5 145 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms