RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 GMPR2Q9P2T1 348 aaKnown RBP9.01□□□□□ -0.97
SHCBP1-206ENST00000567698 SENP3-EIF4A1A0A087X0R7 540 aa9□□□□□ -0.97
SHCBP1-206ENST00000567698 SOBPA7XYQ1 873 aa9□□□□□ -0.97
SHCBP1-206ENST00000567698 NOS2P35228 1153 aa9□□□□□ -0.97
SHCBP1-206ENST00000567698 SLC27A3Q5K4L6 730 aa9□□□□□ -0.97
SHCBP1-206ENST00000567698 Q6ZNB5 142 aa9□□□□□ -0.97
SHCBP1-206ENST00000567698 LYSMD3Q7Z3D4 306 aa9□□□□□ -0.97
SHCBP1-206ENST00000567698 PRICKLE2Q7Z3G6 844 aa9□□□□□ -0.97
SHCBP1-206ENST00000567698 COL26A1Q96A83 441 aa9□□□□□ -0.97
SHCBP1-206ENST00000567698 TRIM47Q96LD4 638 aa9□□□□□ -0.97
SHCBP1-206ENST00000567698 GNEQ9Y223 722 aaKnown RBP9□□□□□ -0.97
SHCBP1-206ENST00000567698 PARP3Q9Y6F1 533 aa9□□□□□ -0.97
SHCBP1-206ENST00000567698 KCNA1Q09470 495 aa8.99□□□□□ -0.97
SHCBP1-206ENST00000567698 TMEM214Q6NUQ4 689 aaKnown RBP8.99□□□□□ -0.97
SHCBP1-206ENST00000567698 L3MBTL2Q969R5 705 aa8.99□□□□□ -0.97
SHCBP1-206ENST00000567698 KLRG1Q96E93 195 aa8.99□□□□□ -0.97
SHCBP1-206ENST00000567698 NIFKQ9BYG3 293 aaKnown RBP8.99□□□□□ -0.97
SHCBP1-206ENST00000567698 SEPT3Q9UH03 358 aa8.99□□□□□ -0.97
SHCBP1-206ENST00000567698 POTECB2RU33 542 aa8.98□□□□□ -0.97
SHCBP1-206ENST00000567698 RHOQP17081 205 aa8.98□□□□□ -0.97
SHCBP1-206ENST00000567698 TXLNAP40222 546 aa8.98□□□□□ -0.97
SHCBP1-206ENST00000567698 WDR44Q5JSH3 913 aa8.98□□□□□ -0.97
SHCBP1-206ENST00000567698 B4GALNT3Q6L9W6 998 aa8.98□□□□□ -0.97
SHCBP1-206ENST00000567698 KCTD17Q8N5Z5 321 aa8.98□□□□□ -0.97
SHCBP1-206ENST00000567698 MKNK1Q9BUB5 465 aa8.98□□□□□ -0.97
SHCBP1-206ENST00000567698 QTRT2Q9H974 415 aaKnown RBP8.98□□□□□ -0.97
SHCBP1-206ENST00000567698 CABP1Q9NZU7 370 aa8.98□□□□□ -0.97
SHCBP1-206ENST00000567698 SERTM1A2A2V5 107 aa8.97□□□□□ -0.97
SHCBP1-206ENST00000567698 SNRPBP14678 240 aaKnown RBP8.97□□□□□ -0.97
SHCBP1-206ENST00000567698 ATP4AP20648 1035 aa8.97□□□□□ -0.97
SHCBP1-206ENST00000567698 PLA2G4AP47712 749 aa8.97□□□□□ -0.97
SHCBP1-206ENST00000567698 TRIM26Q12899 539 aaPredicted RBP8.97□□□□□ -0.97
SHCBP1-206ENST00000567698 CHMP7Q8WUX9 453 aaPredicted RBP8.97□□□□□ -0.97
SHCBP1-206ENST00000567698 SAP130Q9H0E3 1048 aa8.97□□□□□ -0.97
SHCBP1-206ENST00000567698 PHKA2P46019 1235 aa8.96□□□□□ -0.98
SHCBP1-206ENST00000567698 GNASQ5JWF2 1037 aa8.96□□□□□ -0.98
SHCBP1-206ENST00000567698 AEBP1Q8IUX7 1158 aa8.96□□□□□ -0.98
SHCBP1-206ENST00000567698 SERPINB4P48594 390 aa8.95□□□□□ -0.98
SHCBP1-206ENST00000567698 LRFN2Q9ULH4 789 aa8.95□□□□□ -0.98
SHCBP1-206ENST00000567698 ARID4AP29374 1257 aaPredicted RBP8.94□□□□□ -0.98
SHCBP1-206ENST00000567698 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.94□□□□□ -0.98
SHCBP1-206ENST00000567698 MYO19Q96H55 970 aa8.94□□□□□ -0.98
SHCBP1-206ENST00000567698 SENP2Q9HC62 589 aa8.94□□□□□ -0.98
SHCBP1-206ENST00000567698 HCN4Q9Y3Q4 1203 aa8.94□□□□□ -0.98
SHCBP1-206ENST00000567698 IVNS1ABPQ9Y6Y0 642 aa8.94□□□□□ -0.98
SHCBP1-206ENST00000567698 SLC35F4A4IF30 521 aa8.93□□□□□ -0.98
SHCBP1-206ENST00000567698 TNFRSF10BO14763 440 aa8.93□□□□□ -0.98
SHCBP1-206ENST00000567698 PTCD1O75127 700 aaKnown RBP8.93□□□□□ -0.98
SHCBP1-206ENST00000567698 THBS1P07996 1170 aa8.93□□□□□ -0.98
SHCBP1-206ENST00000567698 ECM1Q16610 540 aa8.93□□□□□ -0.98
SHCBP1-206ENST00000567698 FAM26DQ5JW98 314 aa8.93□□□□□ -0.98
SHCBP1-206ENST00000567698 COX20Q5RI15 118 aa8.93□□□□□ -0.98
SHCBP1-206ENST00000567698 ALDH16A1Q8IZ83 802 aa8.93□□□□□ -0.98
SHCBP1-206ENST00000567698 KIFC2Q96AC6 838 aa8.93□□□□□ -0.98
SHCBP1-206ENST00000567698 PHACTR1Q9C0D0 580 aa8.93□□□□□ -0.98
SHCBP1-206ENST00000567698 ZDHHC3Q9NYG2 299 aa8.93□□□□□ -0.98
SHCBP1-206ENST00000567698 DNMT3AQ9Y6K1 912 aaPredicted RBP8.93□□□□□ -0.98
SHCBP1-206ENST00000567698 MAN1A2O60476 641 aa8.92□□□□□ -0.98
SHCBP1-206ENST00000567698 NAA30Q147X3 362 aaPredicted RBP8.92□□□□□ -0.98
SHCBP1-206ENST00000567698 C1orf53Q5VUE5 145 aa8.92□□□□□ -0.98
SHCBP1-206ENST00000567698 GTF3C2Q8WUA4 911 aaPredicted RBP8.92□□□□□ -0.98
SHCBP1-206ENST00000567698 TIMMDC1Q9NPL8 285 aa8.92□□□□□ -0.98
SHCBP1-206ENST00000567698 ZNF232Q9UNY5 417 aa8.92□□□□□ -0.98
SHCBP1-206ENST00000567698 MSX1P28360 303 aa8.91□□□□□ -0.98
SHCBP1-206ENST00000567698 GTF2E1P29083 439 aaPredicted RBP8.91□□□□□ -0.98
SHCBP1-206ENST00000567698 PTSQ03393 145 aa8.91□□□□□ -0.98
SHCBP1-206ENST00000567698 BCS1LQ9Y276 419 aa8.91□□□□□ -0.98
SHCBP1-206ENST00000567698 DYRK1BQ9Y463 629 aa8.91□□□□□ -0.98
SHCBP1-206ENST00000567698 A0A1B0GTH6 734 aa8.9□□□□□ -0.98
SHCBP1-206ENST00000567698 MTMR3Q13615 1198 aa8.9□□□□□ -0.98
SHCBP1-206ENST00000567698 RTN1Q16799 776 aa8.9□□□□□ -0.98
SHCBP1-206ENST00000567698 ZNF211Q13398 564 aaPredicted RBP8.89□□□□□ -0.99
SHCBP1-206ENST00000567698 C16orf46Q6P387 395 aa8.89□□□□□ -0.99
SHCBP1-206ENST00000567698 HELQQ8TDG4 1101 aa8.89□□□□□ -0.99
SHCBP1-206ENST00000567698 NGLY1Q96IV0 654 aa8.89□□□□□ -0.99
SHCBP1-206ENST00000567698 ZIC5Q96T25 663 aa8.89□□□□□ -0.99
SHCBP1-206ENST00000567698 CUEDC1Q9NWM3 386 aaPredicted RBP8.89□□□□□ -0.99
SHCBP1-206ENST00000567698 EGFL7Q9UHF1 273 aa8.89□□□□□ -0.99
SHCBP1-206ENST00000567698 SOWAHDA6NJG2 315 aa8.88□□□□□ -0.99
SHCBP1-206ENST00000567698 NPR3P17342 541 aa8.88□□□□□ -0.99
SHCBP1-206ENST00000567698 UBAP2LQ14157 1087 aaKnown RBP8.88□□□□□ -0.99
SHCBP1-206ENST00000567698 CCER1Q8TC90 406 aaPredicted RBP8.88□□□□□ -0.99
SHCBP1-206ENST00000567698 CRISPLD1Q9H336 500 aa8.88□□□□□ -0.99
SHCBP1-206ENST00000567698 CHMP3Q9Y3E7 222 aa8.88□□□□□ -0.99
SHCBP1-206ENST00000567698 PATL2C9JE40 543 aaKnown RBP8.87□□□□□ -0.99
SHCBP1-206ENST00000567698 C11orf95C9JLR9 678 aaPredicted RBP8.87□□□□□ -0.99
SHCBP1-206ENST00000567698 ICMTO60725 284 aa8.87□□□□□ -0.99
SHCBP1-206ENST00000567698 NBPF1Q3BBV0 1214 aa8.87□□□□□ -0.99
SHCBP1-206ENST00000567698 VTI1AQ96AJ9 217 aa8.87□□□□□ -0.99
SHCBP1-206ENST00000567698 AIDAQ96BJ3 306 aa8.87□□□□□ -0.99
SHCBP1-206ENST00000567698 KLK14Q9P0G3 267 aa8.87□□□□□ -0.99
SHCBP1-206ENST00000567698 DMGDHQ9UI17 866 aaKnown RBP8.87□□□□□ -0.99
SHCBP1-206ENST00000567698 F11P03951 625 aa8.86□□□□□ -0.99
SHCBP1-206ENST00000567698 CCDC155Q8N6L0 562 aa8.86□□□□□ -0.99
SHCBP1-206ENST00000567698 ZNF280CQ8ND82 737 aa8.86□□□□□ -0.99
SHCBP1-206ENST00000567698 GPAMQ9HCL2 828 aa8.86□□□□□ -0.99
SHCBP1-206ENST00000567698 ANO2Q9NQ90 1003 aa8.86□□□□□ -0.99
SHCBP1-206ENST00000567698 GPC6Q9Y625 555 aaPredicted RBP8.86□□□□□ -0.99
SHCBP1-206ENST00000567698 ZBTB39O15060 712 aa8.85□□□□□ -0.99
SHCBP1-206ENST00000567698 DGKZQ13574 1117 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms