RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 NOS2P35228 1153 aa9.77□□□□□ -0.85
MARK3-220ENST00000560417 SAP130Q9H0E3 1048 aa9.77□□□□□ -0.85
MARK3-220ENST00000560417 TUT1Q9H6E5 874 aaKnown RBP9.77□□□□□ -0.85
MARK3-220ENST00000560417 QTRT2Q9H974 415 aaKnown RBP9.77□□□□□ -0.85
MARK3-220ENST00000560417 ANO2Q9NQ90 1003 aa9.77□□□□□ -0.85
MARK3-220ENST00000560417 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.77□□□□□ -0.854e-8■■■■■ 32.6
MARK3-220ENST00000560417 SERTM1A2A2V5 107 aa9.76□□□□□ -0.85
MARK3-220ENST00000560417 MTMR3Q13615 1198 aa9.76□□□□□ -0.85
MARK3-220ENST00000560417 SH3PXD2AQ5TCZ1 1133 aa9.76□□□□□ -0.85
MARK3-220ENST00000560417 FOXD4L5Q5VV16 416 aaPredicted RBP9.76□□□□□ -0.85
MARK3-220ENST00000560417 C16orf46Q6P387 395 aa9.76□□□□□ -0.85
MARK3-220ENST00000560417 RHBDD1Q8TEB9 315 aa9.76□□□□□ -0.85
MARK3-220ENST00000560417 VTI1AQ96AJ9 217 aa9.76□□□□□ -0.85
MARK3-220ENST00000560417 MYO19Q96H55 970 aa9.76□□□□□ -0.85
MARK3-220ENST00000560417 INSM2Q96T92 566 aaPredicted RBP9.76□□□□□ -0.85
MARK3-220ENST00000560417 COX20Q5RI15 118 aa9.75□□□□□ -0.85
MARK3-220ENST00000560417 DNAJC14Q6Y2X3 702 aaPredicted RBP9.75□□□□□ -0.85
MARK3-220ENST00000560417 GLYCTKQ8IVS8 523 aa9.75□□□□□ -0.85
MARK3-220ENST00000560417 CABP1Q9NZU7 370 aa9.75□□□□□ -0.85
MARK3-220ENST00000560417 CHMP3Q9Y3E7 222 aa9.75□□□□□ -0.85
MARK3-220ENST00000560417 CTSOP43234 321 aaPredicted RBP9.74□□□□□ -0.85
MARK3-220ENST00000560417 ARHGAP4P98171 946 aa9.74□□□□□ -0.85
MARK3-220ENST00000560417 NOM1Q5C9Z4 860 aaKnown RBP9.74□□□□□ -0.85
MARK3-220ENST00000560417 L3MBTL2Q969R5 705 aa9.74□□□□□ -0.85
MARK3-220ENST00000560417 NIFKQ9BYG3 293 aaKnown RBP9.74□□□□□ -0.85
MARK3-220ENST00000560417 LRFN2Q9ULH4 789 aa9.74□□□□□ -0.85
MARK3-220ENST00000560417 SPATA31C2B4DYI2 1134 aa9.73□□□□□ -0.85
MARK3-220ENST00000560417 TNFRSF10BO14763 440 aa9.73□□□□□ -0.85
MARK3-220ENST00000560417 SMCPP49901 116 aaPredicted RBP9.73□□□□□ -0.85
MARK3-220ENST00000560417 TMEM214Q6NUQ4 689 aaKnown RBP9.73□□□□□ -0.85
MARK3-220ENST00000560417 MRPL14Q6P1L8 145 aaKnown RBP9.73□□□□□ -0.85
MARK3-220ENST00000560417 BIN2Q9UBW5 565 aaPredicted RBP9.73□□□□□ -0.85
MARK3-220ENST00000560417 FAM187AA6NFU0 413 aa9.72□□□□□ -0.85
MARK3-220ENST00000560417 ALDH16A1Q8IZ83 802 aa9.72□□□□□ -0.85
MARK3-220ENST00000560417 PARP3Q9Y6F1 533 aa9.72□□□□□ -0.85
MARK3-220ENST00000560417 UPP2O95045 317 aa9.71□□□□□ -0.86
MARK3-220ENST00000560417 C4orf17Q53FE4 359 aa9.71□□□□□ -0.86
MARK3-220ENST00000560417 SLC27A3Q5K4L6 730 aa9.71□□□□□ -0.86
MARK3-220ENST00000560417 POLMQ9NP87 494 aaPredicted RBP9.71□□□□□ -0.86
MARK3-220ENST00000560417 ZNF232Q9UNY5 417 aa9.71□□□□□ -0.86
MARK3-220ENST00000560417 FAM13AO94988 1023 aa9.7□□□□□ -0.86
MARK3-220ENST00000560417 MARSP56192 900 aaKnown RBP9.7□□□□□ -0.86
MARK3-220ENST00000560417 RTN1Q16799 776 aa9.7□□□□□ -0.86
MARK3-220ENST00000560417 CTC1Q2NKJ3 1217 aa9.7□□□□□ -0.86
MARK3-220ENST00000560417 C1orf53Q5VUE5 145 aa9.7□□□□□ -0.86
MARK3-220ENST00000560417 RNF217Q8TC41 542 aa9.7□□□□□ -0.86
MARK3-220ENST00000560417 C7orf43Q8WVR3 580 aa9.7□□□□□ -0.86
MARK3-220ENST00000560417 FOXD4L4Q8WXT5 416 aaPredicted RBP9.7□□□□□ -0.86
MARK3-220ENST00000560417 HCN4Q9Y3Q4 1203 aa9.7□□□□□ -0.86
MARK3-220ENST00000560417 DGAT1O75907 488 aa9.69□□□□□ -0.86
MARK3-220ENST00000560417 BMP2P12643 396 aa9.69□□□□□ -0.86
MARK3-220ENST00000560417 ERCC3P19447 782 aa9.69□□□□□ -0.86
MARK3-220ENST00000560417 MPSTP25325 297 aa9.69□□□□□ -0.86
MARK3-220ENST00000560417 GTF2E1P29083 439 aaPredicted RBP9.69□□□□□ -0.86
MARK3-220ENST00000560417 GNASQ5JWF2 1037 aa9.69□□□□□ -0.86
MARK3-220ENST00000560417 TRIM46Q7Z4K8 759 aa9.69□□□□□ -0.86
MARK3-220ENST00000560417 CRIPAKQ8N1N5 446 aa9.69□□□□□ -0.86
MARK3-220ENST00000560417 PHACTR1Q9C0D0 580 aa9.69□□□□□ -0.86
MARK3-220ENST00000560417 STIM2Q9P246 746 aa9.69□□□□□ -0.86
MARK3-220ENST00000560417 TXLNAP40222 546 aa9.68□□□□□ -0.86
MARK3-220ENST00000560417 WDR44Q5JSH3 913 aa9.68□□□□□ -0.86
MARK3-220ENST00000560417 FAM26DQ5JW98 314 aa9.68□□□□□ -0.86
MARK3-220ENST00000560417 C6orf118Q5T5N4 469 aa9.68□□□□□ -0.86
MARK3-220ENST00000560417 NGLY1Q96IV0 654 aa9.68□□□□□ -0.86
MARK3-220ENST00000560417 AMOTL2Q9Y2J4 779 aa9.68□□□□□ -0.86
MARK3-220ENST00000560417 NRG2O14511 850 aaPredicted RBP9.67□□□□□ -0.86
MARK3-220ENST00000560417 ZDHHC3Q9NYG2 299 aa9.67□□□□□ -0.86
MARK3-220ENST00000560417 DCTN4Q9UJW0 460 aa9.67□□□□□ -0.86
MARK3-220ENST00000560417 SOS2Q07890 1332 aaPredicted RBP9.66□□□□□ -0.86
MARK3-220ENST00000560417 BMP1P13497 986 aa9.66□□□□□ -0.86
MARK3-220ENST00000560417 PLA2G4AP47712 749 aa9.66□□□□□ -0.86
MARK3-220ENST00000560417 C11orf91Q3C1V1 193 aa9.66□□□□□ -0.86
MARK3-220ENST00000560417 NBPF10Q6P3W6 841 aaKnown RBP9.66□□□□□ -0.86
MARK3-220ENST00000560417 NPM2Q86SE8 214 aaKnown RBP9.66□□□□□ -0.86
MARK3-220ENST00000560417 TTLL8A6PVC2 850 aa9.65□□□□□ -0.86
MARK3-220ENST00000560417 GFRA3O60609 400 aa9.65□□□□□ -0.86
MARK3-220ENST00000560417 BRD2P25440 801 aaKnown RBP9.65□□□□□ -0.86
MARK3-220ENST00000560417 EIF1AXP47813 144 aaKnown RBP9.65□□□□□ -0.86
MARK3-220ENST00000560417 POU4F2Q12837 409 aa9.65□□□□□ -0.86
MARK3-220ENST00000560417 SCARF1Q14162 830 aa9.65□□□□□ -0.86
MARK3-220ENST00000560417 LYSMD3Q7Z3D4 306 aa9.65□□□□□ -0.86
MARK3-220ENST00000560417 ZBTB39O15060 712 aa9.64□□□□□ -0.87
MARK3-220ENST00000560417 DGKZQ13574 1117 aa9.64□□□□□ -0.87
MARK3-220ENST00000560417 PKDCCQ504Y2 493 aa9.64□□□□□ -0.87
MARK3-220ENST00000560417 PRICKLE2Q7Z3G6 844 aa9.64□□□□□ -0.87
MARK3-220ENST00000560417 ETFBKMTQ8IXQ9 262 aa9.64□□□□□ -0.87
MARK3-220ENST00000560417 ABTB2Q8N961 1025 aa9.64□□□□□ -0.87
MARK3-220ENST00000560417 ASB16Q96NS5 453 aa9.64□□□□□ -0.87
MARK3-220ENST00000560417 KLK14Q9P0G3 267 aa9.64□□□□□ -0.87
MARK3-220ENST00000560417 FZD6O60353 706 aa9.63□□□□□ -0.87
MARK3-220ENST00000560417 PHKA2P46019 1235 aa9.63□□□□□ -0.87
MARK3-220ENST00000560417 NBPF1Q3BBV0 1214 aa9.63□□□□□ -0.87
MARK3-220ENST00000560417 ALKBH2Q6NS38 261 aa9.63□□□□□ -0.87
MARK3-220ENST00000560417 NPAS4Q8IUM7 802 aa9.63□□□□□ -0.87
MARK3-220ENST00000560417 ZFP42Q96MM3 310 aa9.63□□□□□ -0.87
MARK3-220ENST00000560417 RBCK1Q9BYM8 510 aa9.63□□□□□ -0.87
MARK3-220ENST00000560417 BCS1LQ9Y276 419 aa9.63□□□□□ -0.87
MARK3-220ENST00000560417 AXIN1O15169 862 aa9.62□□□□□ -0.87
MARK3-220ENST00000560417 ATP4AP20648 1035 aa9.62□□□□□ -0.87
MARK3-220ENST00000560417 MAPK1P28482 360 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms