RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 ANKMY2Q8IV38 441 aa10.14□□□□□ -0.79
GPHN-215ENST00000557654 GAS2L2Q8NHY3 880 aa10.14□□□□□ -0.79
GPHN-215ENST00000557654 AIDAQ96BJ3 306 aa10.14□□□□□ -0.79
GPHN-215ENST00000557654 RUBCNLQ9H714 662 aa10.14□□□□□ -0.79
GPHN-215ENST00000557654 SERPINA10Q9UK55 444 aa10.14□□□□□ -0.79
GPHN-215ENST00000557654 RBM19Q9Y4C8 960 aaKnown RBP10.14□□□□□ -0.79
GPHN-215ENST00000557654 A0A1B0GTH6 734 aa10.13□□□□□ -0.79
GPHN-215ENST00000557654 GPR25O00155 361 aa10.13□□□□□ -0.79
GPHN-215ENST00000557654 SUPT5HO00267 1087 aaKnown RBP10.13□□□□□ -0.79
GPHN-215ENST00000557654 SRPK2P78362 688 aaKnown RBP10.13□□□□□ -0.79
GPHN-215ENST00000557654 SH3PXD2AQ5TCZ1 1133 aa10.13□□□□□ -0.79
GPHN-215ENST00000557654 TRIM22Q8IYM9 498 aa10.13□□□□□ -0.79
GPHN-215ENST00000557654 ARXQ96QS3 562 aa10.13□□□□□ -0.79
GPHN-215ENST00000557654 KRT76Q01546 638 aa10.12□□□□□ -0.79
GPHN-215ENST00000557654 WIPF1O43516 503 aa10.11□□□□□ -0.79
GPHN-215ENST00000557654 ATP4AP20648 1035 aa10.11□□□□□ -0.79
GPHN-215ENST00000557654 RNFT1Q5M7Z0 435 aa10.11□□□□□ -0.79
GPHN-215ENST00000557654 GTPBP3Q969Y2 492 aaKnown RBP10.11□□□□□ -0.79
GPHN-215ENST00000557654 COL25A1Q9BXS0 654 aaPredicted RBP10.11□□□□□ -0.79
GPHN-215ENST00000557654 M0R2N6 131 aa10.1□□□□□ -0.79
GPHN-215ENST00000557654 TXLNAP40222 546 aa10.1□□□□□ -0.79
GPHN-215ENST00000557654 L3MBTL2Q969R5 705 aa10.1□□□□□ -0.79
GPHN-215ENST00000557654 HINFPQ9BQA5 517 aa10.1□□□□□ -0.79
GPHN-215ENST00000557654 NUCKS1Q9H1E3 243 aaKnown RBP10.1□□□□□ -0.79
GPHN-215ENST00000557654 NOVA2Q9UNW9 492 aaKnown RBP10.1□□□□□ -0.79
GPHN-215ENST00000557654 C21orf2O43822 256 aa10.09□□□□□ -0.79
GPHN-215ENST00000557654 CNTNAP3BQ96NU0 1288 aa10.09□□□□□ -0.79
GPHN-215ENST00000557654 CNTNAP3Q9BZ76 1288 aa10.09□□□□□ -0.79
GPHN-215ENST00000557654 ZMIZ1Q9ULJ6 1067 aa10.09□□□□□ -0.79
GPHN-215ENST00000557654 ZNF232Q9UNY5 417 aa10.09□□□□□ -0.79
GPHN-215ENST00000557654 NOS2P35228 1153 aa10.08□□□□□ -0.8
GPHN-215ENST00000557654 TEAD4Q15561 434 aa10.08□□□□□ -0.8
GPHN-215ENST00000557654 STK32AQ8WU08 396 aa10.08□□□□□ -0.8
GPHN-215ENST00000557654 SCG3Q8WXD2 468 aaKnown RBP10.08□□□□□ -0.8
GPHN-215ENST00000557654 H7C1W4 665 aa10.07□□□□□ -0.8
GPHN-215ENST00000557654 GAS6Q14393 721 aa10.07□□□□□ -0.8
GPHN-215ENST00000557654 FAM200AQ8TCP9 573 aa10.07□□□□□ -0.8
GPHN-215ENST00000557654 KLRG1Q96E93 195 aa10.07□□□□□ -0.8
GPHN-215ENST00000557654 SERTM1A2A2V5 107 aa10.06□□□□□ -0.8
GPHN-215ENST00000557654 EML1O00423 815 aa10.06□□□□□ -0.8
GPHN-215ENST00000557654 PPP1R12BO60237 982 aaPredicted RBP10.06□□□□□ -0.8
GPHN-215ENST00000557654 CSB-PGBD3P0DP91 1061 aa10.06□□□□□ -0.8
GPHN-215ENST00000557654 PSMA6P60900 246 aaKnown RBP10.06□□□□□ -0.8
GPHN-215ENST00000557654 NBPF1Q3BBV0 1214 aa10.06□□□□□ -0.8
GPHN-215ENST00000557654 PGBD3Q8N328 593 aa10.06□□□□□ -0.8
GPHN-215ENST00000557654 CHMP7Q8WUX9 453 aaPredicted RBP10.06□□□□□ -0.8
GPHN-215ENST00000557654 PBXIP1Q96AQ6 731 aa10.06□□□□□ -0.8
GPHN-215ENST00000557654 ATAD2Q6PL18 1390 aa10.05□□□□□ -0.8
GPHN-215ENST00000557654 UBAP2LQ14157 1087 aaKnown RBP10.05□□□□□ -0.8
GPHN-215ENST00000557654 ARSJQ5FYB0 599 aaPredicted RBP10.05□□□□□ -0.8
GPHN-215ENST00000557654 HCN4Q9Y3Q4 1203 aa10.05□□□□□ -0.8
GPHN-215ENST00000557654 TATP17735 454 aaPredicted RBP10.04□□□□□ -0.8
GPHN-215ENST00000557654 GMCL1Q96IK5 515 aa10.04□□□□□ -0.8
GPHN-215ENST00000557654 CRISPLD1Q9H336 500 aa10.04□□□□□ -0.8
GPHN-215ENST00000557654 ZDHHC3Q9NYG2 299 aa10.04□□□□□ -0.8
GPHN-215ENST00000557654 A0A1W2PNR3 127 aa10.03□□□□□ -0.8
GPHN-215ENST00000557654 ATG7O95352 703 aa10.03□□□□□ -0.8
GPHN-215ENST00000557654 LORP23490 312 aaPredicted RBP10.03□□□□□ -0.8
GPHN-215ENST00000557654 EFHC2Q5JST6 749 aa10.03□□□□□ -0.8
GPHN-215ENST00000557654 ERICH6Q7L0X2 663 aa10.03□□□□□ -0.8
GPHN-215ENST00000557654 ZIC5Q96T25 663 aa10.03□□□□□ -0.8
GPHN-215ENST00000557654 ARID3AQ99856 593 aa10.03□□□□□ -0.8
GPHN-215ENST00000557654 TMEM164Q5U3C3 297 aa10.02□□□□□ -0.81
GPHN-215ENST00000557654 BICDL1Q6ZP65 573 aa10.02□□□□□ -0.81
GPHN-215ENST00000557654 C1orf216Q8TAB5 229 aa10.02□□□□□ -0.81
GPHN-215ENST00000557654 ELOAQ14241 798 aaKnown RBP10.01□□□□□ -0.81
GPHN-215ENST00000557654 FOXR1Q6PIV2 292 aa10.01□□□□□ -0.81
GPHN-215ENST00000557654 PRIMPOLQ96LW4 560 aa10.01□□□□□ -0.81
GPHN-215ENST00000557654 C2orf49Q9BVC5 232 aaPredicted RBP10.01□□□□□ -0.81
GPHN-215ENST00000557654 PHACTR1Q9C0D0 580 aa10.01□□□□□ -0.81
GPHN-215ENST00000557654 FAM69CQ0P6D2 419 aa10□□□□□ -0.81
GPHN-215ENST00000557654 POTEAQ6S8J7 498 aa10□□□□□ -0.81
GPHN-215ENST00000557654 C7orf43Q8WVR3 580 aa10□□□□□ -0.81
GPHN-215ENST00000557654 ABHD17AQ96GS6 310 aa10□□□□□ -0.81
GPHN-215ENST00000557654 NGLY1Q96IV0 654 aa10□□□□□ -0.81
GPHN-215ENST00000557654 TRERF1Q96PN7 1200 aa10□□□□□ -0.81
GPHN-215ENST00000557654 ZCCHC2Q9C0B9 1178 aaKnown RBP10□□□□□ -0.81
GPHN-215ENST00000557654 CHMP3Q9Y3E7 222 aa10□□□□□ -0.81
GPHN-215ENST00000557654 BNIP3LO60238 219 aa9.99□□□□□ -0.81
GPHN-215ENST00000557654 PRMT3O60678 531 aa9.99□□□□□ -0.81
GPHN-215ENST00000557654 IGFBP4P22692 258 aa9.99□□□□□ -0.81
GPHN-215ENST00000557654 INSM1Q01101 510 aaPredicted RBP9.99□□□□□ -0.81
GPHN-215ENST00000557654 LBRQ14739 615 aaKnown RBP9.99□□□□□ -0.81
GPHN-215ENST00000557654 HCN2Q9UL51 889 aa9.99□□□□□ -0.81
GPHN-215ENST00000557654 WEE1P30291 646 aa9.98□□□□□ -0.81
GPHN-215ENST00000557654 HIRAP54198 1017 aaPredicted RBP9.98□□□□□ -0.81
GPHN-215ENST00000557654 LRRC69Q6ZNQ3 347 aa9.98□□□□□ -0.81
GPHN-215ENST00000557654 RHPN1Q8TCX5 695 aa9.98□□□□□ -0.81
GPHN-215ENST00000557654 ACIN1Q9UKV3 1341 aaKnown RBP9.98□□□□□ -0.81
GPHN-215ENST00000557654 DCDC2BA2VCK2 349 aa9.97□□□□□ -0.81
GPHN-215ENST00000557654 NLRP8Q86W28 1048 aa9.97□□□□□ -0.81
GPHN-215ENST00000557654 ALDH16A1Q8IZ83 802 aa9.97□□□□□ -0.81
GPHN-215ENST00000557654 ZSCAN1Q8NBB4 408 aa9.97□□□□□ -0.81
GPHN-215ENST00000557654 HSH2DQ96JZ2 352 aa9.97□□□□□ -0.81
GPHN-215ENST00000557654 NDFIP2Q9NV92 336 aa9.97□□□□□ -0.81
GPHN-215ENST00000557654 GJA3Q9Y6H8 435 aa9.97□□□□□ -0.81
GPHN-215ENST00000557654 ATXN7O15265 892 aaPredicted RBP9.96□□□□□ -0.82
GPHN-215ENST00000557654 ADAMTS2O95450 1211 aa9.96□□□□□ -0.82
GPHN-215ENST00000557654 STAG2Q8N3U4 1231 aa9.96□□□□□ -0.82
GPHN-215ENST00000557654 WHAMMQ8TF30 809 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms