RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 KLRG1Q96E93 195 aa9.38□□□□□ -0.91
VRK1-207ENST00000557352 OXCT2Q9BYC2 517 aaPredicted RBP9.38□□□□□ -0.91
VRK1-207ENST00000557352 NDFIP2Q9NV92 336 aa9.38□□□□□ -0.91
VRK1-207ENST00000557352 CABP1Q9NZU7 370 aa9.38□□□□□ -0.91
VRK1-207ENST00000557352 SCHIP1Q9P0W5 487 aaPredicted RBP9.38□□□□□ -0.91
VRK1-207ENST00000557352 ZBTB7BO15156 539 aaPredicted RBP9.37□□□□□ -0.91
VRK1-207ENST00000557352 BNIP3LO60238 219 aa9.37□□□□□ -0.91
VRK1-207ENST00000557352 C1orf229Q6ZS94 237 aaPredicted RBP9.37□□□□□ -0.91
VRK1-207ENST00000557352 GLMNQ92990 594 aa9.37□□□□□ -0.91
VRK1-207ENST00000557352 DNAAF2Q9NVR5 837 aaKnown RBP9.37□□□□□ -0.91
VRK1-207ENST00000557352 ATXN7L1Q9ULK2 861 aaPredicted RBP9.37□□□□□ -0.91
VRK1-207ENST00000557352 KIAA1024Q9UPX6 916 aa9.37□□□□□ -0.91
VRK1-207ENST00000557352 C2CD2LO14523 706 aa9.36□□□□□ -0.91
VRK1-207ENST00000557352 ATP1A2P50993 1020 aa9.36□□□□□ -0.91
VRK1-207ENST00000557352 EPHA4P54764 986 aa9.36□□□□□ -0.91
VRK1-207ENST00000557352 CLDN10P78369 228 aa9.36□□□□□ -0.91
VRK1-207ENST00000557352 SUZ12Q15022 739 aaKnown RBP9.36□□□□□ -0.91
VRK1-207ENST00000557352 NBPF1Q3BBV0 1214 aa9.36□□□□□ -0.91
VRK1-207ENST00000557352 BEND7Q8N7W2 519 aaPredicted RBP9.36□□□□□ -0.91
VRK1-207ENST00000557352 TPCN2Q8NHX9 752 aa9.36□□□□□ -0.91
VRK1-207ENST00000557352 ABHD17AQ96GS6 310 aa9.36□□□□□ -0.91
VRK1-207ENST00000557352 ZDHHC3Q9NYG2 299 aa9.36□□□□□ -0.91
VRK1-207ENST00000557352 A6NJR5 290 aa9.35□□□□□ -0.91
VRK1-207ENST00000557352 FOXK2Q01167 660 aa9.35□□□□□ -0.91
VRK1-207ENST00000557352 CCDC102BQ68D86 513 aa9.35□□□□□ -0.91
VRK1-207ENST00000557352 GPAT2Q6NUI2 795 aa9.35□□□□□ -0.91
VRK1-207ENST00000557352 FIGNL1Q6PIW4 674 aa9.35□□□□□ -0.91
VRK1-207ENST00000557352 NLRP8Q86W28 1048 aa9.35□□□□□ -0.91
VRK1-207ENST00000557352 TNS4Q8IZW8 715 aa9.35□□□□□ -0.91
VRK1-207ENST00000557352 ZCCHC2Q9C0B9 1178 aaKnown RBP9.35□□□□□ -0.91
VRK1-207ENST00000557352 MKRN1Q9UHC7 482 aaKnown RBP9.35□□□□□ -0.91
VRK1-207ENST00000557352 PARP3Q9Y6F1 533 aa9.35□□□□□ -0.91
VRK1-207ENST00000557352 LOC100996750A0A140TA64 210 aa9.34□□□□□ -0.91
VRK1-207ENST00000557352 A0A1W2PNR3 127 aa9.34□□□□□ -0.91
VRK1-207ENST00000557352 PHF20L1A8MW92 1017 aa9.34□□□□□ -0.91
VRK1-207ENST00000557352 SHISA8B8ZZ34 492 aa9.34□□□□□ -0.91
VRK1-207ENST00000557352 ARSJQ5FYB0 599 aaPredicted RBP9.34□□□□□ -0.91
VRK1-207ENST00000557352 ZDHHC1Q8WTX9 485 aa9.34□□□□□ -0.91
VRK1-207ENST00000557352 KRTAP4-6Q9BYQ5 205 aa9.34□□□□□ -0.91
VRK1-207ENST00000557352 PCDHGC4Q9Y5F7 938 aa9.34□□□□□ -0.91
VRK1-207ENST00000557352 TATP17735 454 aaPredicted RBP9.33□□□□□ -0.92
VRK1-207ENST00000557352 FGFR3P22607 806 aa9.33□□□□□ -0.92
VRK1-207ENST00000557352 CTBSQ01459 385 aa9.33□□□□□ -0.92
VRK1-207ENST00000557352 SLC9A9Q8IVB4 645 aa9.33□□□□□ -0.92
VRK1-207ENST00000557352 OGFOD1Q8N543 542 aa9.33□□□□□ -0.92
VRK1-207ENST00000557352 DCAF5Q96JK2 942 aa9.33□□□□□ -0.92
VRK1-207ENST00000557352 ZIC5Q96T25 663 aa9.33□□□□□ -0.92
VRK1-207ENST00000557352 TFIP11Q9UBB9 837 aaKnown RBP9.33□□□□□ -0.92
VRK1-207ENST00000557352 IGHA1P01876 353 aa9.32□□□□□ -0.92
VRK1-207ENST00000557352 TXLNAP40222 546 aa9.32□□□□□ -0.92
VRK1-207ENST00000557352 SNRPNP63162 240 aaKnown RBP9.32□□□□□ -0.92
VRK1-207ENST00000557352 TEAD4Q15561 434 aa9.32□□□□□ -0.92
VRK1-207ENST00000557352 TBCELQ5QJ74 424 aa9.32□□□□□ -0.92
VRK1-207ENST00000557352 PODNQ7Z5L7 613 aa9.32□□□□□ -0.92
VRK1-207ENST00000557352 LARGE2Q8N3Y3 721 aa9.32□□□□□ -0.92
VRK1-207ENST00000557352 GALNT6Q8NCL4 622 aa9.32□□□□□ -0.92
VRK1-207ENST00000557352 L3MBTL2Q969R5 705 aa9.32□□□□□ -0.92
VRK1-207ENST00000557352 HCN2Q9UL51 889 aa9.32□□□□□ -0.92
VRK1-207ENST00000557352 PALM3A6NDB9 673 aaPredicted RBP9.31□□□□□ -0.92
VRK1-207ENST00000557352 ATXN7O15265 892 aaPredicted RBP9.31□□□□□ -0.92
VRK1-207ENST00000557352 ITGB2P05107 769 aa9.31□□□□□ -0.92
VRK1-207ENST00000557352 BMP4P12644 408 aa9.31□□□□□ -0.92
VRK1-207ENST00000557352 NOS2P35228 1153 aa9.31□□□□□ -0.92
VRK1-207ENST00000557352 GDF2Q9UK05 429 aaPredicted RBP9.31□□□□□ -0.92
VRK1-207ENST00000557352 SIX5Q8N196 739 aa9.3□□□□□ -0.92
VRK1-207ENST00000557352 EDARADDQ8WWZ3 215 aa9.3□□□□□ -0.92
VRK1-207ENST00000557352 CALR3Q96L12 384 aaKnown RBP9.3□□□□□ -0.92
VRK1-207ENST00000557352 MAFBQ9Y5Q3 323 aaPredicted RBP9.3□□□□□ -0.92
VRK1-207ENST00000557352 DKK1O94907 266 aa9.29□□□□□ -0.92
VRK1-207ENST00000557352 PLA2G4EQ3MJ16 856 aa9.29□□□□□ -0.92
VRK1-207ENST00000557352 BICDL1Q6ZP65 573 aa9.29□□□□□ -0.92
VRK1-207ENST00000557352 GOLGA6L1Q8N7Z2 621 aa9.29□□□□□ -0.92
VRK1-207ENST00000557352 ZNF594Q96JF6 807 aaPredicted RBP9.29□□□□□ -0.92
VRK1-207ENST00000557352 DCDC2BA2VCK2 349 aa9.28□□□□□ -0.92
VRK1-207ENST00000557352 M0R2N6 131 aa9.28□□□□□ -0.92
VRK1-207ENST00000557352 MAPTP10636 758 aaKnown RBP9.28□□□□□ -0.92
VRK1-207ENST00000557352 HOXB4P17483 251 aaPredicted RBP9.28□□□□□ -0.92
VRK1-207ENST00000557352 TNP2Q05952 138 aa9.28□□□□□ -0.92
VRK1-207ENST00000557352 PPP1R12CQ9BZL4 782 aa9.28□□□□□ -0.92
VRK1-207ENST00000557352 TSPAN10Q9H1Z9 355 aaPredicted RBP9.28□□□□□ -0.92
VRK1-207ENST00000557352 GGA1Q9UJY5 639 aa9.28□□□□□ -0.92
VRK1-207ENST00000557352 ZNF232Q9UNY5 417 aa9.28□□□□□ -0.92
VRK1-207ENST00000557352 GJA3Q9Y6H8 435 aa9.28□□□□□ -0.92
VRK1-207ENST00000557352 SERTM1A2A2V5 107 aa9.27□□□□□ -0.93
VRK1-207ENST00000557352 SFI1A8K8P3 1242 aa9.27□□□□□ -0.93
VRK1-207ENST00000557352 EML1O00423 815 aa9.27□□□□□ -0.93
VRK1-207ENST00000557352 KHNYNO15037 678 aaKnown RBP9.27□□□□□ -0.93
VRK1-207ENST00000557352 RASA1P20936 1047 aa9.27□□□□□ -0.93
VRK1-207ENST00000557352 SH3PXD2AQ5TCZ1 1133 aa9.27□□□□□ -0.93
VRK1-207ENST00000557352 SLCO4C1Q6ZQN7 724 aa9.27□□□□□ -0.93
VRK1-207ENST00000557352 TSEN2Q8NCE0 465 aaKnown RBP9.27□□□□□ -0.93
VRK1-207ENST00000557352 FAM157BP0CG42 384 aa9.26□□□□□ -0.93
VRK1-207ENST00000557352 SAMD5Q5TGI4 173 aa9.26□□□□□ -0.93
VRK1-207ENST00000557352 C7orf43Q8WVR3 580 aa9.26□□□□□ -0.93
VRK1-207ENST00000557352 RBM19Q9Y4C8 960 aaKnown RBP9.26□□□□□ -0.93
VRK1-207ENST00000557352 ARAFP10398 606 aa9.25□□□□□ -0.93
VRK1-207ENST00000557352 CD33P20138 364 aa9.25□□□□□ -0.93
VRK1-207ENST00000557352 PSMA6P60900 246 aaKnown RBP9.25□□□□□ -0.93
VRK1-207ENST00000557352 FAM182BQ5T319 152 aa9.25□□□□□ -0.93
VRK1-207ENST00000557352 KANK4Q5T7N3 995 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms