RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 COL15A1P39059 1388 aa14.34□□□□□ -0.11
PNN-203ENST00000554117 PXDNLA1KZ92 1463 aa14.34□□□□□ -0.11
PNN-203ENST00000554117 A0A087WZG4 1122 aa14.34□□□□□ -0.11
PNN-203ENST00000554117 DNAJC10Q8IXB1 793 aa14.34□□□□□ -0.11
PNN-203ENST00000554117 ATP10DQ9P241 1426 aa14.33□□□□□ -0.11
PNN-203ENST00000554117 TNRC6CQ9HCJ0 1690 aaKnown RBP14.33□□□□□ -0.11
PNN-203ENST00000554117 FCHSD2O94868 740 aa14.33□□□□□ -0.12
PNN-203ENST00000554117 SLC39A6Q13433 755 aa14.33□□□□□ -0.12
PNN-203ENST00000554117 ARFGEF2Q9Y6D5 1785 aa14.32□□□□□ -0.12
PNN-203ENST00000554117 NPHP1O15259 732 aa14.32□□□□□ -0.12
PNN-203ENST00000554117 U2AF1L5P0DN76 240 aaPredicted RBP14.32□□□□□ -0.12
PNN-203ENST00000554117 U2AF1Q01081 240 aaKnown RBP eCLIP14.32□□□□□ -0.12
PNN-203ENST00000554117 PNNQ9H307 717 aaKnown RBP14.32□□□□□ -0.12
PNN-203ENST00000554117 PIM2Q9P1W9 311 aa14.32□□□□□ -0.12
PNN-203ENST00000554117 GOLGB1Q14789 3259 aaKnown RBP14.32□□□□□ -0.12
PNN-203ENST00000554117 NUP98P52948 1817 aa14.31□□□□□ -0.12
PNN-203ENST00000554117 A0A0G2JLW4 131 aa14.31□□□□□ -0.12
PNN-203ENST00000554117 PRKAR2BP31323 418 aa14.31□□□□□ -0.12
PNN-203ENST00000554117 ARHGAP27Q6ZUM4 889 aa14.31□□□□□ -0.12
PNN-203ENST00000554117 FMNL2Q96PY5 1086 aa14.31□□□□□ -0.12
PNN-203ENST00000554117 NARFQ9UHQ1 456 aa14.31□□□□□ -0.12
PNN-203ENST00000554117 ZNF330Q9Y3S2 320 aaPredicted RBP14.31□□□□□ -0.12
PNN-203ENST00000554117 TIAM2Q8IVF5 1701 aa14.31□□□□□ -0.12
PNN-203ENST00000554117 SOS1Q07889 1333 aaPredicted RBP14.31□□□□□ -0.12
PNN-203ENST00000554117 ANKRD31Q8N7Z5 1873 aa14.31□□□□□ -0.12
PNN-203ENST00000554117 BTBD11A6QL63 1104 aa14.3□□□□□ -0.12
PNN-203ENST00000554117 CYP19A1P11511 503 aaPredicted RBP14.3□□□□□ -0.12
PNN-203ENST00000554117 CANXP27824 592 aaKnown RBP14.3□□□□□ -0.12
PNN-203ENST00000554117 USPL1Q5W0Q7 1092 aa14.3□□□□□ -0.12
PNN-203ENST00000554117 INTS5Q6P9B9 1019 aaKnown RBP14.3□□□□□ -0.12
PNN-203ENST00000554117 ZNF790Q6PG37 636 aa14.3□□□□□ -0.12
PNN-203ENST00000554117 ZNF526Q8TF50 670 aaPredicted RBP14.3□□□□□ -0.12
PNN-203ENST00000554117 SRP68Q9UHB9 627 aaKnown RBP14.3□□□□□ -0.12
PNN-203ENST00000554117 HEG1Q9ULI3 1381 aa14.3□□□□□ -0.12
PNN-203ENST00000554117 KDM3BQ7LBC6 1761 aa14.29□□□□□ -0.12
PNN-203ENST00000554117 PPP2R1AP30153 589 aa14.29□□□□□ -0.12
PNN-203ENST00000554117 FKBP8Q14318 412 aa14.29□□□□□ -0.12
PNN-203ENST00000554117 DALRD3Q5D0E6 543 aaKnown RBP14.29□□□□□ -0.12
PNN-203ENST00000554117 DPEP1P16444 411 aa14.28□□□□□ -0.12
PNN-203ENST00000554117 ZBTB1Q9Y2K1 713 aa14.28□□□□□ -0.12
PNN-203ENST00000554117 RSPH6AQ9H0K4 717 aa14.27□□□□□ -0.13
PNN-203ENST00000554117 FER1L6Q2WGJ9 1857 aa14.27□□□□□ -0.13
PNN-203ENST00000554117 ADCY9O60503 1353 aa14.26□□□□□ -0.13
PNN-203ENST00000554117 MAPK8IP3Q9UPT6 1336 aa14.26□□□□□ -0.13
PNN-203ENST00000554117 C16orf71Q8IYS4 520 aaPredicted RBP14.26□□□□□ -0.13
PNN-203ENST00000554117 PDZRN3Q9UPQ7 1066 aa14.26□□□□□ -0.13
PNN-203ENST00000554117 POLRMTO00411 1230 aaKnown RBP14.25□□□□□ -0.13
PNN-203ENST00000554117 HTATSF1O43719 755 aaKnown RBP14.25□□□□□ -0.13
PNN-203ENST00000554117 IL6STP40189 918 aaPredicted RBP14.25□□□□□ -0.13
PNN-203ENST00000554117 IL17REQ8NFR9 667 aa14.25□□□□□ -0.13
PNN-203ENST00000554117 ZNF496Q96IT1 587 aaPredicted RBP14.25□□□□□ -0.13
PNN-203ENST00000554117 ZNF652Q9Y2D9 606 aa14.25□□□□□ -0.13
PNN-203ENST00000554117 COL11A2P13942 1736 aaPredicted RBP14.24□□□□□ -0.13
PNN-203ENST00000554117 CEMIPQ8WUJ3 1361 aa14.24□□□□□ -0.13
PNN-203ENST00000554117 H0YIN7 160 aa14.24□□□□□ -0.13
PNN-203ENST00000554117 SERPINB2P05120 415 aa14.24□□□□□ -0.13
PNN-203ENST00000554117 TM4SF1P30408 202 aa14.24□□□□□ -0.13
PNN-203ENST00000554117 CARMIL3Q8ND23 1372 aa14.23□□□□□ -0.13
PNN-203ENST00000554117 KDM2BQ8NHM5 1336 aa14.23□□□□□ -0.13
PNN-203ENST00000554117 DDR1Q08345 913 aa14.23□□□□□ -0.13
PNN-203ENST00000554117 NFIXQ14938 502 aa14.23□□□□□ -0.13
PNN-203ENST00000554117 BICDL1Q6ZP65 573 aa14.23□□□□□ -0.13
PNN-203ENST00000554117 ANKRD36CQ5JPF3 1778 aa14.22□□□□□ -0.13
PNN-203ENST00000554117 PDE6BP35913 854 aa14.22□□□□□ -0.13
PNN-203ENST00000554117 EIF5P55010 431 aaKnown RBP14.22□□□□□ -0.13
PNN-203ENST00000554117 ST5P78524 1137 aa14.22□□□□□ -0.13
PNN-203ENST00000554117 PNISRQ8TF01 805 aaKnown RBP14.22□□□□□ -0.13
PNN-203ENST00000554117 PHACTR3Q96KR7 559 aa14.22□□□□□ -0.13
PNN-203ENST00000554117 SETDB2Q96T68 719 aa14.22□□□□□ -0.13
PNN-203ENST00000554117 WDR90Q96KV7 1748 aa14.21□□□□□ -0.13
PNN-203ENST00000554117 SNRPA1P09661 255 aaKnown RBP14.21□□□□□ -0.13
PNN-203ENST00000554117 CHRNA5P30532 468 aa14.2□□□□□ -0.14
PNN-203ENST00000554117 TAF7Q15545 349 aaPredicted RBP14.2□□□□□ -0.14
PNN-203ENST00000554117 MCM10Q7L590 875 aa14.2□□□□□ -0.14
PNN-203ENST00000554117 DZIP3Q86Y13 1208 aaKnown RBP14.2□□□□□ -0.14
PNN-203ENST00000554117 C2CD5Q86YS7 1000 aa14.2□□□□□ -0.14
PNN-203ENST00000554117 TTLL6Q8N841 843 aa14.2□□□□□ -0.14
PNN-203ENST00000554117 TBC1D2BQ9UPU7 963 aa14.2□□□□□ -0.14
PNN-203ENST00000554117 RALBP1Q15311 655 aa14.19□□□□□ -0.14
PNN-203ENST00000554117 C9orf131Q5VYM1 1079 aa14.19□□□□□ -0.14
PNN-203ENST00000554117 CNBD1Q8NA66 436 aa14.19□□□□□ -0.14
PNN-203ENST00000554117 RNF181Q9P0P0 153 aa14.19□□□□□ -0.14
PNN-203ENST00000554117 SLX4Q8IY92 1834 aa14.19□□□□□ -0.14
PNN-203ENST00000554117 KCNA3P22001 575 aa14.18□□□□□ -0.14
PNN-203ENST00000554117 ZNF622Q969S3 477 aaKnown RBP eCLIP14.18□□□□□ -0.145e-10■□□□□ 10.3
PNN-203ENST00000554117 ZC3H4Q9UPT8 1303 aaKnown RBP14.17□□□□□ -0.14
PNN-203ENST00000554117 TOMM70O94826 608 aa14.17□□□□□ -0.14
PNN-203ENST00000554117 A1BGP04217 495 aa14.17□□□□□ -0.14
PNN-203ENST00000554117 GTF2E1P29083 439 aaPredicted RBP14.17□□□□□ -0.14
PNN-203ENST00000554117 TBC1D9BQ66K14 1250 aa14.17□□□□□ -0.14
PNN-203ENST00000554117 BRIP1Q9BX63 1249 aa14.17□□□□□ -0.14
PNN-203ENST00000554117 SCN4AP35499 1836 aa14.16□□□□□ -0.14
PNN-203ENST00000554117 HSPA6P17066 643 aa14.16□□□□□ -0.14
PNN-203ENST00000554117 LMOD3Q0VAK6 560 aa14.16□□□□□ -0.14
PNN-203ENST00000554117 SOGA3Q5TF21 947 aa14.16□□□□□ -0.14
PNN-203ENST00000554117 CLEC4GQ6UXB4 293 aa14.16□□□□□ -0.14
PNN-203ENST00000554117 LMNB1P20700 586 aa14.15□□□□□ -0.14
PNN-203ENST00000554117 DCTN1Q14203 1278 aa14.15□□□□□ -0.14
PNN-203ENST00000554117 NFE2L2Q16236 605 aa14.15□□□□□ -0.14
PNN-203ENST00000554117 KIF6Q6ZMV9 814 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms