RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 ABHD8Q96I13 439 aa21.03■□□□□ 0.96
BRF1-220ENST00000552127 EYA1Q99502 592 aa21.03■□□□□ 0.96
BRF1-220ENST00000552127 EIF4A2Q14240 407 aaKnown RBP21.02■□□□□ 0.96
BRF1-220ENST00000552127 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.02■□□□□ 0.96
BRF1-220ENST00000552127 POLRMTO00411 1230 aaKnown RBP21.01■□□□□ 0.95
BRF1-220ENST00000552127 LBX1P52954 281 aa21.01■□□□□ 0.95
BRF1-220ENST00000552127 AMER1Q5JTC6 1135 aaPredicted RBP21.01■□□□□ 0.95
BRF1-220ENST00000552127 CHADLQ6NUI6 762 aa21.01■□□□□ 0.95
BRF1-220ENST00000552127 USP42Q9H9J4 1324 aaKnown RBP21.01■□□□□ 0.95
BRF1-220ENST00000552127 DPY19L2Q6NUT2 758 aa20.99■□□□□ 0.95
BRF1-220ENST00000552127 DLEC1Q9Y238 1755 aa20.98■□□□□ 0.95
BRF1-220ENST00000552127 POTEIP0CG38 1075 aa20.98■□□□□ 0.95
BRF1-220ENST00000552127 POTEJP0CG39 1038 aa20.98■□□□□ 0.95
BRF1-220ENST00000552127 MLLT1Q03111 559 aaPredicted RBP20.98■□□□□ 0.95
BRF1-220ENST00000552127 VIRMAQ69YN4 1812 aaKnown RBP20.98■□□□□ 0.95
BRF1-220ENST00000552127 NFKBIEO00221 500 aa20.97■□□□□ 0.95
BRF1-220ENST00000552127 TM4SF1P30408 202 aa20.97■□□□□ 0.95
BRF1-220ENST00000552127 VEGFBP49765 207 aa20.97■□□□□ 0.95
BRF1-220ENST00000552127 WBP1LQ9NX94 342 aa20.97■□□□□ 0.95
BRF1-220ENST00000552127 AFDNP55196 1824 aaKnown RBP20.96■□□□□ 0.95
BRF1-220ENST00000552127 ERVV-2B6SEH9 535 aa20.95■□□□□ 0.94
BRF1-220ENST00000552127 PER1O15534 1290 aaPredicted RBP20.95■□□□□ 0.94
BRF1-220ENST00000552127 CRKLP46109 303 aaKnown RBP20.95■□□□□ 0.94
BRF1-220ENST00000552127 DICER1Q9UPY3 1922 aaKnown RBP20.94■□□□□ 0.94
BRF1-220ENST00000552127 ADAMTS7Q9UKP4 1686 aa20.94■□□□□ 0.94
BRF1-220ENST00000552127 TTLL6Q8N841 843 aa20.94■□□□□ 0.94
BRF1-220ENST00000552127 PASKQ96RG2 1323 aa20.93■□□□□ 0.94
BRF1-220ENST00000552127 NPC1L1Q9UHC9 1359 aa20.93■□□□□ 0.94
BRF1-220ENST00000552127 HSPA8P11142 646 aaKnown RBP20.92■□□□□ 0.94
BRF1-220ENST00000552127 RGS19P49795 217 aa20.92■□□□□ 0.94
BRF1-220ENST00000552127 CCDC85CA6NKD9 419 aa20.91■□□□□ 0.94
BRF1-220ENST00000552127 PTCD1O75127 700 aaKnown RBP20.91■□□□□ 0.94
BRF1-220ENST00000552127 NRXN2Q9P2S2 1712 aa20.91■□□□□ 0.94
BRF1-220ENST00000552127 TJP1Q07157 1748 aa20.9■□□□□ 0.94
BRF1-220ENST00000552127 ERFEQ4G0M1 354 aa20.9■□□□□ 0.94
BRF1-220ENST00000552127 CC2D1BQ5T0F9 858 aaKnown RBP20.9■□□□□ 0.94
BRF1-220ENST00000552127 USPL1Q5W0Q7 1092 aa20.9■□□□□ 0.94
BRF1-220ENST00000552127 SCN11AQ9UI33 1791 aa20.9■□□□□ 0.94
BRF1-220ENST00000552127 TMEM88BA6NKF7 163 aa20.89■□□□□ 0.93
BRF1-220ENST00000552127 ZPR1O75312 459 aa20.88■□□□□ 0.93
BRF1-220ENST00000552127 C2CD5Q86YS7 1000 aa20.88■□□□□ 0.93
BRF1-220ENST00000552127 FER1L6Q2WGJ9 1857 aa20.88■□□□□ 0.93
BRF1-220ENST00000552127 DDNO94850 711 aaPredicted RBP20.87■□□□□ 0.93
BRF1-220ENST00000552127 IL13P35225 146 aa20.87■□□□□ 0.93
BRF1-220ENST00000552127 CABP4P57796 275 aa20.87■□□□□ 0.93
BRF1-220ENST00000552127 NFIXQ14938 502 aa20.87■□□□□ 0.93
BRF1-220ENST00000552127 INTS5Q6P9B9 1019 aaKnown RBP20.87■□□□□ 0.93
BRF1-220ENST00000552127 AEBP1Q8IUX7 1158 aa20.87■□□□□ 0.93
BRF1-220ENST00000552127 HSP90AB1P08238 724 aaKnown RBP20.86■□□□□ 0.93
BRF1-220ENST00000552127 MTHFSP49914 203 aa20.86■□□□□ 0.93
BRF1-220ENST00000552127 COL3A1P02461 1466 aaPredicted RBP20.86■□□□□ 0.93
BRF1-220ENST00000552127 H0YIN7 160 aa20.85■□□□□ 0.93
BRF1-220ENST00000552127 LDHDQ86WU2 507 aa20.85■□□□□ 0.93
BRF1-220ENST00000552127 ITGBL1O95965 494 aaPredicted RBP20.84■□□□□ 0.93
BRF1-220ENST00000552127 SERPINB2P05120 415 aa20.84■□□□□ 0.93
BRF1-220ENST00000552127 PLEKHO1Q53GL0 409 aaPredicted RBP20.84■□□□□ 0.93
BRF1-220ENST00000552127 SULT6B1Q6IMI4 303 aa20.84■□□□□ 0.93
BRF1-220ENST00000552127 ZNF219Q9P2Y4 722 aaPredicted RBP20.84■□□□□ 0.93
BRF1-220ENST00000552127 TNRC18O15417 2968 aaPredicted RBP20.84■□□□□ 0.93
BRF1-220ENST00000552127 CARMIL3Q8ND23 1372 aa20.84■□□□□ 0.93
BRF1-220ENST00000552127 MAP2K1Q02750 393 aaPredicted RBP20.83■□□□□ 0.93
BRF1-220ENST00000552127 AMOTQ4VCS5 1084 aa20.83■□□□□ 0.93
BRF1-220ENST00000552127 SCN4AP35499 1836 aa20.83■□□□□ 0.92
BRF1-220ENST00000552127 C21orf2O43822 256 aa20.82■□□□□ 0.92
BRF1-220ENST00000552127 ZNF530Q6P9A1 599 aaPredicted RBP20.82■□□□□ 0.92
BRF1-220ENST00000552127 SOS1Q07889 1333 aaPredicted RBP20.81■□□□□ 0.92
BRF1-220ENST00000552127 IQCA1LA6NCM1 817 aa20.81■□□□□ 0.92
BRF1-220ENST00000552127 RASSF10A6NK89 507 aa20.81■□□□□ 0.92
BRF1-220ENST00000552127 CNGB1Q14028 1251 aaPredicted RBP20.81■□□□□ 0.92
BRF1-220ENST00000552127 DEFB115Q30KQ5 88 aa20.81■□□□□ 0.92
BRF1-220ENST00000552127 TAF1DQ9H5J8 278 aaPredicted RBP20.81■□□□□ 0.92
BRF1-220ENST00000552127 WDR33Q9C0J8 1336 aaKnown RBP20.8■□□□□ 0.92
BRF1-220ENST00000552127 NFATC2IPQ8NCF5 419 aa20.8■□□□□ 0.92
BRF1-220ENST00000552127 NARFQ9UHQ1 456 aa20.8■□□□□ 0.92
BRF1-220ENST00000552127 ZNF622Q969S3 477 aaKnown RBP eCLIP20.79■□□□□ 0.924e-9■■□□□ 13.9
BRF1-220ENST00000552127 TAOK3Q9H2K8 898 aa20.79■□□□□ 0.92
BRF1-220ENST00000552127 BCL2L12Q9HB09 334 aa20.79■□□□□ 0.92
BRF1-220ENST00000552127 ANKRD31Q8N7Z5 1873 aa20.79■□□□□ 0.92
BRF1-220ENST00000552127 LTBP3Q9NS15 1303 aa20.78■□□□□ 0.92
BRF1-220ENST00000552127 DIAPH1O60610 1272 aaKnown RBP20.78■□□□□ 0.92
BRF1-220ENST00000552127 DNAJC10Q8IXB1 793 aa20.78■□□□□ 0.92
BRF1-220ENST00000552127 EAPPQ56P03 285 aaPredicted RBP20.77■□□□□ 0.92
BRF1-220ENST00000552127 C1orf141Q5JVX7 400 aa20.77■□□□□ 0.92
BRF1-220ENST00000552127 L3MBTL3Q96JM7 780 aaPredicted RBP20.77■□□□□ 0.92
BRF1-220ENST00000552127 COL11A2P13942 1736 aaPredicted RBP20.76■□□□□ 0.91
BRF1-220ENST00000552127 COL15A1P39059 1388 aa20.76■□□□□ 0.91
BRF1-220ENST00000552127 ADAMTSL1Q8N6G6 1762 aa20.76■□□□□ 0.91
BRF1-220ENST00000552127 HMOX1P09601 288 aa20.75■□□□□ 0.91
BRF1-220ENST00000552127 CFAP44Q96MT7 982 aa20.75■□□□□ 0.91
BRF1-220ENST00000552127 CLEC11AQ9Y240 323 aa20.75■□□□□ 0.91
BRF1-220ENST00000552127 MRC1P22897 1456 aa20.75■□□□□ 0.91
BRF1-220ENST00000552127 CACNA1SQ13698 1873 aa20.74■□□□□ 0.91
BRF1-220ENST00000552127 THSD7BQ9C0I4 1608 aa20.74■□□□□ 0.91
BRF1-220ENST00000552127 CYP19A1P11511 503 aaPredicted RBP20.73■□□□□ 0.91
BRF1-220ENST00000552127 BICDL1Q6ZP65 573 aa20.73■□□□□ 0.91
BRF1-220ENST00000552127 ABT1Q9ULW3 272 aaKnown RBP20.73■□□□□ 0.91
BRF1-220ENST00000552127 PDE4DIPQ5VU43 2346 aa20.72■□□□□ 0.91
BRF1-220ENST00000552127 SLX4Q8IY92 1834 aa20.72■□□□□ 0.91
BRF1-220ENST00000552127 PDE6BP35913 854 aa20.72■□□□□ 0.91
BRF1-220ENST00000552127 CNTROBQ8N137 903 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms