RNA–Protein interactions for RNA: ENST00000545202.1

AP000439.3-201, humanhuman

TSL 2 BASIC

Gene AP000439.3, Length 2,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.3-201ENST00000545202 CUL4AQ13619 759 aa18.98■□□□□ 0.63
AP000439.3-201ENST00000545202 CHPF2Q9P2E5 772 aa18.98■□□□□ 0.63
AP000439.3-201ENST00000545202 RBM33Q96EV2 1170 aaKnown RBP18.98■□□□□ 0.63
AP000439.3-201ENST00000545202 KDM3BQ7LBC6 1761 aa18.97■□□□□ 0.63
AP000439.3-201ENST00000545202 SRGAP3O43295 1099 aa18.97■□□□□ 0.63
AP000439.3-201ENST00000545202 KCNQ3O43525 872 aa18.97■□□□□ 0.63
AP000439.3-201ENST00000545202 MAP4K4O95819 1239 aaPredicted RBP18.97■□□□□ 0.63
AP000439.3-201ENST00000545202 RHPN1Q8TCX5 695 aa18.97■□□□□ 0.63
AP000439.3-201ENST00000545202 PPP1R9BQ96SB3 815 aa18.97■□□□□ 0.63
AP000439.3-201ENST00000545202 ZBTB7CA1YPR0 619 aa18.97■□□□□ 0.63
AP000439.3-201ENST00000545202 PI4KAP2A4QPH2 592 aa18.97■□□□□ 0.63
AP000439.3-201ENST00000545202 PI4KAP1Q8N8J0 262 aa18.97■□□□□ 0.63
AP000439.3-201ENST00000545202 UPF3BQ9BZI7 483 aaKnown RBP18.97■□□□□ 0.63
AP000439.3-201ENST00000545202 RBM27Q9P2N5 1060 aaKnown RBP18.97■□□□□ 0.63
AP000439.3-201ENST00000545202 MED1Q15648 1581 aaPredicted RBP18.97■□□□□ 0.63
AP000439.3-201ENST00000545202 ANP32BQ92688 251 aaKnown RBP18.96■□□□□ 0.63
AP000439.3-201ENST00000545202 BEND3Q5T5X7 828 aa18.96■□□□□ 0.63
AP000439.3-201ENST00000545202 PI4K2BQ8TCG2 481 aa18.96■□□□□ 0.63
AP000439.3-201ENST00000545202 DNAAF4Q8WXU2 420 aa18.96■□□□□ 0.63
AP000439.3-201ENST00000545202 IL17RAQ96F46 866 aa18.96■□□□□ 0.63
AP000439.3-201ENST00000545202 NFAT5O94916 1531 aa18.95■□□□□ 0.62
AP000439.3-201ENST00000545202 BRD1O95696 1058 aa18.95■□□□□ 0.62
AP000439.3-201ENST00000545202 ANXA1P04083 346 aa18.95■□□□□ 0.62
AP000439.3-201ENST00000545202 INTS4Q96HW7 963 aaKnown RBP18.95■□□□□ 0.62
AP000439.3-201ENST00000545202 CHD2O14647 1828 aaKnown RBP18.95■□□□□ 0.62
AP000439.3-201ENST00000545202 HOXB7P09629 217 aa18.95■□□□□ 0.62
AP000439.3-201ENST00000545202 KIF1BPQ96EK5 621 aa18.95■□□□□ 0.62
AP000439.3-201ENST00000545202 NAP1L5Q96NT1 182 aaPredicted RBP18.94■□□□□ 0.62
AP000439.3-201ENST00000545202 HSPA4P34932 840 aa18.93■□□□□ 0.62
AP000439.3-201ENST00000545202 PRIM1P49642 420 aaKnown RBP18.93■□□□□ 0.62
AP000439.3-201ENST00000545202 TEFQ10587 303 aa18.93■□□□□ 0.62
AP000439.3-201ENST00000545202 LRRC59Q96AG4 307 aaKnown RBP18.93■□□□□ 0.62
AP000439.3-201ENST00000545202 RBSNQ9H1K0 784 aa18.93■□□□□ 0.62
AP000439.3-201ENST00000545202 NSFL1CQ9UNZ2 370 aaKnown RBP18.93■□□□□ 0.62
AP000439.3-201ENST00000545202 BTBD11A6QL63 1104 aa18.93■□□□□ 0.62
AP000439.3-201ENST00000545202 PSME1Q06323 249 aa18.93■□□□□ 0.62
AP000439.3-201ENST00000545202 TMEM63CQ9P1W3 806 aa18.93■□□□□ 0.62
AP000439.3-201ENST00000545202 EPB41L2O43491 1005 aaKnown RBP18.92■□□□□ 0.62
AP000439.3-201ENST00000545202 ZNF530Q6P9A1 599 aaPredicted RBP18.92■□□□□ 0.62
AP000439.3-201ENST00000545202 MPRIPQ6WCQ1 1025 aa18.92■□□□□ 0.62
AP000439.3-201ENST00000545202 LMO7Q8WWI1 1683 aa18.92■□□□□ 0.62
AP000439.3-201ENST00000545202 ESCO1Q5FWF5 840 aa18.92■□□□□ 0.62
AP000439.3-201ENST00000545202 AKAP4Q5JQC9 854 aa18.92■□□□□ 0.62
AP000439.3-201ENST00000545202 CHMP4AQ9BY43 222 aa18.91■□□□□ 0.62
AP000439.3-201ENST00000545202 ADCY9O60503 1353 aa18.91■□□□□ 0.62
AP000439.3-201ENST00000545202 SGSM2O43147 1006 aa18.91■□□□□ 0.62
AP000439.3-201ENST00000545202 KCNH5Q8NCM2 988 aa18.91■□□□□ 0.62
AP000439.3-201ENST00000545202 CNTROBQ8N137 903 aa18.9■□□□□ 0.62
AP000439.3-201ENST00000545202 PLEKHO1Q53GL0 409 aaPredicted RBP18.9■□□□□ 0.62
AP000439.3-201ENST00000545202 RAD50Q92878 1312 aa18.9■□□□□ 0.62
AP000439.3-201ENST00000545202 TCHHQ07283 1943 aa18.9■□□□□ 0.62
AP000439.3-201ENST00000545202 SYCE3A1L190 88 aa18.89■□□□□ 0.61
AP000439.3-201ENST00000545202 HSP90AB4PQ58FF6 505 aa18.89■□□□□ 0.61
AP000439.3-201ENST00000545202 PLEKHG5O94827 1062 aa18.88■□□□□ 0.61
AP000439.3-201ENST00000545202 MBD3O95983 291 aa18.88■□□□□ 0.61
AP000439.3-201ENST00000545202 LRSAM1Q6UWE0 723 aa18.88■□□□□ 0.61
AP000439.3-201ENST00000545202 DBF4Q9UBU7 674 aaPredicted RBP18.88■□□□□ 0.61
AP000439.3-201ENST00000545202 OS9Q13438 667 aaPredicted RBP18.88■□□□□ 0.61
AP000439.3-201ENST00000545202 LSG1Q9H089 658 aaKnown RBP18.88■□□□□ 0.61
AP000439.3-201ENST00000545202 SNX14Q9Y5W7 946 aa18.88■□□□□ 0.61
AP000439.3-201ENST00000545202 PHRF1Q9P1Y6 1649 aaKnown RBP18.87■□□□□ 0.61
AP000439.3-201ENST00000545202 RNMTO43148 476 aaKnown RBP18.87■□□□□ 0.61
AP000439.3-201ENST00000545202 CWC27Q6UX04 472 aaKnown RBP18.87■□□□□ 0.61
AP000439.3-201ENST00000545202 ANKLE2Q86XL3 938 aa18.87■□□□□ 0.61
AP000439.3-201ENST00000545202 FOXD4L6Q3SYB3 417 aaPredicted RBP18.86■□□□□ 0.61
AP000439.3-201ENST00000545202 FOXD4L3Q6VB84 417 aaPredicted RBP18.86■□□□□ 0.61
AP000439.3-201ENST00000545202 MAP3K2Q9Y2U5 619 aa18.86■□□□□ 0.61
AP000439.3-201ENST00000545202 AMOTQ4VCS5 1084 aa18.86■□□□□ 0.61
AP000439.3-201ENST00000545202 C1orf141Q5JVX7 400 aa18.86■□□□□ 0.61
AP000439.3-201ENST00000545202 ZSCAN30Q86W11 494 aa18.86■□□□□ 0.61
AP000439.3-201ENST00000545202 PXDNQ92626 1479 aa18.86■□□□□ 0.61
AP000439.3-201ENST00000545202 CRYBG1Q9Y4K1 1723 aa18.86■□□□□ 0.61
AP000439.3-201ENST00000545202 USP42Q9H9J4 1324 aaKnown RBP18.86■□□□□ 0.61
AP000439.3-201ENST00000545202 PROSER3Q2NL68 480 aa18.85■□□□□ 0.61
AP000439.3-201ENST00000545202 KIAA1211Q6ZU35 1233 aa18.85■□□□□ 0.61
AP000439.3-201ENST00000545202 RASEFQ8IZ41 740 aa18.85■□□□□ 0.61
AP000439.3-201ENST00000545202 C9orf78Q9NZ63 289 aaPredicted RBP18.85■□□□□ 0.61
AP000439.3-201ENST00000545202 SPG7Q9UQ90 795 aa18.85■□□□□ 0.61
AP000439.3-201ENST00000545202 TTC41PQ6P2S7 1318 aa18.85■□□□□ 0.61
AP000439.3-201ENST00000545202 MTX1Q13505 466 aa18.85■□□□□ 0.61
AP000439.3-201ENST00000545202 ADGRL3Q9HAR2 1447 aa18.84■□□□□ 0.61
AP000439.3-201ENST00000545202 GIGYF1O75420 1035 aaPredicted RBP18.84■□□□□ 0.61
AP000439.3-201ENST00000545202 GLRX3O76003 335 aaKnown RBP18.84■□□□□ 0.61
AP000439.3-201ENST00000545202 GCP02774 474 aa18.84■□□□□ 0.61
AP000439.3-201ENST00000545202 CLASRPQ8N2M8 674 aaKnown RBP18.84■□□□□ 0.61
AP000439.3-201ENST00000545202 TTC14Q96N46 770 aa18.84■□□□□ 0.61
AP000439.3-201ENST00000545202 WDR33Q9C0J8 1336 aaKnown RBP18.84■□□□□ 0.61
AP000439.3-201ENST00000545202 XPCQ01831 940 aaPredicted RBP18.84■□□□□ 0.61
AP000439.3-201ENST00000545202 PRAMEF22A3QJZ6 481 aa18.83■□□□□ 0.61
AP000439.3-201ENST00000545202 AK2P54819 239 aa18.83■□□□□ 0.61
AP000439.3-201ENST00000545202 KSR2Q6VAB6 950 aa18.83■□□□□ 0.61
AP000439.3-201ENST00000545202 ARHGEF25Q86VW2 580 aa18.83■□□□□ 0.61
AP000439.3-201ENST00000545202 PDLIM2Q96JY6 352 aa18.83■□□□□ 0.61
AP000439.3-201ENST00000545202 GDPD2Q9HCC8 539 aa18.83■□□□□ 0.61
AP000439.3-201ENST00000545202 ALDH1L1O75891 902 aa18.83■□□□□ 0.6
AP000439.3-201ENST00000545202 CWF19L2Q2TBE0 894 aaKnown RBP18.83■□□□□ 0.6
AP000439.3-201ENST00000545202 LARP6Q9BRS8 491 aaKnown RBP18.83■□□□□ 0.6
AP000439.3-201ENST00000545202 PA2G4Q9UQ80 394 aaKnown RBP18.83■□□□□ 0.6
AP000439.3-201ENST00000545202 ORAI2Q96SN7 254 aa18.82■□□□□ 0.6
AP000439.3-201ENST00000545202 NCAPD2Q15021 1401 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms