RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 EML1O00423 815 aa10.93□□□□□ -0.66
LEMD3-206ENST00000545026 NPR3P17342 541 aa10.93□□□□□ -0.66
LEMD3-206ENST00000545026 ARHGAP4P98171 946 aa10.93□□□□□ -0.66
LEMD3-206ENST00000545026 C16orf46Q6P387 395 aa10.93□□□□□ -0.66
LEMD3-206ENST00000545026 HIRAP54198 1017 aaPredicted RBP10.92□□□□□ -0.66
LEMD3-206ENST00000545026 COX20Q5RI15 118 aa10.92□□□□□ -0.66
LEMD3-206ENST00000545026 SH3PXD2AQ5TCZ1 1133 aa10.92□□□□□ -0.66
LEMD3-206ENST00000545026 ZSCAN10Q96SZ4 725 aaPredicted RBP10.92□□□□□ -0.66
LEMD3-206ENST00000545026 SERTM1A2A2V5 107 aa10.91□□□□□ -0.66
LEMD3-206ENST00000545026 NOS2P35228 1153 aa10.91□□□□□ -0.66
LEMD3-206ENST00000545026 TSEN34Q9BSV6 310 aaKnown RBP10.91□□□□□ -0.66
LEMD3-206ENST00000545026 GRIP2Q9C0E4 1043 aa10.91□□□□□ -0.66
LEMD3-206ENST00000545026 QTRT2Q9H974 415 aaKnown RBP10.91□□□□□ -0.66
LEMD3-206ENST00000545026 AMOTL2Q9Y2J4 779 aa10.91□□□□□ -0.66
LEMD3-206ENST00000545026 CHMP3Q9Y3E7 222 aa10.91□□□□□ -0.66
LEMD3-206ENST00000545026 GPC1P35052 558 aa10.9□□□□□ -0.66
LEMD3-206ENST00000545026 L3MBTL2Q969R5 705 aa10.9□□□□□ -0.66
LEMD3-206ENST00000545026 MYO19Q96H55 970 aa10.9□□□□□ -0.66
LEMD3-206ENST00000545026 CABP1Q9NZU7 370 aa10.9□□□□□ -0.66
LEMD3-206ENST00000545026 TNFRSF10BO14763 440 aa10.89□□□□□ -0.67
LEMD3-206ENST00000545026 CAPN5O15484 640 aaPredicted RBP10.89□□□□□ -0.67
LEMD3-206ENST00000545026 SPINT1O43278 529 aa10.89□□□□□ -0.67
LEMD3-206ENST00000545026 ZNF428Q96B54 188 aa10.89□□□□□ -0.67
LEMD3-206ENST00000545026 INSM2Q96T92 566 aaPredicted RBP10.89□□□□□ -0.67
LEMD3-206ENST00000545026 LRFN2Q9ULH4 789 aa10.89□□□□□ -0.67
LEMD3-206ENST00000545026 FAM13AO94988 1023 aa10.88□□□□□ -0.67
LEMD3-206ENST00000545026 ERCC3P19447 782 aa10.88□□□□□ -0.67
LEMD3-206ENST00000545026 RNF144AP50876 292 aaPredicted RBP10.88□□□□□ -0.67
LEMD3-206ENST00000545026 TMEM214Q6NUQ4 689 aaKnown RBP10.88□□□□□ -0.67
LEMD3-206ENST00000545026 NIFKQ9BYG3 293 aaKnown RBP10.88□□□□□ -0.67
LEMD3-206ENST00000545026 ZNF232Q9UNY5 417 aa10.88□□□□□ -0.67
LEMD3-206ENST00000545026 PARP3Q9Y6F1 533 aa10.88□□□□□ -0.67
LEMD3-206ENST00000545026 RGS20O76081 388 aa10.87□□□□□ -0.67
LEMD3-206ENST00000545026 MPSTP25325 297 aa10.87□□□□□ -0.67
LEMD3-206ENST00000545026 LINC00528Q8N1L1 170 aa10.87□□□□□ -0.67
LEMD3-206ENST00000545026 RHBDD1Q8TEB9 315 aa10.87□□□□□ -0.67
LEMD3-206ENST00000545026 PDZRN3Q9UPQ7 1066 aa10.87□□□□□ -0.67
LEMD3-206ENST00000545026 HCN4Q9Y3Q4 1203 aa10.87□□□□□ -0.67
LEMD3-206ENST00000545026 ALDH16A1Q8IZ83 802 aa10.86□□□□□ -0.67
LEMD3-206ENST00000545026 NGLY1Q96IV0 654 aa10.86□□□□□ -0.67
LEMD3-206ENST00000545026 STIM2Q9P246 746 aa10.86□□□□□ -0.67
LEMD3-206ENST00000545026 DCTN4Q9UJW0 460 aa10.86□□□□□ -0.67
LEMD3-206ENST00000545026 CTSOP43234 321 aaPredicted RBP10.85□□□□□ -0.67
LEMD3-206ENST00000545026 RANGAP1P46060 587 aaPredicted RBP10.85□□□□□ -0.67
LEMD3-206ENST00000545026 SLC27A3Q5K4L6 730 aa10.85□□□□□ -0.67
LEMD3-206ENST00000545026 GTF2E1P29083 439 aaPredicted RBP10.84□□□□□ -0.67
LEMD3-206ENST00000545026 RBM25P49756 843 aaKnown RBP10.84□□□□□ -0.67
LEMD3-206ENST00000545026 RTN1Q16799 776 aa10.84□□□□□ -0.67
LEMD3-206ENST00000545026 C4orf17Q53FE4 359 aa10.84□□□□□ -0.67
LEMD3-206ENST00000545026 FAM26DQ5JW98 314 aa10.84□□□□□ -0.67
LEMD3-206ENST00000545026 GNASQ5JWF2 1037 aa10.84□□□□□ -0.67
LEMD3-206ENST00000545026 PHACTR1Q9C0D0 580 aa10.84□□□□□ -0.67
LEMD3-206ENST00000545026 ANKRD33BA6NCL7 494 aa10.83□□□□□ -0.68
LEMD3-206ENST00000545026 UPP2O95045 317 aa10.83□□□□□ -0.68
LEMD3-206ENST00000545026 MAPK1P28482 360 aa10.83□□□□□ -0.68
LEMD3-206ENST00000545026 POLMQ9NP87 494 aaPredicted RBP10.83□□□□□ -0.68
LEMD3-206ENST00000545026 SPATA31C2B4DYI2 1134 aa10.82□□□□□ -0.68
LEMD3-206ENST00000545026 AVPP01185 164 aa10.82□□□□□ -0.68
LEMD3-206ENST00000545026 TXLNAP40222 546 aa10.82□□□□□ -0.68
LEMD3-206ENST00000545026 EIF1AXP47813 144 aaKnown RBP10.82□□□□□ -0.68
LEMD3-206ENST00000545026 C1orf53Q5VUE5 145 aa10.82□□□□□ -0.68
LEMD3-206ENST00000545026 NPAS4Q8IUM7 802 aa10.82□□□□□ -0.68
LEMD3-206ENST00000545026 ASB16Q96NS5 453 aa10.82□□□□□ -0.68
LEMD3-206ENST00000545026 RBM47A0AV96 593 aaKnown RBP10.81□□□□□ -0.68
LEMD3-206ENST00000545026 ZBTB39O15060 712 aa10.81□□□□□ -0.68
LEMD3-206ENST00000545026 PLA2G4AP47712 749 aa10.81□□□□□ -0.68
LEMD3-206ENST00000545026 C11orf91Q3C1V1 193 aa10.81□□□□□ -0.68
LEMD3-206ENST00000545026 MRPL14Q6P1L8 145 aaKnown RBP10.81□□□□□ -0.68
LEMD3-206ENST00000545026 FAM187AA6NFU0 413 aa10.8□□□□□ -0.68
LEMD3-206ENST00000545026 BMP2P12643 396 aa10.8□□□□□ -0.68
LEMD3-206ENST00000545026 BRD2P25440 801 aaKnown RBP10.8□□□□□ -0.68
LEMD3-206ENST00000545026 DGKZQ13574 1117 aa10.8□□□□□ -0.68
LEMD3-206ENST00000545026 C6orf118Q5T5N4 469 aa10.8□□□□□ -0.68
LEMD3-206ENST00000545026 ALKBH2Q6NS38 261 aa10.8□□□□□ -0.68
LEMD3-206ENST00000545026 RNF217Q8TC41 542 aa10.8□□□□□ -0.68
LEMD3-206ENST00000545026 C7orf43Q8WVR3 580 aa10.8□□□□□ -0.68
LEMD3-206ENST00000545026 FZD6O60353 706 aa10.79□□□□□ -0.68
LEMD3-206ENST00000545026 ZSCAN29Q8IWY8 852 aaPredicted RBP10.79□□□□□ -0.68
LEMD3-206ENST00000545026 ABTB2Q8N961 1025 aa10.79□□□□□ -0.68
LEMD3-206ENST00000545026 RBCK1Q9BYM8 510 aa10.79□□□□□ -0.68
LEMD3-206ENST00000545026 KLK14Q9P0G3 267 aa10.79□□□□□ -0.68
LEMD3-206ENST00000545026 PHKA2P46019 1235 aa10.78□□□□□ -0.68
LEMD3-206ENST00000545026 ETFBKMTQ8IXQ9 262 aa10.78□□□□□ -0.68
LEMD3-206ENST00000545026 CCDC87Q9NVE4 849 aa10.78□□□□□ -0.68
LEMD3-206ENST00000545026 POU4F2Q12837 409 aa10.77□□□□□ -0.69
LEMD3-206ENST00000545026 NBPF10Q6P3W6 841 aaKnown RBP10.77□□□□□ -0.69
LEMD3-206ENST00000545026 PRICKLE2Q7Z3G6 844 aa10.77□□□□□ -0.69
LEMD3-206ENST00000545026 RGL4Q8IZJ4 473 aa10.77□□□□□ -0.69
LEMD3-206ENST00000545026 IFT43Q96FT9 208 aa10.77□□□□□ -0.69
LEMD3-206ENST00000545026 ZDHHC3Q9NYG2 299 aa10.77□□□□□ -0.69
LEMD3-206ENST00000545026 BRPF3Q9ULD4 1205 aa10.77□□□□□ -0.69
LEMD3-206ENST00000545026 NDUFB5O43674 189 aa10.76□□□□□ -0.69
LEMD3-206ENST00000545026 WDR44Q5JSH3 913 aa10.76□□□□□ -0.69
LEMD3-206ENST00000545026 TRIM46Q7Z4K8 759 aa10.76□□□□□ -0.69
LEMD3-206ENST00000545026 ATCAYQ86WG3 371 aa10.76□□□□□ -0.69
LEMD3-206ENST00000545026 AIDAQ96BJ3 306 aa10.76□□□□□ -0.69
LEMD3-206ENST00000545026 BMP1P13497 986 aa10.75□□□□□ -0.69
LEMD3-206ENST00000545026 SMCPP49901 116 aaPredicted RBP10.75□□□□□ -0.69
LEMD3-206ENST00000545026 AAMPQ13685 434 aa10.75□□□□□ -0.69
LEMD3-206ENST00000545026 NBPF1Q3BBV0 1214 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms