RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 ADAMTS7Q9UKP4 1686 aa21.62■■□□□ 1.05
PUDP-206ENST00000540122 DLEC1Q9Y238 1755 aa21.61■■□□□ 1.05
PUDP-206ENST00000540122 PASKQ96RG2 1323 aa21.6■■□□□ 1.05
PUDP-206ENST00000540122 SLC24A1O60721 1099 aa21.6■■□□□ 1.05
PUDP-206ENST00000540122 HSP90AB1P08238 724 aaKnown RBP21.6■■□□□ 1.05
PUDP-206ENST00000540122 MLLT1Q03111 559 aaPredicted RBP21.6■■□□□ 1.05
PUDP-206ENST00000540122 USPL1Q5W0Q7 1092 aa21.6■■□□□ 1.05
PUDP-206ENST00000540122 CCDC88AQ3V6T2 1871 aa21.6■■□□□ 1.05
PUDP-206ENST00000540122 ZPR1O75312 459 aa21.59■■□□□ 1.05
PUDP-206ENST00000540122 HSPA8P11142 646 aaKnown RBP21.59■■□□□ 1.05
PUDP-206ENST00000540122 CABP4P57796 275 aa21.59■■□□□ 1.05
PUDP-206ENST00000540122 NFIXQ14938 502 aa21.59■■□□□ 1.05
PUDP-206ENST00000540122 ERFEQ4G0M1 354 aa21.59■■□□□ 1.05
PUDP-206ENST00000540122 INTS5Q6P9B9 1019 aaKnown RBP21.59■■□□□ 1.05
PUDP-206ENST00000540122 C2CD5Q86YS7 1000 aa21.59■■□□□ 1.05
PUDP-206ENST00000540122 TJP1Q07157 1748 aa21.58■■□□□ 1.04
PUDP-206ENST00000540122 NRXN2Q9P2S2 1712 aa21.58■■□□□ 1.04
PUDP-206ENST00000540122 AFDNP55196 1824 aaKnown RBP21.57■■□□□ 1.04
PUDP-206ENST00000540122 TMEM88BA6NKF7 163 aa21.55■■□□□ 1.04
PUDP-206ENST00000540122 H0YIN7 160 aa21.55■■□□□ 1.04
PUDP-206ENST00000540122 DDNO94850 711 aaPredicted RBP21.55■■□□□ 1.04
PUDP-206ENST00000540122 RGS19P49795 217 aa21.55■■□□□ 1.04
PUDP-206ENST00000540122 CARMIL3Q8ND23 1372 aa21.55■■□□□ 1.04
PUDP-206ENST00000540122 VIRMAQ69YN4 1812 aaKnown RBP21.55■■□□□ 1.04
PUDP-206ENST00000540122 CCDC85CA6NKD9 419 aa21.54■■□□□ 1.04
PUDP-206ENST00000540122 SERPINB2P05120 415 aa21.54■■□□□ 1.04
PUDP-206ENST00000540122 LDHDQ86WU2 507 aa21.54■■□□□ 1.04
PUDP-206ENST00000540122 SOS1Q07889 1333 aaPredicted RBP21.54■■□□□ 1.04
PUDP-206ENST00000540122 EIF4A2Q14240 407 aaKnown RBP21.53■■□□□ 1.04
PUDP-206ENST00000540122 CARD14Q9BXL6 1004 aa21.53■■□□□ 1.04
PUDP-206ENST00000540122 ZNF530Q6P9A1 599 aaPredicted RBP21.52■■□□□ 1.04
PUDP-206ENST00000540122 C21orf2O43822 256 aa21.51■■□□□ 1.03
PUDP-206ENST00000540122 ITGBL1O95965 494 aaPredicted RBP21.51■■□□□ 1.03
PUDP-206ENST00000540122 PLEKHO1Q53GL0 409 aaPredicted RBP21.51■■□□□ 1.03
PUDP-206ENST00000540122 NFATC2IPQ8NCF5 419 aa21.51■■□□□ 1.03
PUDP-206ENST00000540122 ZNF219Q9P2Y4 722 aaPredicted RBP21.51■■□□□ 1.03
PUDP-206ENST00000540122 POLKQ9UBT6 870 aa21.51■■□□□ 1.03
PUDP-206ENST00000540122 NARFQ9UHQ1 456 aa21.51■■□□□ 1.03
PUDP-206ENST00000540122 DICER1Q9UPY3 1922 aaKnown RBP21.51■■□□□ 1.03
PUDP-206ENST00000540122 IQCA1LA6NCM1 817 aa21.5■■□□□ 1.03
PUDP-206ENST00000540122 BCL2L12Q9HB09 334 aa21.5■■□□□ 1.03
PUDP-206ENST00000540122 RASSF10A6NK89 507 aa21.49■■□□□ 1.03
PUDP-206ENST00000540122 MTHFSP49914 203 aa21.49■■□□□ 1.03
PUDP-206ENST00000540122 MAP2K1Q02750 393 aaPredicted RBP21.49■■□□□ 1.03
PUDP-206ENST00000540122 DNAJC10Q8IXB1 793 aa21.49■■□□□ 1.03
PUDP-206ENST00000540122 TAOK3Q9H2K8 898 aa21.49■■□□□ 1.03
PUDP-206ENST00000540122 TAF1DQ9H5J8 278 aaPredicted RBP21.49■■□□□ 1.03
PUDP-206ENST00000540122 LTBP3Q9NS15 1303 aa21.49■■□□□ 1.03
PUDP-206ENST00000540122 COL15A1P39059 1388 aa21.48■■□□□ 1.03
PUDP-206ENST00000540122 ZNF622Q969S3 477 aaKnown RBP eCLIP21.48■■□□□ 1.03
PUDP-206ENST00000540122 FER1L6Q2WGJ9 1857 aa21.47■■□□□ 1.03
PUDP-206ENST00000540122 DEFB115Q30KQ5 88 aa21.47■■□□□ 1.03
PUDP-206ENST00000540122 L3MBTL3Q96JM7 780 aaPredicted RBP21.47■■□□□ 1.03
PUDP-206ENST00000540122 AMOTQ4VCS5 1084 aa21.46■■□□□ 1.03
PUDP-206ENST00000540122 WDR33Q9C0J8 1336 aaKnown RBP21.46■■□□□ 1.03
PUDP-206ENST00000540122 CYP19A1P11511 503 aaPredicted RBP21.45■■□□□ 1.02
PUDP-206ENST00000540122 EAPPQ56P03 285 aaPredicted RBP21.44■■□□□ 1.02
PUDP-206ENST00000540122 C1orf141Q5JVX7 400 aa21.44■■□□□ 1.02
PUDP-206ENST00000540122 BICDL1Q6ZP65 573 aa21.43■■□□□ 1.02
PUDP-206ENST00000540122 ZBTB1Q9Y2K1 713 aa21.43■■□□□ 1.02
PUDP-206ENST00000540122 SCN4AP35499 1836 aa21.43■■□□□ 1.02
PUDP-206ENST00000540122 COL11A2P13942 1736 aaPredicted RBP21.42■■□□□ 1.02
PUDP-206ENST00000540122 ANKRD31Q8N7Z5 1873 aa21.42■■□□□ 1.02
PUDP-206ENST00000540122 PDZRN3Q9UPQ7 1066 aa21.42■■□□□ 1.02
PUDP-206ENST00000540122 PDE6BP35913 854 aa21.41■■□□□ 1.02
PUDP-206ENST00000540122 BRIP1Q9BX63 1249 aa21.41■■□□□ 1.02
PUDP-206ENST00000540122 CLEC11AQ9Y240 323 aa21.41■■□□□ 1.02
PUDP-206ENST00000540122 ADAMTSL1Q8N6G6 1762 aa21.41■■□□□ 1.02
PUDP-206ENST00000540122 CDCA8Q53HL2 280 aa21.4■■□□□ 1.02
PUDP-206ENST00000540122 ABT1Q9ULW3 272 aaKnown RBP21.4■■□□□ 1.02
PUDP-206ENST00000540122 CCDC24Q8N4L8 307 aa21.39■■□□□ 1.01
PUDP-206ENST00000540122 HACL1Q9UJ83 578 aa21.39■■□□□ 1.01
PUDP-206ENST00000540122 THSD7BQ9C0I4 1608 aa21.39■■□□□ 1.01
PUDP-206ENST00000540122 TNNT2P45379 298 aaPredicted RBP21.38■■□□□ 1.01
PUDP-206ENST00000540122 MAP1SQ66K74 1059 aaPredicted RBP21.38■■□□□ 1.01
PUDP-206ENST00000540122 AEBP1Q8IUX7 1158 aa21.38■■□□□ 1.01
PUDP-206ENST00000540122 CNTROBQ8N137 903 aa21.38■■□□□ 1.01
PUDP-206ENST00000540122 CFAP44Q96MT7 982 aa21.38■■□□□ 1.01
PUDP-206ENST00000540122 ZNF541Q9H0D2 1346 aa21.37■■□□□ 1.01
PUDP-206ENST00000540122 EPHX2P34913 555 aa21.37■■□□□ 1.01
PUDP-206ENST00000540122 PRR5LQ6MZQ0 368 aa21.37■■□□□ 1.01
PUDP-206ENST00000540122 PRPF40BQ6NWY9 871 aaKnown RBP21.37■■□□□ 1.01
PUDP-206ENST00000540122 SOGA3Q5TF21 947 aa21.36■■□□□ 1.01
PUDP-206ENST00000540122 TBC1D9BQ66K14 1250 aa21.36■■□□□ 1.01
PUDP-206ENST00000540122 CNKSR1Q969H4 720 aa21.36■■□□□ 1.01
PUDP-206ENST00000540122 BEGAINQ9BUH8 593 aa21.36■■□□□ 1.01
PUDP-206ENST00000540122 SLX4Q8IY92 1834 aa21.35■■□□□ 1.01
PUDP-206ENST00000540122 SLC52A2Q9HAB3 445 aa21.35■■□□□ 1.01
PUDP-206ENST00000540122 SCN11AQ9UI33 1791 aa21.34■■□□□ 1.01
PUDP-206ENST00000540122 CANXP27824 592 aaKnown RBP21.34■■□□□ 1.01
PUDP-206ENST00000540122 SLC39A6Q13433 755 aa21.34■■□□□ 1.01
PUDP-206ENST00000540122 STYK1Q6J9G0 422 aa21.34■■□□□ 1.01
PUDP-206ENST00000540122 PNMA8AQ86V59 439 aaPredicted RBP21.34■■□□□ 1.01
PUDP-206ENST00000540122 CAPNS2Q96L46 248 aa21.34■■□□□ 1.01
PUDP-206ENST00000540122 MCOLN1Q9GZU1 580 aa21.33■■□□□ 1.01
PUDP-206ENST00000540122 TSKSQ9UJT2 592 aa21.33■■□□□ 1.01
PUDP-206ENST00000540122 TNRC18O15417 2968 aaPredicted RBP21.33■■□□□ 1
PUDP-206ENST00000540122 RNF123Q5XPI4 1314 aa21.32■■□□□ 1
PUDP-206ENST00000540122 ECE1P42892 770 aa21.32■■□□□ 1
PUDP-206ENST00000540122 PAXIP1Q6ZW49 1069 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms