RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 CDK2AP1O14519 115 aa5.39□□□□□ -1.55
SNHG1-210ENST00000539303 RANGAP1P46060 587 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-210ENST00000539303 PSMA6P60900 246 aaKnown RBP5.39□□□□□ -1.55
SNHG1-210ENST00000539303 C16orf46Q6P387 395 aa5.39□□□□□ -1.55
SNHG1-210ENST00000539303 VTI1AQ96AJ9 217 aa5.39□□□□□ -1.55
SNHG1-210ENST00000539303 CABP1Q9NZU7 370 aa5.39□□□□□ -1.55
SNHG1-210ENST00000539303 HCN4Q9Y3Q4 1203 aa5.39□□□□□ -1.55
SNHG1-210ENST00000539303 ANKRD33BA6NCL7 494 aa5.38□□□□□ -1.55
SNHG1-210ENST00000539303 ZBTB39O15060 712 aa5.38□□□□□ -1.55
SNHG1-210ENST00000539303 MAPK1P28482 360 aa5.38□□□□□ -1.55
SNHG1-210ENST00000539303 CTSOP43234 321 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-210ENST00000539303 TAGLNQ01995 201 aaKnown RBP5.38□□□□□ -1.55
SNHG1-210ENST00000539303 NPAS4Q8IUM7 802 aa5.38□□□□□ -1.55
SNHG1-210ENST00000539303 L3MBTL2Q969R5 705 aa5.38□□□□□ -1.55
SNHG1-210ENST00000539303 NLRP3Q96P20 1036 aa5.38□□□□□ -1.55
SNHG1-210ENST00000539303 ZNF232Q9UNY5 417 aa5.38□□□□□ -1.55
SNHG1-210ENST00000539303 SERTM1A2A2V5 107 aa5.37□□□□□ -1.55
SNHG1-210ENST00000539303 NOS2P35228 1153 aa5.37□□□□□ -1.55
SNHG1-210ENST00000539303 TXLNAP40222 546 aa5.37□□□□□ -1.55
SNHG1-210ENST00000539303 PRR20EP86478 221 aa5.37□□□□□ -1.55
SNHG1-210ENST00000539303 PRR20CP86479 221 aa5.37□□□□□ -1.55
SNHG1-210ENST00000539303 PRR20DP86480 221 aa5.37□□□□□ -1.55
SNHG1-210ENST00000539303 PRR20BP86481 221 aa5.37□□□□□ -1.55
SNHG1-210ENST00000539303 PRR20AP86496 221 aa5.37□□□□□ -1.55
SNHG1-210ENST00000539303 SF3B2Q13435 895 aaKnown RBP5.37□□□□□ -1.55
SNHG1-210ENST00000539303 TEAD4Q15561 434 aa5.37□□□□□ -1.55
SNHG1-210ENST00000539303 POTEAQ6S8J7 498 aa5.37□□□□□ -1.55
SNHG1-210ENST00000539303 ATCAYQ86WG3 371 aa5.37□□□□□ -1.55
SNHG1-210ENST00000539303 PPARGC1BQ86YN6 1023 aaKnown RBP5.37□□□□□ -1.55
SNHG1-210ENST00000539303 ALDH16A1Q8IZ83 802 aa5.37□□□□□ -1.55
SNHG1-210ENST00000539303 STAG2Q8N3U4 1231 aa5.37□□□□□ -1.55
SNHG1-210ENST00000539303 TRIM52Q96A61 297 aa5.37□□□□□ -1.55
SNHG1-210ENST00000539303 ZSCAN10Q96SZ4 725 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-210ENST00000539303 PHACTR1Q9C0D0 580 aa5.37□□□□□ -1.55
SNHG1-210ENST00000539303 KLK14Q9P0G3 267 aa5.37□□□□□ -1.55
SNHG1-210ENST00000539303 BMP1P13497 986 aa5.36□□□□□ -1.55
SNHG1-210ENST00000539303 NPR3P17342 541 aa5.36□□□□□ -1.55
SNHG1-210ENST00000539303 PHKA2P46019 1235 aa5.36□□□□□ -1.55
SNHG1-210ENST00000539303 PLA2G4AP47712 749 aa5.36□□□□□ -1.55
SNHG1-210ENST00000539303 C4orf17Q53FE4 359 aa5.36□□□□□ -1.55
SNHG1-210ENST00000539303 C6orf118Q5T5N4 469 aa5.36□□□□□ -1.55
SNHG1-210ENST00000539303 TMEM214Q6NUQ4 689 aaKnown RBP5.36□□□□□ -1.55
SNHG1-210ENST00000539303 LINC00528Q8N1L1 170 aa5.36□□□□□ -1.55
SNHG1-210ENST00000539303 GRIP2Q9C0E4 1043 aa5.36□□□□□ -1.55
SNHG1-210ENST00000539303 POLMQ9NP87 494 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-210ENST00000539303 CCDC87Q9NVE4 849 aa5.36□□□□□ -1.55
SNHG1-210ENST00000539303 CAPN5O15484 640 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-210ENST00000539303 FZD6O60353 706 aa5.35□□□□□ -1.55
SNHG1-210ENST00000539303 EIF1AXP47813 144 aaKnown RBP5.35□□□□□ -1.55
SNHG1-210ENST00000539303 DGKZQ13574 1117 aa5.35□□□□□ -1.55
SNHG1-210ENST00000539303 SLC27A3Q5K4L6 730 aa5.35□□□□□ -1.55
SNHG1-210ENST00000539303 ETFBKMTQ8IXQ9 262 aa5.35□□□□□ -1.55
SNHG1-210ENST00000539303 NBPF15Q8N660 670 aa5.35□□□□□ -1.55
SNHG1-210ENST00000539303 RHBDD1Q8TEB9 315 aa5.35□□□□□ -1.55
SNHG1-210ENST00000539303 DCTN4Q9UJW0 460 aa5.35□□□□□ -1.55
SNHG1-210ENST00000539303 SPINT1O43278 529 aa5.34□□□□□ -1.55
SNHG1-210ENST00000539303 FAM13AO94988 1023 aa5.34□□□□□ -1.55
SNHG1-210ENST00000539303 HIRAP54198 1017 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-210ENST00000539303 TMC7Q7Z402 723 aa5.34□□□□□ -1.55
SNHG1-210ENST00000539303 MYO19Q96H55 970 aa5.34□□□□□ -1.55
SNHG1-210ENST00000539303 ASB16Q96NS5 453 aa5.34□□□□□ -1.55
SNHG1-210ENST00000539303 TSEN34Q9BSV6 310 aaKnown RBP5.34□□□□□ -1.55
SNHG1-210ENST00000539303 BCL2L13Q9BXK5 485 aa5.34□□□□□ -1.55
SNHG1-210ENST00000539303 NIFKQ9BYG3 293 aaKnown RBP5.34□□□□□ -1.55
SNHG1-210ENST00000539303 STIM2Q9P246 746 aa5.34□□□□□ -1.55
SNHG1-210ENST00000539303 PDZRN3Q9UPQ7 1066 aa5.34□□□□□ -1.55
SNHG1-210ENST00000539303 BCS1LQ9Y276 419 aa5.34□□□□□ -1.55
SNHG1-210ENST00000539303 AMOTL2Q9Y2J4 779 aa5.34□□□□□ -1.55
SNHG1-210ENST00000539303 RBM47A0AV96 593 aaKnown RBP5.33□□□□□ -1.56
SNHG1-210ENST00000539303 FAM187AA6NFU0 413 aa5.33□□□□□ -1.56
SNHG1-210ENST00000539303 BMP2P12643 396 aa5.33□□□□□ -1.56
SNHG1-210ENST00000539303 ZNF16P17020 682 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-210ENST00000539303 RHOQP17081 205 aa5.33□□□□□ -1.56
SNHG1-210ENST00000539303 RNF144AP50876 292 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-210ENST00000539303 POU4F2Q12837 409 aa5.33□□□□□ -1.56
SNHG1-210ENST00000539303 PRICKLE2Q7Z3G6 844 aa5.33□□□□□ -1.56
SNHG1-210ENST00000539303 RNF217Q8TC41 542 aa5.33□□□□□ -1.56
SNHG1-210ENST00000539303 GIPC2Q8TF65 315 aa5.33□□□□□ -1.56
SNHG1-210ENST00000539303 AIDAQ96BJ3 306 aa5.33□□□□□ -1.56
SNHG1-210ENST00000539303 CHMP3Q9Y3E7 222 aa5.33□□□□□ -1.56
SNHG1-210ENST00000539303 GPR182O15218 404 aa5.32□□□□□ -1.56
SNHG1-210ENST00000539303 AAMPQ13685 434 aa5.32□□□□□ -1.56
SNHG1-210ENST00000539303 RTN1Q16799 776 aa5.32□□□□□ -1.56
SNHG1-210ENST00000539303 MRPL14Q6P1L8 145 aaKnown RBP5.32□□□□□ -1.56
SNHG1-210ENST00000539303 TRIM46Q7Z4K8 759 aa5.32□□□□□ -1.56
SNHG1-210ENST00000539303 FBXO33Q7Z6M2 555 aa5.32□□□□□ -1.56
SNHG1-210ENST00000539303 ZNF280CQ8ND82 737 aa5.32□□□□□ -1.56
SNHG1-210ENST00000539303 C7orf43Q8WVR3 580 aa5.32□□□□□ -1.56
SNHG1-210ENST00000539303 HSH2DQ96JZ2 352 aa5.32□□□□□ -1.56
SNHG1-210ENST00000539303 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.32□□□□□ -1.56
SNHG1-210ENST00000539303 KIAA1522Q9P206 1035 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-210ENST00000539303 FIGNL2A6NMB9 653 aa5.31□□□□□ -1.56
SNHG1-210ENST00000539303 IGHA2P01877 340 aa5.31□□□□□ -1.56
SNHG1-210ENST00000539303 P4HBP07237 508 aaKnown RBP5.31□□□□□ -1.56
SNHG1-210ENST00000539303 ATP4AP20648 1035 aa5.31□□□□□ -1.56
SNHG1-210ENST00000539303 BRD2P25440 801 aaKnown RBP5.31□□□□□ -1.56
SNHG1-210ENST00000539303 GPC1P35052 558 aa5.31□□□□□ -1.56
SNHG1-210ENST00000539303 C11orf91Q3C1V1 193 aa5.31□□□□□ -1.56
SNHG1-210ENST00000539303 GNASQ5JWF2 1037 aa5.31□□□□□ -1.56
SNHG1-210ENST00000539303 RGL4Q8IZJ4 473 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms